| Clone Name | baet100c08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 192 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 251 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 252 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 311 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 312 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 371 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 372 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 431 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 491 Query: 506 acc 508 ||| Sbjct: 492 acc 494 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 37 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 96 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 97 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 146
>ref|XM_478692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 187 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 246 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 247 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 306 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 307 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 366 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 367 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 426 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 486 Query: 506 acc 508 ||| Sbjct: 487 acc 489 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 32 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 91 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 92 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 141
>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1162 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 493 Query: 506 acc 508 ||| Sbjct: 494 acc 496 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1183 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 493 Query: 506 acc 508 ||| Sbjct: 494 acc 496 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1221 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 208 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 267 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 268 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 327 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 328 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 387 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 388 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 447 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 507 Query: 506 acc 508 ||| Sbjct: 508 acc 510 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 53 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 112 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 113 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 162
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Minus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 22264149 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 22264090 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 22264089 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 22264030 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 22264029 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 22263970 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 22263969 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 22263910 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22263909 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 22263850 Query: 506 acc 508 ||| Sbjct: 22263849 acc 22263847 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 22264304 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 22264245 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 22264244 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 22264195
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Minus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 69395 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 69336 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 69335 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 69276 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 69275 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 69216 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 69215 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 69156 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69155 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 69096 Query: 506 acc 508 ||| Sbjct: 69095 acc 69093 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 69550 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 69491 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 69490 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 69441
