ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet09d08 |
|---|---|
| Clone Library Name | barley_pub |
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 187 bits (475), Expect = 1e-47 Identities = 96/131 (73%), Positives = 97/131 (74%) Frame = +3 Query: 51 MASAMELSLLNPAMHHYGIAAKTASHLPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 230 MASAMELSLLNPAMHHYGIAAKTASHLPVVP Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPVVPARRASSGAVRFRVRAAAAAPPAPAAKPGS 60 Query: 231 XXXXXKTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFI 410 KTEVNESLLTPRFYTTDFDEMEQLFNAEIN+QLNQDEFDALLQEFKTDYNQTHFI Sbjct: 61 PKKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI 120 Query: 411 RNPEFKEAADK 443 RNPEFKEAADK Sbjct: 121 RNPEFKEAADK 131
>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 119 bits (299), Expect = 3e-27 Identities = 55/66 (83%), Positives = 61/66 (92%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K E+NE+LLTPRFYTTDFDEME LFN EIN++LNQ EF+ALLQEFKTDYNQTHF+RN EF Sbjct: 54 KKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFKTDYNQTHFVRNKEF 113 Query: 426 KEAADK 443 KEAADK Sbjct: 114 KEAADK 119
>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Copper response defect 1 protein) (Dicarboxylate diiron protein) (AtZIP Length = 409 Score = 117 bits (292), Expect = 2e-26 Identities = 54/66 (81%), Positives = 60/66 (90%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K E+ ESLLTPRFYTTDF+EMEQLFN EIN+ LN+ EF+ALLQEFKTDYNQTHF+RN EF Sbjct: 58 KKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVRNKEF 117 Query: 426 KEAADK 443 KEAADK Sbjct: 118 KEAADK 123
>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 115 bits (289), Expect = 4e-26 Identities = 53/66 (80%), Positives = 59/66 (89%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 KT + E+LLTPRFYTTDFDEME LFN EIN+ LNQ EF++LLQEFKTDYNQTHF+RN EF Sbjct: 54 KTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFKTDYNQTHFVRNKEF 113 Query: 426 KEAADK 443 KEAADK Sbjct: 114 KEAADK 119
>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) (Copper target homolog 1 protein) Length = 407 Score = 96.3 bits (238), Expect = 3e-20 Identities = 42/66 (63%), Positives = 55/66 (83%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K +E+LLTPRFYTTDFDEME+LF+ E+N+ ++ +EF+A+L EFK DYNQ HF+RN F Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDYNQRHFVRNETF 115 Query: 426 KEAADK 443 KEAA+K Sbjct: 116 KEAAEK 121
>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein Length = 407 Score = 92.4 bits (228), Expect = 4e-19 Identities = 42/66 (63%), Positives = 50/66 (75%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K E+LLTPRFYTTDFDEMEQLF+ EIN L+ +E +A L EF+ DYN+ HF+RN F Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFRNDYNKVHFVRNETF 115 Query: 426 KEAADK 443 K AADK Sbjct: 116 KAAADK 121
>ACSF_GRATL (Q6B8U1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 75.9 bits (185), Expect = 4e-14 Identities = 37/63 (58%), Positives = 48/63 (76%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 +T V E+LLTPRFYTTDFDEM +L + N DEF+ALLQEF+ DYN+ HFIR+ EF Sbjct: 9 QTPVKETLLTPRFYTTDFDEMSKL-----DISSNIDEFEALLQEFRADYNRQHFIRDQEF 63 Query: 426 KEA 434 +++ Sbjct: 64 EQS 66
>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3) Length = 358 Score = 72.4 bits (176), Expect = 5e-13 Identities = 34/65 (52%), Positives = 48/65 (73%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K E+LLTPRFYTTDFDEM A ++ +N+DE A+L+EF+TDYN+ HF+R+ EF Sbjct: 18 KVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFRTDYNRHHFVRDAEF 72 Query: 426 KEAAD 440 +++ D Sbjct: 73 EKSWD 77
>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 358 Score = 70.9 bits (172), Expect = 1e-12 Identities = 33/65 (50%), Positives = 46/65 (70%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 KT E++LTPRFYTTDFDEM A+++ N+DE A+L+EF+ DYN+ HF+RN F Sbjct: 18 KTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFRVDYNRHHFVRNESF 72 Query: 426 KEAAD 440 ++ D Sbjct: 73 NKSWD 77
