ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet100a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K0220_HUMAN (Q92617) Protein KIAA0220 (Fragment) 31 1.6
2CX56_CHICK (P29415) Gap junction Cx56 protein (Connexin-56) 30 3.6
3ENTC_ECOLI (P0AEJ2) Isochorismate synthase entC (EC 5.4.4.2) (Is... 29 6.2
4ENTC_ECO57 (P0AEJ3) Isochorismate synthase entC (EC 5.4.4.2) (Is... 29 6.2
5VP61_NPVAC (Q03209) 61 kDa protein 29 6.2
6ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: ... 28 8.1

>K0220_HUMAN (Q92617) Protein KIAA0220 (Fragment)|
          Length = 884

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
 Frame = -2

Query: 432 CLATPLPP--DDQ---PSMALLPTMPP--LPENPTAT*DLLSGADSTKLHWLVP 292
           CL TPLPP  DD    P   LL  +PP  LP  P +  D L       LH L P
Sbjct: 156 CLLTPLPPSADDNLKTPPECLLTPLPPSALPSAPPSADDNLKTRAECLLHPLPP 209



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>CX56_CHICK (P29415) Gap junction Cx56 protein (Connexin-56)|
          Length = 510

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
 Frame = -2

Query: 435 YCLATPL--PPDDQPSMALLPTMPPLPEN----PTAT*DLLSGADSTKLHWLVPVFL-YL 277
           Y  A P   PP +  SMA  P  PP+PEN     T T         T +    P  + Y 
Sbjct: 319 YAAAAPRTRPPSNTASMASYPVAPPVPENRHRAVTPTPVSTPVTIPTPIPTPTPAIINYF 378

Query: 276 RMKSSSFQRVMQW--KASESKGTRRATGRSPSHESDFWW-LPAKQKP 145
             KS++      W   A+E +G   ++    S  S     LP +++P
Sbjct: 379 NSKSNALAAEQNWVNMAAEQQGKAPSSSAGSSTPSSVRHPLPEQEEP 425



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>ENTC_ECOLI (P0AEJ2) Isochorismate synthase entC (EC 5.4.4.2) (Isochorismate|
           mutase)
          Length = 391

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/71 (26%), Positives = 27/71 (38%)
 Frame = +2

Query: 203 VARLVPFDSDAFHCITLWKDEDFILRYKNTGTSQWSFVLSAPDKRSYVAVGFSGKGGMVG 382
           +A L PFD + F  I  W D +        G  +W   +     R      F+G G +  
Sbjct: 316 IAELEPFDRELFGGIVGWCDSE--------GNGEWVVTIRCAKLRENQVRLFAGAGIVPA 367

Query: 383 SSAMLGWSSGG 415
           SS +  W   G
Sbjct: 368 SSPLGEWRETG 378



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>ENTC_ECO57 (P0AEJ3) Isochorismate synthase entC (EC 5.4.4.2) (Isochorismate|
           mutase)
          Length = 391

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/71 (26%), Positives = 27/71 (38%)
 Frame = +2

Query: 203 VARLVPFDSDAFHCITLWKDEDFILRYKNTGTSQWSFVLSAPDKRSYVAVGFSGKGGMVG 382
           +A L PFD + F  I  W D +        G  +W   +     R      F+G G +  
Sbjct: 316 IAELEPFDRELFGGIVGWCDSE--------GNGEWVVTIRCAKLRENQVRLFAGAGIVPA 367

Query: 383 SSAMLGWSSGG 415
           SS +  W   G
Sbjct: 368 SSPLGEWRETG 378



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>VP61_NPVAC (Q03209) 61 kDa protein|
          Length = 543

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 414 PPDDQPSMALLPTMPPLPENP 352
           PP   PSM+ LP  PP+P  P
Sbjct: 198 PPPPPPSMSELPPAPPMPTEP 218



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>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 421

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 423 TPLPPDDQPSMALLPTMPPLPENPTAT*DLLSGADSTK 310
           +P PP   P+  L P  PP P  P++T  L  G    K
Sbjct: 349 SPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAK 386


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,411,490
Number of Sequences: 219361
Number of extensions: 620043
Number of successful extensions: 2893
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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