>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full insert sequence Length = 1234 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 493 Query: 506 acc 508 ||| Sbjct: 494 acc 496 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full insert sequence Length = 1152 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 187 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 246 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 247 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 306 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 307 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 366 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 367 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 426 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 486 Query: 506 acc 508 ||| Sbjct: 487 acc 489 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 32 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 91 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 92 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 141
>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full insert sequence Length = 1169 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 201 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 260 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 261 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 320 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 321 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 380 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 381 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 440 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 500 Query: 506 acc 508 ||| Sbjct: 501 acc 503 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 46 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 105 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 106 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 155
>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full insert sequence Length = 1183 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 493 Query: 506 acc 508 ||| Sbjct: 494 acc 496 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>dbj|AK098992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H13, full insert sequence Length = 1156 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 192 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 251 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 252 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 311 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 312 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 371 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 372 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 431 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 491 Query: 506 acc 508 ||| Sbjct: 492 acc 494 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 37 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 96 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 97 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 146
>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full insert sequence Length = 1221 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 208 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 267 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 268 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 327 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 328 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 387 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 388 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 447 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 507 Query: 506 acc 508 ||| Sbjct: 508 acc 510 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 53 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 112 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 113 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 162
>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete cds Length = 1178 Score = 347 bits (175), Expect = 2e-92 Identities = 271/303 (89%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||||||||||| |||||| || ||||| ||||| Sbjct: 192 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 251 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 252 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 311 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 312 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 371 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 372 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 431 Query: 446 ttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 505 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 ttcggcctccagcgcttccgcgagtgcgagctcatccacggccgctgggccatgctcgcc 491 Query: 506 acc 508 ||| Sbjct: 492 acc 494 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 37 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 96 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 97 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 146
