ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet09c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196021.1| Oryza sativa (japonica cultivar-group) putative mannitol transporter protein (OSJNBb0076H04.3), mRNA Length = 1521 Score = 436 bits (220), Expect = e-119 Identities = 331/368 (89%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggctac 152 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 34 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggctat 93 Query: 153 gacagcggcgtgatgagcggcgccatgctgttcatcaaggaggacctcaagaccaacgac 212 |||| || |||||||| || || ||||||||||||||||||||||| ||||| |||||| Sbjct: 94 gacactggtgtgatgagtggggcgatgctgttcatcaaggaggacctgaagacgaacgac 153 Query: 213 acgcagctgcaggtgctcgcgggcatcctcaacgtgtgcgcgctcgtggggtcgctcacc 272 |||||| ||||||| ||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 154 acgcaggtgcaggtcctcgccgggatcctcaacgtgtgcgcgctcgtcggctccctcacc 213 Query: 273 gccggccgcgtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgcatc 332 |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 214 gccggccgcgtctccgactgcgtcggccgccgcctcaccatctccctcgccgcctgcatc 273 Query: 333 ttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggc 392 ||||||| || |||| |||||||||||||||||||||||||||||||||| | | |||| Sbjct: 274 ttcctcgtgggctccgtcctcatgggcctcgcgcccaacttcgccacgctcctcgccggc 333 Query: 393 cgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtc 452 |||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| | Sbjct: 334 cgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgtacgccgcc 393 Query: 453 gagatcgc 460 |||||||| Sbjct: 394 gagatcgc 401
>dbj|AK121279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108G21, full insert sequence Length = 1998 Score = 436 bits (220), Expect = e-119 Identities = 331/368 (89%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggctac 152 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 230 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggctat 289 Query: 153 gacagcggcgtgatgagcggcgccatgctgttcatcaaggaggacctcaagaccaacgac 212 |||| || |||||||| || || ||||||||||||||||||||||| ||||| |||||| Sbjct: 290 gacactggtgtgatgagtggggcgatgctgttcatcaaggaggacctgaagacgaacgac 349 Query: 213 acgcagctgcaggtgctcgcgggcatcctcaacgtgtgcgcgctcgtggggtcgctcacc 272 |||||| ||||||| ||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 350 acgcaggtgcaggtcctcgccgggatcctcaacgtgtgcgcgctcgtcggctccctcacc 409 Query: 273 gccggccgcgtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgcatc 332 |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 410 gccggccgcgtctccgactgcgtcggccgccgcctcaccatctccctcgccgcctgcatc 469 Query: 333 ttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggc 392 ||||||| || |||| |||||||||||||||||||||||||||||||||| | | |||| Sbjct: 470 ttcctcgtgggctccgtcctcatgggcctcgcgcccaacttcgccacgctcctcgccggc 529 Query: 393 cgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtc 452 |||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| | Sbjct: 530 cgctgcgtcgccggcgtcggcgtcggctacgcgctcatgattgcgccggtgtacgccgcc 589 Query: 453 gagatcgc 460 |||||||| Sbjct: 590 gagatcgc 597
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 371 bits (187), Expect = 1e-99 Identities = 271/299 (90%) Strand = Plus / Plus Query: 162 gtgatgagcggcgccatgctgttcatcaaggaggacctcaagaccaacgacacgcagctg 221 |||||||| || || ||||||||||||||||||||||| ||||| |||||||||||| || Sbjct: 141396 gtgatgagtggggcgatgctgttcatcaaggaggacctgaagacgaacgacacgcaggtg 141455 Query: 222 caggtgctcgcgggcatcctcaacgtgtgcgcgctcgtggggtcgctcaccgccggccgc 281 ||||| ||||| || ||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 141456 caggtcctcgccgggatcctcaacgtgtgcgcgctcgtcggctccctcaccgccggccgc 141515 Query: 282 gtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgcatcttcctcgcc 341 ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 141516 gtctccgactgcgtcggccgccgcctcaccatctccctcgccgcctgcatcttcctcgtg 141575 Query: 342 gggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtc 401 || |||| |||||||||||||||||||||||||||||||||| | | ||||||||||||| Sbjct: 141576 ggctccgtcctcatgggcctcgcgcccaacttcgccacgctcctcgccggccgctgcgtc 141635 Query: 402 gccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagatcgc 460 ||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||| Sbjct: 141636 gccggcgtcggcgtcggctacgcgctcatgattgcgccggtgtacgccgccgagatcgc 141694 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggcta 151 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 141095 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggcta 141153
