ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet100c02 |
|---|---|
| Clone Library Name | barley_pub |
>DS_DROME (Q24292) Protein dachsous precursor (Adherin)| Length = 3503 Score = 35.4 bits (80), Expect = 0.084 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Frame = -2 Query: 387 SPSQGRHSERQLHSSNG*YLLLPPRSAP-TAAPPGL----APRVLQRPPRPPTHRGMALA 223 S ++ +HS + G +L PP SAP T PP L APR + P R P H +A A Sbjct: 3370 SSAKSKHSSSHSSAGAGSVVLKPPPSAPPTHIPPPLLTNVAPRAINLPMRLPPHLSLAPA 3429 Query: 222 QM 217 + Sbjct: 3430 HL 3431
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 35.0 bits (79), Expect = 0.11 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = -2 Query: 321 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 187 PP S P A PP P PP P LA ++ CGS+AS P Sbjct: 434 PPTSGPAAPPPPPPPPPPPPPPPLPPPPLPPLASLSHCGSQASPP 478
>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)| Length = 1426 Score = 32.0 bits (71), Expect = 0.93 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -2 Query: 321 PPRSAPTA--APPGLAPRVLQRPPRPPTHRGMALAQMA 214 P R PT+ +PP PRVL P P G++++Q+A Sbjct: 471 PSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLA 508
>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 609 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -2 Query: 321 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 187 P AP +APP P+ + PP P +RG +++ G GS + P Sbjct: 127 PAAPAPASAPPPSKPQNISAPPPPSMNRG--ASKLFGGGSVVNTP 169
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Frame = -3 Query: 350 TAVMGNICYYHQDLHRR--------PLRPGSRPGFCSGRRALLLIGAWRSPRWPGVG 204 TA + ++ Y+H H P RPG PG C R L+ GA SP PG G Sbjct: 511 TASVHHLVYHHHHHHHHHYHFSHGSPRRPGPEPGACDTR--LVRAGAPPSPPSPGRG 565
>PP2BB_HUMAN (P16298) Serine/threonine-protein phosphatase 2B catalytic subunit| beta isoform (EC 3.1.3.16) (Calmodulin-dependent calcineurin A subunit beta isoform) (CAM-PRP catalytic subunit) Length = 524 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -2 Query: 321 PPRSAPTAAPPGLAPRVLQRPPRPPTHR 238 PP P PPG A RV++ P PPTHR Sbjct: 11 PPPPPPPPPPPG-ADRVVKAVPFPPTHR 37
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 31.2 bits (69), Expect = 1.6 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 5/97 (5%) Frame = -2 Query: 444 PARLPLLAMVASLA*LK---YLSPSQGRHSE-RQLHSSNG*YLLLP-PRSAPTAAPPGLA 280 P P LAM S A + YL + HS + + Y+ LP P +P +P + Sbjct: 1083 PPHHPYLAMQVSPAIYRSTPYLPLTLSTHSRYASTQNLSDTYVQLPGPGYSPLYSPSMAS 1142 Query: 279 PRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFGAS 169 PP PP ALA A G+ +S+ S+F S Sbjct: 1143 LCSSYEPPPPPPLHPAALAAAAAAGAGSSSSSMFARS 1179
>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) Length = 1118 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -2 Query: 396 KYLSPSQGRHSERQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRP 250 K+L P G R HS + PP AP++APP P +P P Sbjct: 657 KFLDPITGTF--RYYHSPTNTVHMYPPEMAPSSAPPSTPPTHKAKPQIP 703
>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)| Length = 1161 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +2 Query: 227 SAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSS 328 S MP+ GG GG GA GA G GGSS Sbjct: 5 SRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSS 38
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 30.8 bits (68), Expect = 2.1 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 324 LPPRSAPTAAPPGLAPRVLQRPPRPPTH 241 LPPR+A PP P RP RPP+H Sbjct: 573 LPPRAATPTRPPSRPP---SRPSRPPSH 597
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = +2 Query: 83 GCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWASAMPR*VGGRGG 262 G W TAGR SA +T LP P+ R P + +++ +G Sbjct: 436 GLWGHGTAGRERCSQDSASPASSTGLPEGSEPE-SSCCPRTPEDGVDSASPSAQIGAERK 494 Query: 263 RCKTRGASPGGAAVGADLGG 322 + G PG GA LGG Sbjct: 495 AGGSLGEDPGLCIDGAGLGG 514