>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29 Length = 1162 Score = 321 bits (162), Expect = 1e-84 Identities = 261/294 (88%) Strand = Plus / Plus Query: 215 gaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggcacgctcgtc 274 |||||||||||||||||||||||||| ||||||||| ||||| |||||| |||| ||| Sbjct: 170 gaccggccgctgtggttccccggcgccgtggcgcccgactacctggacggctcgctggtc 229 Query: 275 ggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctgcagtacgac 334 ||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||| Sbjct: 230 ggcgactacgggttcgacccgttcggtctcgggaagcccgtggagtacctgcagttcgag 289 Query: 335 gtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatcggcacccgg 394 ||||||| |||||||||||||| ||| |||| ||| || | ||||||||||||||| Sbjct: 290 ttggactcgctggaccagaacctggccaagaatgaggccggcggcatcatcggcacccgg 349 Query: 395 ttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtgttcggcctc 454 |||||| | |||| ||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 350 ttcgagtcctccgaagtcaagtccaccccgttgcagccctacagcgaggtgttcggcctc 409 Query: 455 cagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgccacc 508 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 cagcggttccgcgagtgcgagctcatccacggccgctgggccatgctcgccacc 463 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 64 agccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctggcgga 123 |||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||||||| Sbjct: 7 agccatggcttcatcggtggccgccgcggcgagcacattcctgggcacccgcctggcgga 66 Query: 124 cccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcgg 168 ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 67 cccggcgccacagaacgggcgcatcgtggcccggttcgggttcgg 111
>gb|AY103995.1| Zea mays PCO102677 mRNA sequence Length = 1225 Score = 307 bits (155), Expect = 2e-80 Identities = 261/295 (88%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 215 gaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggcacgctcgtc 274 |||||||||||||||||||||||||| ||||||||| ||||| |||||| |||| ||| Sbjct: 214 gaccggccgctgtggttccccggcgccgtggcgcccgactacctggacggctcgctggtc 273 Query: 275 ggcgactacggcttcgaccccttcggcctcgggaagcccgcgg-agtacctgcagtacga 333 ||||||||||| |||||||| ||||| ||||||||||||| || |||||||||||| ||| Sbjct: 274 ggcgactacgggttcgacccgttcggtctcgggaagcccgtgggagtacctgcagttcga 333 Query: 334 cgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatcggcacccg 393 ||||||| |||||||||||||| ||| |||| ||| || | |||||||||||||| Sbjct: 334 gttggactcgctggaccagaacctggccaagaatgaggccggcggcatcatcggcacccg 393 Query: 394 gttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtgttcggcct 453 ||||||| | |||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 394 gttcgagtcctccgaagtcaagtccaccccgttgcagccctacagcgaggtgttcggcct 453 Query: 454 ccagaggttccgcgagtgcgagctcatccacggccgctgggccatgctcgccacc 508 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ccagcggttccgcgagtgcgagctcatccacggccgctgggccatgctcgccacc 508 Score = 153 bits (77), Expect = 7e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 |||||||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||| Sbjct: 47 gagcagccatggcttcatcggtggccgccgcggcgagcacattcctgggcacccgcctgg 106 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcgg 168 ||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 107 cggacccggcgccacagaacgggcgcatcgtggcccggttcgggttcgg 155
>gb|AF139466.2|AF139466 Vigna radiata chlorophyll a/b binding protein CP29 (CipCp29) mRNA, complete cds; nuclear gene for chloroplast product Length = 1118 Score = 192 bits (97), Expect = 8e-46 Identities = 241/289 (83%) Strand = Plus / Plus Query: 219 ggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggcacgctcgtcggcg 278 ||||| |||||| |||||||||| ||||||| |||| || ||||| | || ||||| | Sbjct: 221 ggccgttgtggtaccccggcgcgaaggcgccggagtggctggacgggagccttgtcggtg 280 Query: 279 actacggcttcgaccccttcggcctcgggaagcccgcggagtacctgcagtacgacgtgg 338 ||||||| |||||||| ||||| |||||||||||||||||||| |||||| || ||| Sbjct: 281 actacgggttcgacccgttcgggctcgggaagcccgcggagtatttgcagtttgaactgg 340 Query: 339 actccctggaccagaaccttgcccagaacctggcgggtgagatcatcggcacccggttcg 398 |||| |||||||||||||| ||| ||||| ||| || |||||||| ||| || | Sbjct: 341 actcgctggaccagaacctggccaagaacgaggccgggatcatcatcggaaccaggacag 400 Query: 399 aggacgccgacgtcaagtccaccccgttccagccctacgcggaggtgttcggcctccaga 458 ||| || ||||| ||||| || ||||||||||||||| ||||| ||||||||||||| Sbjct: 401 aggttgcggacgtgaagtcgacgccgttccagccctacagcgaggtcttcggcctccaga 460 Query: 459 ggttccgcgagtgcgagctcatccacggccgctgggccatgctcgccac 507 ||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 461 ggttccgcgagtgcgagctcatccatggacgctgggccatgctcgccac 509