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 371 bits (187), Expect = 1e-99 Identities = 271/299 (90%) Strand = Plus / Plus Query: 162 gtgatgagcggcgccatgctgttcatcaaggaggacctcaagaccaacgacacgcagctg 221 |||||||| || || ||||||||||||||||||||||| ||||| |||||||||||| || Sbjct: 19506 gtgatgagtggggcgatgctgttcatcaaggaggacctgaagacgaacgacacgcaggtg 19565 Query: 222 caggtgctcgcgggcatcctcaacgtgtgcgcgctcgtggggtcgctcaccgccggccgc 281 ||||| ||||| || ||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 19566 caggtcctcgccgggatcctcaacgtgtgcgcgctcgtcggctccctcaccgccggccgc 19625 Query: 282 gtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgcatcttcctcgcc 341 ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 19626 gtctccgactgcgtcggccgccgcctcaccatctccctcgccgcctgcatcttcctcgtg 19685 Query: 342 gggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtc 401 || |||| |||||||||||||||||||||||||||||||||| | | ||||||||||||| Sbjct: 19686 ggctccgtcctcatgggcctcgcgcccaacttcgccacgctcctcgccggccgctgcgtc 19745 Query: 402 gccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagatcgc 460 ||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||| Sbjct: 19746 gccggcgtcggcgtcggctacgcgctcatgattgcgccggtgtacgccgccgagatcgc 19804 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggcta 151 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 19205 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggcta 19263
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 371 bits (187), Expect = 1e-99 Identities = 271/299 (90%) Strand = Plus / Minus Query: 162 gtgatgagcggcgccatgctgttcatcaaggaggacctcaagaccaacgacacgcagctg 221 |||||||| || || ||||||||||||||||||||||| ||||| |||||||||||| || Sbjct: 10539455 gtgatgagtggggcgatgctgttcatcaaggaggacctgaagacgaacgacacgcaggtg 10539396 Query: 222 caggtgctcgcgggcatcctcaacgtgtgcgcgctcgtggggtcgctcaccgccggccgc 281 ||||| ||||| || ||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 10539395 caggtcctcgccgggatcctcaacgtgtgcgcgctcgtcggctccctcaccgccggccgc 10539336 Query: 282 gtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgcatcttcctcgcc 341 ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 10539335 gtctccgactgcgtcggccgccgcctcaccatctccctcgccgcctgcatcttcctcgtg 10539276 Query: 342 gggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtc 401 || |||| |||||||||||||||||||||||||||||||||| | | ||||||||||||| Sbjct: 10539275 ggctccgtcctcatgggcctcgcgcccaacttcgccacgctcctcgccggccgctgcgtc 10539216 Query: 402 gccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagatcgc 460 ||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||| Sbjct: 10539215 gccggcgtcggcgtcggctacgcgctcatgattgcgccggtgtacgccgccgagatcgc 10539157 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggcta 151 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 10539756 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggcta 10539698
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 371 bits (187), Expect = 1e-99 Identities = 271/299 (90%) Strand = Plus / Minus Query: 162 gtgatgagcggcgccatgctgttcatcaaggaggacctcaagaccaacgacacgcagctg 221 |||||||| || || ||||||||||||||||||||||| ||||| |||||||||||| || Sbjct: 10545494 gtgatgagtggggcgatgctgttcatcaaggaggacctgaagacgaacgacacgcaggtg 10545435 Query: 222 caggtgctcgcgggcatcctcaacgtgtgcgcgctcgtggggtcgctcaccgccggccgc 281 ||||| ||||| || ||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 10545434 caggtcctcgccgggatcctcaacgtgtgcgcgctcgtcggctccctcaccgccggccgc 10545375 Query: 282 gtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgcatcttcctcgcc 341 ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 10545374 gtctccgactgcgtcggccgccgcctcaccatctccctcgccgcctgcatcttcctcgtg 10545315 Query: 342 gggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtc 401 || |||| |||||||||||||||||||||||||||||||||| | | ||||||||||||| Sbjct: 10545314 ggctccgtcctcatgggcctcgcgcccaacttcgccacgctcctcgccggccgctgcgtc 10545255 Query: 402 gccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagatcgc 460 ||||||||||||||||||||||| |||||||| ||||| || ||||||| ||||||||| Sbjct: 10545254 gccggcgtcggcgtcggctacgcgctcatgattgcgccggtgtacgccgccgagatcgc 10545196 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggcta 151 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 10545795 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggcta 10545737
>ref|NM_189409.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 271 ccgccggccgcgtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgca 330 |||||||||| |||||||||| |||| ||||||||||||||| ||||||||| || Sbjct: 170 ccgccggccggacctccgactggatcggccgccgcctcaccatcatcctcgccgcggtca 229 Query: 331 tcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcg 390 ||||| ||| ||| || | | ||||||||| | ||||| | ||| |||| ||| || Sbjct: 230 tcttcttcgtcggcgccatcatgatgggcctctccgtcaactaccccatgctcatggccg 289 Query: 391 gccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccg 450 |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 290 gccgcttcgtcgccggcatcggcgtcggctacgccttcatgatcgcgcccgtctacaccg 349 Query: 451 tcgag 455 |||| Sbjct: 350 ccgag 354