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 30.4 bits (67), Expect = 2.7 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 324 LPPRSAPTAAPPGLAPRVLQRPPRPPTH 241 LPPR+A PP P RP RPP+H Sbjct: 543 LPPRAATHTRPPSRPP---SRPSRPPSH 567
>UBP8_MOUSE (Q80U87) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific-processing protease 8) (Deubiquitinating enzyme 8) (mUBPy) Length = 1080 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -2 Query: 396 KYLSPSQGRHSERQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRP 250 K+L P G R HS + PP AP++APP P +P P Sbjct: 619 KFLDPITGTF--RYYHSPTNTVHMYPPEMAPSSAPPSTPPTHKVKPQVP 665
>TOM40_HUMAN (O96008) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (Haymaker protein) (p38.5) Length = 361 Score = 30.4 bits (67), Expect = 2.7 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 Query: 327 LLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 211 +L S P PP AP ++ PP PP+ G L + G Sbjct: 4 VLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGG 42
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 321 PPRSAPTAAPPGLAPRVLQRPPRPP 247 PP + T APP P+ L PP PP Sbjct: 511 PPAAPSTPAPPPAVPKELPAPPAPP 535
>EPL1_NEUCR (Q7S747) Enhancer of polycomb-like protein 1| Length = 589 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -2 Query: 396 KYLSPSQGRHSERQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRP-PRPP 247 K LSP QG + + YL+ PP SA + + P L +P P PP Sbjct: 380 KPLSPVQGPRQDLGFRPAKTQYLMTPPASASSGSMDEPTPMDLDKPKPNPP 430
>PGMI_AERPE (Q9YE01) Bifunctional phosphoglucose/phosphomannose isomerase| (Glucose-6-phosphate isomerase) (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Mannose-6-phosphate isomerase) (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) Length = 335 Score = 30.4 bits (67), Expect = 2.7 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 11/46 (23%) Frame = -2 Query: 297 APPGLAPRVLQ--RPPRPPTHR--GMALAQMAG-------CGSRAS 193 AP G RV++ RPPRPP HR G+ LA +G CGS S Sbjct: 57 APQGPEFRVVKDFRPPRPPRHRGYGLVLASYSGNTLETVECGSLLS 102
>LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis factor-alpha| factor homolog (LPS-induced TNF-alpha factor homolog) Length = 148 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -2 Query: 345 SNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMA 214 ++G Y +P +APP PP PP H+GM M+ Sbjct: 3 TSGNYQPVPIGFTVPSAPPSYEEATFHHPPYPPLHQGMDAKNMS 46
>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/55 (32%), Positives = 22/55 (40%) Frame = +2 Query: 32 PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 196 P AGL R P K W T R W+ + K+C T AP+ G E Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Frame = -2 Query: 330 LLLPPRSAPTAA-------PPGLAPRVLQRPPRPPTHRG 235 L LPP +P A PPG AP + PP P RG Sbjct: 293 LTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRG 331
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 330 LLLPPRSAPTAAPPGLAPRVLQRPPRPP 247 LLLPP S+P PP AP+ PP P Sbjct: 1033 LLLPPASSPPPPPPPPAPQRRATPPLAP 1060
>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 568 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 312 SAPTAAPPGLAPRVLQRPPRPP 247 S+P PP L PRVL P +PP Sbjct: 123 SSPCPLPPSLVPRVLGEPSQPP 144
>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)| Length = 374 Score = 30.0 bits (66), Expect = 3.5 Identities = 21/63 (33%), Positives = 29/63 (46%) Frame = -2 Query: 378 QGRHSERQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSR 199 Q H ER++ ++ G PP P PPG P PP PP G+ + ++G G Sbjct: 143 QPEHMERRVSNAGG--PPAPPAGGPPP-PPGPPP-----PPGPPPPPGLPSSGVSGAGHG 194 Query: 198 ASA 190 A A Sbjct: 195 AGA 197