>emb|Y10786.1|SSY10786 S.stapfianus pSD.76 mRNA Length = 332 Score = 141 bits (71), Expect = 3e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 213 ccgaccggccgctgtggttccccggcgcgcaggcgcccgagtacctcgacggcacgctcg 272 |||||||||||||||||||||| |||||| |||||||||| ||||||||||| || | Sbjct: 187 ccgaccggccgctgtggttcccgggcgcgaaggcgcccgactacctcgacgggacctatg 246 Query: 273 tcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctgcagtacg 332 | ||||||||||| |||||||| | || ||||||||||||| |||||||||||||| || Sbjct: 247 tgggcgactacgggttcgacccgtgggggctcgggaagcccgtggagtacctgcagttcg 306 Query: 333 acgtggactccctggaccagaac 355 || ||||||| |||||||||||| Sbjct: 307 acctggactcgctggaccagaac 329 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 86 gccgcggcgagcacgttcctcgggacccggctggcggacccggcgccgcagaacgggcgc 145 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 54 gccgcggcgagcacgttcctcgggacccgcctggcggacccggcgccccagaacgggcgc 113 Query: 146 atcgtggcgcggttcggcttcggcaagaag 175 ||||||||||||||| |||||||||||| Sbjct: 114 atcgtggcgcggttcccgttcggcaagaag 143
>gb|AY171230.1| Chlamydomonas reinhardtii CP29-like protein (Lhcb4) mRNA, complete cds; nuclear gene for chloroplast product Length = 1382 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 431 ccctacgcggaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgc 490 |||||| |||||||||||||||| | ||||||||||||||||| || ||||||||| Sbjct: 382 ccctactcggaggtgttcggcctggctcgcttccgcgagtgcgagctgattcacggccgc 441 Query: 491 tgggccatgct 501 ||||||||||| Sbjct: 442 tgggccatgct 452
>dbj|AB051211.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein Lhcb4, complete cds Length = 1411 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 431 ccctacgcggaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgc 490 |||||| |||||||||||||||| | ||||||||||||||||| || ||||||||| Sbjct: 420 ccctactcggaggtgttcggcctggctcgcttccgcgagtgcgagctgattcacggccgc 479 Query: 491 tgggccatgct 501 ||||||||||| Sbjct: 480 tgggccatgct 490
>dbj|AB051207.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein Lhcb4, complete cds Length = 1607 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 431 ccctacgcggaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgc 490 |||||| |||||||||||||||| | ||||||||||||||||| || ||||||||| Sbjct: 759 ccctactcggaggtgttcggcctggctcgcttccgcgagtgcgagctgattcacggccgc 818 Query: 491 tgggccatgct 501 ||||||||||| Sbjct: 819 tgggccatgct 829
>gb|AY954735.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca3 gene, complete cds; nuclear gene for chloroplast product Length = 1113 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 472 cgagctcatccacggccgctgggccatgctcg 503 |||||||||||||||||||||||| ||||||| Sbjct: 579 cgagctcatccacggccgctgggcgatgctcg 610
>ref|NM_120231.3| Arabidopsis thaliana chlorophyll binding AT5G01530 mRNA, complete cds Length = 1222 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 532 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 591 Query: 500 ctcgc 504 ||||| Sbjct: 592 ctcgc 596
>gb|AY954738.1| Ostreococcus tauri chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5 gene, complete cds; nuclear gene for chloroplast product Length = 1445 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 254 tacctcgacggcacgctcgtcggcgactacggcttcgaccccttcggcctcgg 306 ||||||||||| ||||||| || ||||||||||| ||||| |||||||||| Sbjct: 837 tacctcgacggtacgctcgcgggtgactacggctttgacccgctcggcctcgg 889
>gb|AY954731.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp1 gene, partial cds; nuclear gene for chloroplast product Length = 633 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 471 gcgagctcatccacggccgctgggccatgctcg 503 ||||| ||||||||||||| ||||||||||||| Sbjct: 113 gcgagatcatccacggccgatgggccatgctcg 145
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgct 501 ||||||||||||||||||||||||| Sbjct: 5820 tcatccacggccgctgggccatgct 5844 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 463 ccgcgagtgcgagctcatccacggccgctgggccatgct 501 ||||||| |||| ||||||||| ||||||||||||||| Sbjct: 4510 ccgcgaggccgaggtcatccacgcccgctgggccatgct 4548 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 463 ccgcgagtgcgagctcatccacggccgctgggccatgct 501 ||||||| |||| ||||||||| ||||||||||||||| Sbjct: 1067 ccgcgaggccgaggtcatccacgcccgctgggccatgct 1105
>gb|BT000363.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 966 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 385 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 444 Query: 500 ctcgc 504 ||||| Sbjct: 445 ctcgc 449
>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project) Length = 86690 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 17127 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 17186 Query: 500 ctcgc 504 ||||| Sbjct: 17187 ctcgc 17191
>gb|AY133566.1| Arabidopsis thaliana At5g01530/F7A7_50 mRNA, complete cds Length = 873 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 385 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 444 Query: 500 ctcgc 504 ||||| Sbjct: 445 ctcgc 449