>ACSF_PROMP (Q7V1M1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 390 Score = 69.7 bits (169), Expect = 3e-12 Identities = 31/66 (46%), Positives = 47/66 (71%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K +++LTP FYTTDF+ ME++ + +N+DE +A+ +EF+ DYN+ HF+RN EF Sbjct: 18 KDIAKDTILTPNFYTTDFEAMEKM-----DLSINEDELEAICEEFRKDYNRHHFVRNKEF 72 Query: 426 KEAADK 443 + AADK Sbjct: 73 EGAADK 78
>ACSF_SYNPX (Q7U6Y8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 356 Score = 68.6 bits (166), Expect = 7e-12 Identities = 32/66 (48%), Positives = 47/66 (71%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K V +++LTPRFYTTDFD+M A ++ + N+ E +A+ +EF+ DYN+ HF+RN +F Sbjct: 16 KDPVKDTILTPRFYTTDFDDM-----AAMDLRPNEAELEAICEEFRKDYNRHHFVRNDDF 70 Query: 426 KEAADK 443 AADK Sbjct: 71 DGAADK 76
>ACSF_SYNP6 (Q5MZZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 67.0 bits (162), Expect = 2e-11 Identities = 31/64 (48%), Positives = 44/64 (68%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K E++LTPRFYTTDF+ M A+++ N+DE A+L+EF+ DYN+ HF+R PEF Sbjct: 18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVRTPEF 72 Query: 426 KEAA 437 +A Sbjct: 73 DGSA 76
>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 65.9 bits (159), Expect = 4e-11 Identities = 31/58 (53%), Positives = 41/58 (70%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEA 434 E+LLTPRFYTTDF+EM A +N N+ +F A+L+EF+ DYN HFIR EF ++ Sbjct: 14 ETLLTPRFYTTDFEEM-----ASMNISENEQDFFAILEEFRADYNSQHFIRGEEFNQS 66
>ACSF2_SYNY3 (P74134) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 65.1 bits (157), Expect = 7e-11 Identities = 31/65 (47%), Positives = 42/65 (64%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K V E+LLTPRFYTTDFD++ L L +E +A L+E + DYN+ HF+RN +F Sbjct: 18 KAPVKETLLTPRFYTTDFDKVANLVLT-----LQDEEIEAALEELRADYNRYHFVRNDDF 72 Query: 426 KEAAD 440 K + D Sbjct: 73 KRSFD 77
>ACSF1_SYNEL (Q8DJ05) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 380 Score = 64.7 bits (156), Expect = 1e-10 Identities = 31/65 (47%), Positives = 46/65 (70%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K E++LTPRFYTTDF+ M N +I E N+ E +A+L+EF+ DYN+ HF+R+ EF Sbjct: 18 KAPAKETILTPRFYTTDFEAMA---NMDITE--NKAELEAILEEFRCDYNRHHFVRDEEF 72 Query: 426 KEAAD 440 +++ D Sbjct: 73 EQSWD 77
>ACSF_CYAME (Q85FX6) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 335 Score = 64.3 bits (155), Expect = 1e-10 Identities = 30/57 (52%), Positives = 42/57 (73%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEFKE 431 ++LLTPRFYTTDFD+M A+ + N+ E +A++ EF+ DYNQTHFIR+ EF + Sbjct: 12 QTLLTPRFYTTDFDQM-----AKYDISKNRAEIEAIVNEFRKDYNQTHFIRDDEFDQ 63
>ACSF2_ANASP (Q8YVU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 64.3 bits (155), Expect = 1e-10 Identities = 30/65 (46%), Positives = 44/65 (67%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K V E+LLTPRFYTTDFD + A ++ N+ E A+++E + DYN+ HF+R+ EF Sbjct: 18 KAPVQETLLTPRFYTTDFDAV-----ANLDISANETEIRAIVEELRADYNRHHFVRDEEF 72 Query: 426 KEAAD 440 K++ D Sbjct: 73 KQSWD 77
>ACSF_CYACA (Q9TLR8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 354 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/60 (46%), Positives = 41/60 (68%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 K + E+LL PRFYTTDFDE+ + + N +E +A++ EF++DYN+ HFIR+ EF Sbjct: 11 KKTIKETLLAPRFYTTDFDEISRY-----DISSNFEEIEAIVNEFRSDYNKKHFIRDEEF 65
>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 354 Score = 57.8 bits (138), Expect = 1e-08 Identities = 27/62 (43%), Positives = 43/62 (69%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEA 434 + E+LLTPRFYTTDF++ +L +++ Q Q++ +A+L E + DYN+ HF+R+ FK Sbjct: 17 IRENLLTPRFYTTDFEQAAKL---DLSRQ--QEQLEAMLAEMRADYNRHHFVRDDSFKGT 71 Query: 435 AD 440 D Sbjct: 72 WD 73
>ACSF_GLOVI (Q7NFA1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 346 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/64 (45%), Positives = 43/64 (67%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 ++E E+LLTPRFYTTDF+ + A+++ + +F+ALL EF+ DYN+ HF R+ F Sbjct: 13 QSERRETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQADYNREHFQRDAGF 67 Query: 426 KEAA 437 E A Sbjct: 68 VEQA 71