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 30.0 bits (66), Expect = 3.5 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Frame = -2 Query: 321 PPRSAPTAAPPGLAP-RVLQRPPRPPTHR-----GMALAQMAGCGSRASAPSIFG 175 PP APTAAPP P R P PP +R AL A G PS+ G Sbjct: 313 PPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLG 367
>CP007_MOUSE (Q8C190) Protein C16orf7 homolog (5-day ovary-specific transcript 1| protein) Length = 649 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Frame = -2 Query: 360 RQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRPPT----HRGMALAQMAGCGSRAS 193 R+L SS Y +L P + P APRVL PP P+ H G + G + S Sbjct: 332 RRLRSSQSLYCMLSP------SEPSAAPRVLDGPPPTPSVPTLHSGPLDREADGSPAGPS 385 Query: 192 APSI 181 +P + Sbjct: 386 SPLV 389
>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)| Length = 685 Score = 29.6 bits (65), Expect = 4.6 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = -2 Query: 321 PPRSAPTAAPPGLAP---RVLQRPP--RPPTHRGMALAQMAGCGSRASAP 187 PPR P PPG P RPP RPP HRG G G A+AP Sbjct: 163 PPRRLPPPPPPGEQPPSGSGHSRPPGARPP-HRG---GSSRGSGDAAAAP 208
>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) (p144) (Formin-binding protein 28) (FBP 28) Length = 1100 Score = 29.6 bits (65), Expect = 4.6 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 324 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRG 235 +PP P PP + P LQRPP P G Sbjct: 76 MPPMPPPGGIPPPMGPPHLQRPPFMPPPMG 105
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 324 LPPRSAPTAAPPG-LAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPS 184 +PP SAP +PPG +AP+ PT +A GS +S+PS Sbjct: 249 IPPSSAPMTSPPGSMAPKSSSPVSNSPT----VSPSLAPGGSTSSSPS 292
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Frame = -2 Query: 318 PRSAPTAAPPGLAPRVLQ-----RPPRPPTHRGMALAQMAGCGSR 199 P P A PP LAPR LQ PP P H A QM+ G+R Sbjct: 811 PLMPPPAKPPMLAPRKLQPSAQFAPPPSPIHH-HAGVQMSAPGNR 854
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 9/45 (20%) Frame = -2 Query: 318 PRSAPTAAPPGLAPRVLQR---------PPRPPTHRGMALAQMAG 211 P + PT PP P LQ+ PP PP ALA +AG Sbjct: 212 PPAGPTGLPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAG 256
>PP2BB_RAT (P20651) Serine/threonine-protein phosphatase 2B catalytic subunit| beta isoform (EC 3.1.3.16) (Calmodulin-dependent calcineurin A subunit beta isoform) (CAM-PRP catalytic subunit) Length = 525 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%) Frame = -2 Query: 321 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 238 P R+AP PP P RV++ P PPTHR Sbjct: 6 PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37
>PP2BB_MOUSE (P48453) Serine/threonine-protein phosphatase 2B catalytic subunit| beta isoform (EC 3.1.3.16) (Calmodulin-dependent calcineurin A subunit beta isoform) (CAM-PRP catalytic subunit) Length = 525 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%) Frame = -2 Query: 321 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 238 P R+AP PP P RV++ P PPTHR Sbjct: 6 PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37
>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)| Length = 339 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -2 Query: 321 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIF 178 P S+ + A PG L P TH G A A A + A+A S F Sbjct: 23 PASSSSSVAAPGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASTF 70
>OAR1_LYMST (O77408) Octopamine receptor 1 (OA1)| Length = 638 Score = 29.3 bits (64), Expect = 6.0 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 353 CTAVMGNICYYHQDLHRRPLRPGSRPGFCSGRRALLLI-GAW 231 CTA + N+C D + RP PG S +RA L+ G W Sbjct: 112 CTASILNLCCISLDRYLAITRPIRYPGLMSAKRAKTLVAGVW 153