>gb|AY092980.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 1094 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 420 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 479 Query: 500 ctcgc 504 ||||| Sbjct: 480 ctcgc 484
>gb|AY081680.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 947 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 385 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 444 Query: 500 ctcgc 504 ||||| Sbjct: 445 ctcgc 449
>gb|AY059861.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530; F7A7_50) mRNA, complete cds Length = 1023 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 421 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 480 Query: 500 ctcgc 504 ||||| Sbjct: 481 ctcgc 485
>gb|AY057641.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 1113 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 420 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 479 Query: 500 ctcgc 504 ||||| Sbjct: 480 ctcgc 484
>gb|AY048300.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 1074 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 422 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 481 Query: 500 ctcgc 504 ||||| Sbjct: 482 ctcgc 486
>gb|AY048262.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 995 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 415 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 474 Query: 500 ctcgc 504 ||||| Sbjct: 475 ctcgc 479
>gb|AF370474.1|AF370474 Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (F7A7_50) mRNA, complete cds Length = 1064 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 445 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 504 Query: 500 ctcgc 504 ||||| Sbjct: 505 ctcgc 509
>emb|BX833597.1|CNS0A1R6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 970 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 406 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 465 Query: 500 ctcgc 504 ||||| Sbjct: 466 ctcgc 470
>emb|BX831442.1|CNS0A1WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 954 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 390 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 449 Query: 500 ctcgc 504 ||||| Sbjct: 450 ctcgc 454
>emb|BX830127.1|CNS0A1XL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 383 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 442 Query: 500 ctcgc 504 ||||| Sbjct: 443 ctcgc 447
>emb|BX830573.1|CNS0A06T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZH03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1043 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 509 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 568 Query: 500 ctcgc 504 ||||| Sbjct: 569 ctcgc 573
>emb|BX831299.1|CNS09ZIA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 407 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 466 Query: 500 ctcgc 504 ||||| Sbjct: 467 ctcgc 471
>emb|BX831064.1|CNS09ZJ3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1077 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 406 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 465 Query: 500 ctcgc 504 ||||| Sbjct: 466 ctcgc 470
>emb|BX830905.1|CNS09ZE8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 406 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 465 Query: 500 ctcgc 504 ||||| Sbjct: 466 ctcgc 470
>emb|BX830685.1|CNS09ZE5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 940 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 406 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 465 Query: 500 ctcgc 504 ||||| Sbjct: 466 ctcgc 470
>emb|BX841630.1|CNS09YKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1015 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 406 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 465 Query: 500 ctcgc 504 ||||| Sbjct: 466 ctcgc 470
>emb|X71878.1|ATLHCB4 A.thaliana Lhcb4 gene Length = 2100 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 440 gaggtgttcggcctccagaggttccgcgagtgcgagctcatccacggccgctgggccatg 499 ||||||||||| ||||||| ||| | || ||||| ||||||||||| || ||||| ||| Sbjct: 1228 gaggtgttcggaatccagagattcagggaatgcgaactcatccacggacggtgggcgatg 1287 Query: 500 ctcgc 504 ||||| Sbjct: 1288 ctcgc 1292
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cgagtgcgagctcatccacggccgctgggccatgct 501 |||| ||||| |||||||||| |||||||||||||| Sbjct: 271 cgagagcgaggtcatccacggtcgctgggccatgct 306
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cgagtgcgagctcatccacggccgctgggccatgct 501 |||| ||||| |||||||||| |||||||||||||| Sbjct: 266 cgagagcgaggtcatccacggtcgctgggccatgct 301
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 466 cgagtgcgagctcatccacggccgctgggccatgct 501 |||| ||||| |||||||||| |||||||||||||| Sbjct: 220 cgagagcgaggtcatccacggtcgctgggccatgct 255
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgctcg 503 ||||| ||||||| ||||||||||||||||| Sbjct: 288 gagctgatccacgcccgctgggccatgctcg 318