>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 351 Score = 55.1 bits (131), Expect = 8e-08 Identities = 28/63 (44%), Positives = 41/63 (65%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 KT E++LTPRFYTTDF E N +++ Q N E A+L E + DYN+ HF+R+ F Sbjct: 11 KTPSKETVLTPRFYTTDF---ETAANLDLSAQEN--ELQAMLAEMRADYNRHHFVRDEAF 65 Query: 426 KEA 434 +++ Sbjct: 66 EQS 68
>ACSF_RHOPA (Q6N9J7) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 365 Score = 48.5 bits (114), Expect = 7e-06 Identities = 22/55 (40%), Positives = 37/55 (67%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF 425 +++LTPRFYTTD+ M++L + L + E+ A++ E + DYN++HF + EF Sbjct: 31 DTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHFKKTDEF 80
>ACSF_RHOGE (Q8VPB5) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = +3 Query: 264 SLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEF-KEAAD 440 +LL+PRFYTTD+ M + + I E+DA+L E++ D N HF R PEF +E A+ Sbjct: 21 TLLSPRFYTTDYAAMNAIDVSSIRA-----EWDAMLAEYEGDNNHDHFQRTPEFAQEVAE 75 Query: 441 K 443 + Sbjct: 76 R 76
>ACSF_PROMM (Q7V3Y9) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/62 (33%), Positives = 39/62 (62%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEA 434 ++++LLTPRFYTT+FD+ A+ + + + +F+A+ +E + DYN HF R + Sbjct: 23 LDDNLLTPRFYTTEFDKA-----AKTDLDIARKDFEAMFKEMEADYNLKHFDRKASLERL 77 Query: 435 AD 440 ++ Sbjct: 78 SE 79
>ACSF_PROMA (Q7VBV0) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 347 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/53 (39%), Positives = 37/53 (69%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 ++E+LLTPRFYTT+F++ A+ + ++ + +F+A+ +E + DYN HF R Sbjct: 21 LDENLLTPRFYTTEFEKA-----AKTDLEIARKDFEAMFKEMEADYNLKHFDR 68
>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein| homolog) Length = 741 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 182 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 57 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAAVAAAASGGKSGGG 44
>SUZ12_HUMAN (Q15022) Polycomb protein SUZ12 (Suppressor of zeste 12 protein| homolog) (Joined to JAZF1 protein) (Chromatin precipitated E2F target 9 protein) (ChET 9 protein) Length = 739 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 182 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 57 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAVAAATASGGKSGGG 44
>FGD4_HUMAN (Q96M96) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filament-binding protein frabin) (FGD1-related F-actin-binding protein) (Zinc finger FYVE domain-containing protein 6) Length = 766 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +3 Query: 258 NESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDA 365 NE LLT R Y D ++Q+F ++ E+ N+ F A Sbjct: 212 NELLLTERAYVNRLDLLDQVFYCKLLEEANRGSFPA 247
>UB2Q1_MOUSE (Q7TSS2) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) Length = 422 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 179 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 75 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPSRGSVPGDPVRIHCNITE 110
>UB2Q1_HUMAN (Q7Z7E8) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) (Protein NICE-5) Length = 422 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 179 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 75 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPPRGSVPGDPVRIHCNITE 110
>PRC_HAEIN (P45306) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (C-terminal-processing peptidase) Length = 695 Score = 29.3 bits (64), Expect = 4.5 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 282 FYTTDFDEMEQLFNAEINEQLNQDEFDA 365 F +D DE+ Q + +++EQLNQ + A Sbjct: 92 FLQSDIDELRQKYGTKLDEQLNQGDLSA 119
>FGD4_MOUSE (Q91ZT5) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filement-binding protein frabin) (FGD1-related F-actin-binding protein) Length = 766 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDA 365 E LLT R Y + D ++Q+F ++ E+ N+ F A Sbjct: 213 ELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPA 247 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,895,265 Number of Sequences: 219361 Number of extensions: 609138 Number of successful extensions: 2688 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2666 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