>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (38 kDa mitochondrial outer membrane protein) (OM38) Length = 361 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 327 LLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 211 +L S P PP P ++ PP PP+ G L + G Sbjct: 4 VLAASSPPAGPPPPPTPSLVGLPPPPPSPPGFTLPPLGG 42
>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) Length = 1511 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/66 (31%), Positives = 32/66 (48%) Frame = -2 Query: 366 SERQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 187 +E++L L P+ P P L P++LQ PP PP L +A G+ A+A Sbjct: 18 AEKKLEERRKRRRFLSPQQPPLLLPL-LQPQLLQPPPPPP-----PLLFLAAPGAAAAAA 71 Query: 186 SIFGAS 169 ++ AS Sbjct: 72 AVAAAS 77
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = -2 Query: 357 QLHSSNG*YLLLPP----RSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASA 190 Q + G Y LLP RS PT+A P+ Q PP P A A G AS+ Sbjct: 10 QFRTREGFYKLLPGDATRRSGPTSAQTPAPPQPTQPPPGP------AAASGPGAAGPASS 63 Query: 189 P 187 P Sbjct: 64 P 64
>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) Length = 1098 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 324 LPPRSAPTAAPPGLAPRVLQRPPRPP 247 +PP P PP + P LQRPP P Sbjct: 76 MPPMPPPGGIPPPMGPPHLQRPPFMP 101
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/75 (29%), Positives = 29/75 (38%) Frame = -2 Query: 465 AVSSTARPARLPLLAMVASLA*LKYLSPSQGRHSERQLHSSNG*YLLLPPRSAPTAAPPG 286 A S A PA P + + A LK PS Q + +L P + P + PP Sbjct: 698 APDSQASPAPAP---QIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPS 754 Query: 285 LAPRVLQRPPRPPTH 241 V + P PP H Sbjct: 755 RPQSVSRPPSEPPLH 769
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +2 Query: 50 CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 154 C PRTHK C S + SWK+ KEC T Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483
>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88| kDa nuclear pore complex protein) (Nucleoporin Nup84) Length = 742 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 115 VMEVEIR*GVCNNSPAESTSPENGWR*SARPTPGHLGERH 234 V+ + +R G+ N SPAE+ P S P P HL R+ Sbjct: 22 VVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRN 61
>SN1L2_HUMAN (Q9H0K1) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 926 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/47 (38%), Positives = 21/47 (44%) Frame = -2 Query: 387 SPSQGRHSERQLHSSNG*YLLLPPRSAPTAAPPGLAPRVLQRPPRPP 247 SP ++ E QL LP S P AAPP Q+PP PP Sbjct: 788 SPFLSQYQEMQLQP-------LPSTSGPRAAPPLPTQLQQQQPPPPP 827
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 321 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGM 232 PP P+A P P RPP PP+ GM Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 380
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 28.9 bits (63), Expect = 7.8 Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Frame = -2 Query: 321 PPRSAPTAAP-PGLAPRVLQRPPRP------PTHRGMALAQMAGCGSRASAPSIFGAS*F 163 P R P P P PR P +P P RG A G SAP GA Sbjct: 200 PARGDPVGEPGPAARPRTPAPPAQPAAVAAAPARRGPASPASPAAGP-VSAPGGGGAPSG 258 Query: 162 GR*VVTHSLADFDFHDHRPAVLIDQHPLWVLG*RAVGHRNPASGSSRIASSA 7 G H H HR +L + L R +G R+P S + +SS+ Sbjct: 259 GGDRGRHH------HQHREPLLDEPAAARRLDPRPLGARSPVSSNPNSSSSS 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,102,387 Number of Sequences: 219361 Number of extensions: 1452636 Number of successful extensions: 6388 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 5089 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6295 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