>gb|AY267625.1| Bigelowiella natans chlorophyll a/b-binding protein CP29 mRNA, complete cds; nuclear gene for plastid product Length = 1031 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 461 ttccgcgagtgcgagctcatccacggccgctgggccatgctcgccac 507 ||||| |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct: 462 ttccgtgagtgcgaactcatccacggacgttgggctatgcttgccac 508
>emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin Length = 2336 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 473 gagctcatccacggccgctgggccatgctcg 503 ||||| ||||||| ||||||||||||||||| Sbjct: 134 gagctgatccacgcccgctgggccatgctcg 104
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgctcg 503 ||||| ||||||| ||||||||||||||||| Sbjct: 848 gagctgatccacgcccgctgggccatgctcg 878
>dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene for light-harvesting chlorophyll a/b-binding protein 1, complete cds Length = 1975 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgctcg 503 ||||||||| ||||||||||||||||| Sbjct: 1350 tcatccacgcccgctgggccatgctcg 1376
>emb|Z22782.1|MSCHLABA M.squamata chlorophyll a/b binding protein mRNA Length = 900 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgctcg 503 ||||||||||||||||||| ||||||| Sbjct: 222 tcatccacggccgctgggctatgctcg 248
>emb|X69524.1|MSCABC1 M.squamata cabc1 mRNA for chlorophyll a/b/c binding protein precursor Length = 882 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgctcg 503 ||||||||||||||||||| ||||||| Sbjct: 252 tcatccacggccgctgggctatgctcg 278
>emb|X73540.1|MSLHC13 M.squamata Lhc1*3 mRNA for chlorophyll a/b/c binding precursor Length = 829 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgctcg 503 ||||||||||||||||||| ||||||| Sbjct: 171 tcatccacggccgctgggctatgctcg 197
>emb|X73539.1|MSLHC14 M.squamata Lhc1*4 mRNA for chlorophyll a/b/c binding precursor Length = 903 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgctcg 503 ||||||||||||||||||| ||||||| Sbjct: 209 tcatccacggccgctgggctatgctcg 235
>gb|L15738.1|MNTCPCABBP Mantoniella squamata chloroplast photosynthetic light-harvesting protein mRNA, complete cds Length = 900 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 477 tcatccacggccgctgggccatgctcg 503 ||||||||||||||||||| ||||||| Sbjct: 222 tcatccacggccgctgggctatgctcg 248
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgctcg 503 ||||| ||||||| ||||||||||||||||| Sbjct: 272 gagctgatccacgcccgctgggccatgctcg 302
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 463 ccgcgagtgcgagctcatccacggccgctgggccatgct 501 |||||||| ||||| ||||||| ||||||||||||||| Sbjct: 274 ccgcgagttggagctgatccacgcccgctgggccatgct 312
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgctcg 503 ||||| ||||||| ||||||||||||||||| Sbjct: 761 gagctgatccacgcccgctgggccatgctcg 791
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 463 ccgcgagtgcgagctcatccacggccgctgggccatgct 501 |||||||| ||||| ||||||| ||||||||||||||| Sbjct: 722 ccgcgagttggagctgatccacgcccgctgggccatgct 760
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 tcgtcggtggccgccgcggcgagcac 99 ||||||||||||| |||||||||||| Sbjct: 2881901 tcgtcggtggccgacgcggcgagcac 2881876
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 472 cgagctcatccacggccgctgggccatgct 501 |||| ||||||||| ||||||||||||||| Sbjct: 48 cgaggtcatccacgcccgctgggccatgct 77
>ref|XM_960770.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_0290) partial mRNA Length = 447 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 cgcacgcaaaggccgaggagga 39 |||||||||||||||||||||| Sbjct: 71 cgcacgcaaaggccgaggagga 92
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 atggcttcgtcggtggccgccgcggcgagc 97 |||||||||||| ||||||| ||||||||| Sbjct: 1698526 atggcttcgtcgttggccgcggcggcgagc 1698497
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 cgcacgcaaaggccgaggagga 39 |||||||||||||||||||||| Sbjct: 43884 cgcacgcaaaggccgaggagga 43863
>ref|XM_526039.1| PREDICTED: Pan troglodytes similar to striated muscle preferentially expressed protein (LOC470657), mRNA Length = 10911 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 6397 gcccagaacctggcgggtgag 6417
>gb|AY954742.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.3 gene, complete cds; nuclear gene for chloroplast product Length = 1066 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 479 atccacggccgctgggccatgctcg 503 ||||||||||||||||| ||||||| Sbjct: 551 atccacggccgctgggcgatgctcg 575
>gb|AY954741.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.2 gene, complete cds; nuclear gene for chloroplast product Length = 1158 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 479 atccacggccgctgggccatgctcg 503 ||||||||||||||||| ||||||| Sbjct: 643 atccacggccgctgggcgatgctcg 667
>gb|AY954733.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.1 gene, complete cds; nuclear gene for chloroplast product Length = 1144 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 479 atccacggccgctgggccatgctcg 503 ||||||||||||||||| ||||||| Sbjct: 629 atccacggccgctgggcgatgctcg 653
>gb|AY954730.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.4 gene, partial cds; nuclear gene for chloroplast product Length = 636 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 479 atccacggccgctgggccatgctcg 503 ||||||||||||||||| ||||||| Sbjct: 121 atccacggccgctgggcgatgctcg 145
>gb|AY603755.1| Homo sapiens striated muscle preferentially expressed protein mRNA, partial cds Length = 9282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 4288 gcccagaacctggcgggtgag 4308
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 acctcgacggcacgctcgtcg 275 ||||||||||||||||||||| Sbjct: 1426896 acctcgacggcacgctcgtcg 1426916
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 gaaggccaaggcgcccccgac 210 ||||||||||||||||||||| Sbjct: 10560 gaaggccaaggcgcccccgac 10540 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 caagaagaaggccccgccgaagaaggcc 196 |||||||||||| ||| ||||||||||| Sbjct: 3381360 caagaagaaggctccggcgaagaaggcc 3381387
>gb|AE008829.1| Salmonella typhimurium LT2, section 133 of 220 of the complete genome Length = 20371 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 16976 ctggcgggtgagatcatcggc 16956
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cctcgacggcacgctcgtcggcgac 280 ||||||||||||||| ||||||||| Sbjct: 590998 cctcgacggcacgcttgtcggcgac 591022
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 137582 ctggcgggtgagatcatcggc 137562
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgct 501 ||||| ||||||| ||||||||||||||| Sbjct: 286 gagctgatccacgcccgctgggccatgct 314
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgct 501 ||||| ||||||| ||||||||||||||| Sbjct: 280 gagctgatccacgcccgctgggccatgct 308
>gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chromosome unknown, complete sequence Length = 217064 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 15804 gcccagaacctggcgggtgag 15824
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 ggccgccgcggcgagcacgttcctc 106 ||||||||||||| ||||||||||| Sbjct: 15345302 ggccgccgcggcgcgcacgttcctc 15345326
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 473 gagctcatccacggccgctgggccatgct 501 ||||| ||||||| ||||||||||||||| Sbjct: 268 gagctgatccacgcccgctgggccatgct 296
>gb|AC053503.7| Homo sapiens BAC clone RP11-316O14 from 2, complete sequence Length = 183625 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 135195 gcccagaacctggcgggtgag 135215
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 2802114 ctggcgggtgagatcatcggc 2802094
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgggcgcatcgtggcgcggtt 159 ||||||||||||||||||||| Sbjct: 5324906 cgggcgcatcgtggcgcggtt 5324886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 cgcgcaggcgcccgagtacctcgac 262 |||||||||||||||| |||||||| Sbjct: 4490470 cgcgcaggcgcccgagcacctcgac 4490494
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 254 tacctcgacggcacgctcgtcggcgactacggcttcgaccc 294 |||||||| |||||||| ||||||||| ||||||||||| Sbjct: 352 tacctcgatggcacgctgcccggcgactatggcttcgaccc 392
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 2825439 ctggcgggtgagatcatcggc 2825419
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster, complete sequence Length = 59816 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cgccgcggcgagcacgttcctcggg 109 |||||||||||||| |||||||||| Sbjct: 49515 cgccgcggcgagcatgttcctcggg 49539
>emb|Y13918.1|PABY13918 Pseudomonas aeruginosa phage phi CTX DNA, complete genome Length = 35559 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gcttcggcaagaagaaggccc 182 ||||||||||||||||||||| Sbjct: 28419 gcttcggcaagaagaaggccc 28439
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 cgcgcaggcgcccgagtacctcgac 262 ||||||||||||| ||||||||||| Sbjct: 1798284 cgcgcaggcgccccagtacctcgac 1798260
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 aggccccgccgaagaaggcca 197 ||||||||||||||||||||| Sbjct: 2058063 aggccccgccgaagaaggcca 2058083
>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07, complete sequence Length = 157622 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 ggccgccgcggcgagcacgttcctc 106 ||||||||||||| ||||||||||| Sbjct: 34186 ggccgccgcggcgcgcacgttcctc 34210
>gb|L27117.1|TRBH1C9AAA Trypanosoma cruzi histone H1 (H1.C9) mRNA, complete cds Length = 307 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggcc 196 |||||||||| |||||||||||||| Sbjct: 59 gaagaaggcctcgccgaagaaggcc 83 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 45 aagaaggcctcgccgaagaaggcc 68
>gb|L27120.1|TRBH1C6AAA Trypanosoma cruzi histone H1 (H1.C6) mRNA, 3' end Length = 502 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggcc 196 |||||||||| |||||||||||||| Sbjct: 38 gaagaaggcctcgccgaagaaggcc 62 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 24 aagaaggcctcgccgaagaaggcc 47
>dbj|AB037718.1| Homo sapiens mRNA for KIAA1297 protein, partial cds Length = 6726 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 1732 gcccagaacctggcgggtgag 1752
>dbj|AB008550.1| Pseudomonas aeruginosa phage phi CTX, complete genome sequence Length = 35580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gcttcggcaagaagaaggccc 182 ||||||||||||||||||||| Sbjct: 28419 gcttcggcaagaagaaggccc 28439
>ref|XM_550078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2497 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gctgtggttccccggcgcgc 242 |||||||||||||||||||| Sbjct: 159 gctgtggttccccggcgcgc 140
>ref|XM_493818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1737 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1678 gtcggcggccgccgcggcgagcac 1701
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccccgccgaagaaggccaag 199 |||||||||||||||||||| Sbjct: 1966435 ccccgccgaagaaggccaag 1966454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1687675 gtcggcggccgccgcggcgagcac 1687698
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cggtggccgccgcggcgagc 97 |||||||||||||||||||| Sbjct: 3373 cggtggccgccgcggcgagc 3392
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cggtggccgccgcggcgagc 97 |||||||||||||||||||| Sbjct: 34173 cggtggccgccgcggcgagc 34192
>ref|XM_388129.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07953.1) partial mRNA Length = 2367 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ttgcccagaacctggcgggt 376 |||||||||||||||||||| Sbjct: 29 ttgcccagaacctggcgggt 10
>ref|XM_801854.1| Trypanosoma cruzi strain CL Brener histone h1 (Tc00.1047053510225.10) partial mRNA Length = 435 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggc 195 |||||||||| ||||||||||||| Sbjct: 225 gaagaaggccgcgccgaagaaggc 248 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 211 aagaaggcctcgccgaagaaggcc 234
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 tggcgcggttcggcttcggcaaga 173 ||||||| |||||||||||||||| Sbjct: 976065 tggcgcgattcggcttcggcaaga 976042
>emb|AJ436918.1|PSP436918 Poseidonemertes sp. 508 mitochondrial partial COI gene for cytochrome c oxidase subunit 1 Length = 658 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 agtccaccccgttccagccc 433 |||||||||||||||||||| Sbjct: 334 agtccaccccgttccagccc 315
>gb|BC041922.1| Homo sapiens fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific), mRNA (cDNA clone IMAGE:5300179) Length = 1835 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 841 ggcggacccggcgccgcggaacgg 864
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccccggcgcgcaggcgcccg 251 |||||||||||||||||||| Sbjct: 878907 ccccggcgcgcaggcgcccg 878888
>gb|AY046273.1| Trypanosoma cruzi histone H1 gene, partial cds Length = 249 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggc 195 |||||||||| ||||||||||||| Sbjct: 39 gaagaaggccgcgccgaagaaggc 62 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 25 aagaaggcctcgccgaagaaggcc 48
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1687673 gtcggcggccgccgcggcgagcac 1687696
>gb|AF305082.1|AF305082 Homo sapiens alpha(1,3)-fucosyltransferase IV gene, promoter sequence, 5'UTR, and partial CDS Length = 3094 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 2525 ggcggacccggcgccgcggaacgg 2502
>dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C04, full insert sequence Length = 1949 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1806 gtcggcggccgccgcggcgagcac 1829
>dbj|AK103044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117F21, full insert sequence Length = 3638 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gctgtggttccccggcgcgc 242 |||||||||||||||||||| Sbjct: 580 gctgtggttccccggcgcgc 561
>dbj|AK063999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F06, full insert sequence Length = 2497 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gctgtggttccccggcgcgc 242 |||||||||||||||||||| Sbjct: 159 gctgtggttccccggcgcgc 140
>dbj|AP000943.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867G2, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 47205 ggcggacccggcgccgcggaacgg 47182
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccccggcgcgcaggcgcccg 251 |||||||||||||||||||| Sbjct: 910277 ccccggcgcgcaggcgcccg 910258
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tggccgccgcggcgagcacg 100 |||||||||||||||||||| Sbjct: 2557863 tggccgccgcggcgagcacg 2557844
>dbj|AB041774.1| Homo sapiens gene, 5' flanking region Length = 1098 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 580 ggcggacccggcgccgcggaacgg 557
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 100138 gtcggcggccgccgcggcgagcac 100161 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,839,458 Number of Sequences: 3902068 Number of extensions: 2839458 Number of successful extensions: 62121 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60124 Number of HSP's gapped (non-prelim): 1993 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)