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 271 ccgccggccgcgtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgca 330 |||||||||| |||||||||| |||| ||||||||||||||| ||||||||| || Sbjct: 42630190 ccgccggccggacctccgactggatcggccgccgcctcaccatcatcctcgccgcggtca 42630131 Query: 331 tcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcg 390 ||||| ||| ||| || | | ||||||||| | ||||| | ||| |||| ||| || Sbjct: 42630130 tcttcttcgtcggcgccatcatgatgggcctctccgtcaactaccccatgctcatggccg 42630071 Query: 391 gccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccg 450 |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 42630070 gccgcttcgtcgccggcatcggcgtcggctacgccttcatgatcgcgcccgtctacaccg 42630011 Query: 451 tcgag 455 |||| Sbjct: 42630010 ccgag 42630006 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||| | |||||||||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 11671923 ctcgccacctgcatcttcctcgcgggctccgtcctcatgggcctcgcccccaacttcgcc 11671864 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggc 413 || ||| | | ||||||||| | || |||||||||| Sbjct: 11671863 acactcctcgccggccgctgtggcgtcggcgtcggc 11671828 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggc 419 |||||||||||||||||||||| Sbjct: 28978713 cgtcgccggcgtcggcgtcggc 28978734 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccc 426 ||||| ||||||||||||||||| ||||| Sbjct: 2081947 cgtcgtcggcgtcggcgtcggctccgccc 2081975 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcg 417 |||||||||||||||||||| Sbjct: 42115042 cgtcgccggcgtcggcgtcg 42115023 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ctcaccatctcgctcgccgc 325 |||||||||||||||||||| Sbjct: 20371132 ctcaccatctcgctcgccgc 20371151
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 271 ccgccggccgcgtctccgactgggtcgggcgccgcctcaccatctcgctcgccgcgtgca 330 |||||||||| |||||||||| |||| ||||||||||||||| ||||||||| || Sbjct: 151073 ccgccggccggacctccgactggatcggccgccgcctcaccatcatcctcgccgcggtca 151014 Query: 331 tcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcg 390 ||||| ||| ||| || | | ||||||||| | ||||| | ||| |||| ||| || Sbjct: 151013 tcttcttcgtcggcgccatcatgatgggcctctccgtcaactaccccatgctcatggccg 150954 Query: 391 gccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccg 450 |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 150953 gccgcttcgtcgccggcatcggcgtcggctacgccttcatgatcgcgcccgtctacaccg 150894 Query: 451 tcgag 455 |||| Sbjct: 150893 ccgag 150889
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 109 bits (55), Expect = 8e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||||| |||||||||||||| || |||| ||||| ||||||| | |||||||||||| Sbjct: 4221167 ctcgccgcctgcatcttcctcgcgggctccgtcctcacgggcctcacccccaacttcgcc 4221226 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggcgtcggct 420 || ||| | | ||||||||||||||| |||||||||||||||| Sbjct: 4221227 acactccttgccggccgctgcgtcgctggcgtcggcgtcggct 4221269 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagat 457 |||||||||| ||||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 19938907 cgtcgccggcatcggcgtcggctatgccctcgtcatcgcccccgtctacgccgccgagat 19938848 Query: 458 c 458 | Sbjct: 19938847 c 19938847 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cgccggcgtcggcgtcggct 420 |||||||||||||||||||| Sbjct: 16629164 cgccggcgtcggcgtcggct 16629145
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 109 bits (55), Expect = 8e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||||| |||||||||||||| || |||| ||||| ||||||| | |||||||||||| Sbjct: 4221154 ctcgccgcctgcatcttcctcgcgggctccgtcctcacgggcctcacccccaacttcgcc 4221213 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggcgtcggct 420 || ||| | | ||||||||||||||| |||||||||||||||| Sbjct: 4221214 acactccttgccggccgctgcgtcgctggcgtcggcgtcggct 4221256 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagat 457 |||||||||| ||||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 19865121 cgtcgccggcatcggcgtcggctatgccctcgtcatcgcccccgtctacgccgccgagat 19865062 Query: 458 c 458 | Sbjct: 19865061 c 19865061 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cgccggcgtcggcgtcggct 420 |||||||||||||||||||| Sbjct: 16582397 cgccggcgtcggcgtcggct 16582378
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 109 bits (55), Expect = 8e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||||| |||||||||||||| || |||| ||||| ||||||| | |||||||||||| Sbjct: 62616 ctcgccgcctgcatcttcctcgcgggctccgtcctcacgggcctcacccccaacttcgcc 62557 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggcgtcggct 420 || ||| | | ||||||||||||||| |||||||||||||||| Sbjct: 62556 acactccttgccggccgctgcgtcgctggcgtcggcgtcggct 62514
>gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full insert mRNA sequence Length = 2109 Score = 93.7 bits (47), Expect = 5e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 115 ccatcatcggctccatcatctccatcctcatgggctacgacagcggcgtgatgagcggcg 174 ||||| ||| |||||| | |||||||||| | |||||||||| ||||||||||||||| | Sbjct: 172 ccatcctcgcctccatgacctccatcctcctcggctacgacatcggcgtgatgagcggag 231 Query: 175 ccatgctgttcatcaaggaggacctcaagaccaacgacacgcagctgcaggtgctcgcgg 234 | ||||| |||| || |||| || |||| ||||||||| |||||| |||| ||| || Sbjct: 232 cgtcgctgtacatccagaaggatctgaagatcaacgacacccagctggaggtcctcatgg 291 Query: 235 gcatcctcaacgtgt 249 ||||||||||||||| Sbjct: 292 gcatcctcaacgtgt 306 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| || ||||| || Sbjct: 425 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtggggtacgctct 484 Query: 428 catgatcgcgcccgt 442 ||||||||||||||| Sbjct: 485 catgatcgcgcccgt 499
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||| | |||||||||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 111047 ctcgccacctgcatcttcctcgcgggctccgtcctcatgggcctcgcccccaacttcgcc 110988 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggc 413 || ||| | | ||||||||| | || |||||||||| Sbjct: 110987 acactcctcgccggccgctgtggcgtcggcgtcggc 110952
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||| | |||||||||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 11091 ctcgccacctgcatcttcctcgcgggctccgtcctcatgggcctcgcccccaacttcgcc 11032 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggc 413 || ||| | | ||||||||| | || |||||||||| Sbjct: 11031 acactcctcgccggccgctgtggcgtcggcgtcggc 10996
>dbj|AK062341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F02, full insert sequence Length = 687 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 318 ctcgccgcgtgcatcttcctcgccgggtccgccctcatgggcctcgcgcccaacttcgcc 377 |||||| | |||||||||||||| || |||| ||||||||||||||| |||||||||||| Sbjct: 4 ctcgccacctgcatcttcctcgcgggctccgtcctcatgggcctcgcccccaacttcgcc 63 Query: 378 acgctcttggtcggccgctgcgtcgccggcgtcggc 413 || ||| | | ||||||||| | || |||||||||| Sbjct: 64 acactcctcgccggccgctgtggcgtcggcgtcggc 99
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 5067160 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 5067219 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 5067220 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 5067265 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 334 tcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggcc 393 ||||||| || |||| ||||||||||||| | ||||||||||| | ||| | | ||||| Sbjct: 8106064 tcctcgcgggctccgtcctcatgggcctcacccccaacttcgctgcactcctcgccggcc 8106123 Query: 394 gctgcgtcgccggcgtcggcgtcggct 420 ||||||||||||||||| ||||||||| Sbjct: 8106124 gctgcgtcgccggcgtcagcgtcggct 8106150 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 388 tcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcc 439 ||||||||| ||| |||||||| || || |||||||| |||||||||||||| Sbjct: 5080929 tcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgcc 5080980 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggctac 152 |||||||||||| | || ||| ||||| ||| |||||| | |||||||||| | |||||| Sbjct: 5080538 aacaagtacgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctac 5080597 Query: 153 g 153 | Sbjct: 5080598 g 5080598
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 131614 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 131673 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 131674 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 131719
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 102547 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 102488 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 102487 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 102442 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 388 tcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcc 439 ||||||||| ||| |||||||| || || |||||||| |||||||||||||| Sbjct: 88778 tcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgcc 88727 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggctac 152 |||||||||||| | || ||| ||||| ||| |||||| | |||||||||| | |||||| Sbjct: 89169 aacaagtacgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctac 89110 Query: 153 g 153 | Sbjct: 89109 g 89109
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 5066375 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 5066434 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 5066435 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 5066480 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 334 tcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggcc 393 ||||||| || |||| ||||||||||||| | ||||||||||| | ||| | | ||||| Sbjct: 8103899 tcctcgcgggctccgtcctcatgggcctcacccccaacttcgctgcactcctcgccggcc 8103958 Query: 394 gctgcgtcgccggcgtcggcgtcggct 420 ||||||||||||||||| ||||||||| Sbjct: 8103959 gctgcgtcgccggcgtcagcgtcggct 8103985 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 388 tcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcc 439 ||||||||| ||| |||||||| || || |||||||| |||||||||||||| Sbjct: 5080144 tcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgcc 5080195 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggctac 152 |||||||||||| | || ||| ||||| ||| |||||| | |||||||||| | |||||| Sbjct: 5079753 aacaagtacgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctac 5079812 Query: 153 g 153 | Sbjct: 5079813 g 5079813
>dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A02, full insert sequence Length = 2167 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 537 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 596 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 597 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 642
>dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J16, full insert sequence Length = 2252 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 538 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 597 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 598 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 643
>dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F11, full insert sequence Length = 2300 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 350 cctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgt 409 ||||||||||||||| || |||| ||| ||| ||| |||||||| ||| |||||| | Sbjct: 538 cctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgtggccggcat 597 Query: 410 cggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||| ||||||||||||||||| ||| ||| |||| Sbjct: 598 cggcgtcggctacgcgctcatgatcgcgcccgtgtacaccgccgag 643
>gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full insert mRNA sequence Length = 1872 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 351 ctcatgggcctcgcgcccaacttcgccacgctcttggtcggccgctgcgtcgccggcgtc 410 ||||||||| ||||| ||||| ||||| |||| |||||||||||| |||| ||||| || Sbjct: 434 ctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgtcaccggcatc 493 Query: 411 ggcgtcggctacgccctcatgatcgcgcc 439 ||||| ||||||||| ||||| ||||||| Sbjct: 494 ggcgtgggctacgccatcatggtcgcgcc 522
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 334 tcctcgccgggtccgccctcatgggcctcgcgcccaacttcgccacgctcttggtcggcc 393 ||||||| || |||| ||||||||||||| | ||||||||||| | ||| | | ||||| Sbjct: 37494 tcctcgcgggctccgtcctcatgggcctcacccccaacttcgctgcactcctcgccggcc 37553 Query: 394 gctgcgtcgccggcgtcggcgtcggct 420 ||||||||||||||||| ||||||||| Sbjct: 37554 gctgcgtcgccggcgtcagcgtcggct 37580
>dbj|AK106326.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F02, full insert sequence Length = 1968 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggcta 151 |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| Sbjct: 1720 aacaagtacgccgtcgggtgctccatcatcggctccatcatctcggtcctcatgggcta 1778
>dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J11, full insert sequence Length = 1857 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagat 457 |||||||||| ||||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 419 cgtcgccggcatcggcgtcggctatgccctcgtcatcgcccccgtctacgccgccgagat 478 Query: 458 c 458 | Sbjct: 479 c 479
>dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B07, full insert sequence Length = 1729 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagat 457 |||||||||| ||||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 413 cgtcgccggcatcggcgtcggctatgccctcgtcatcgcccccgtctacgccgccgagat 472 Query: 458 c 458 | Sbjct: 473 c 473
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgagat 457 |||||||||| ||||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 88353 cgtcgccggcatcggcgtcggctatgccctcgtcatcgcccccgtctacgccgccgagat 88412 Query: 458 c 458 | Sbjct: 88413 c 88413
>ref|XM_478892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1961 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 403 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 462 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 463 catgatcgcgcc 474 Score = 48.1 bits (24), Expect = 0.026 Identities = 72/88 (81%) Strand = Plus / Plus Query: 115 ccatcatcggctccatcatctccatcctcatgggctacgacagcggcgtgatgagcggcg 174 ||||| ||| |||||| | |||||||||| | |||||||| | ||| ||||||||||| | Sbjct: 150 ccatcctcgcctccatgacctccatcctcctcggctacgatatcggggtgatgagcgggg 209 Query: 175 ccatgctgttcatcaaggaggacctcaa 202 | ||||| ||||||| ||||| |||| Sbjct: 210 cgtcgctgtacatcaagaaggacttcaa 237
>ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1301_C12.3 mRNA Length = 1962 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 404 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 463 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 464 catgatcgcgcc 475 Score = 48.1 bits (24), Expect = 0.026 Identities = 72/88 (81%) Strand = Plus / Plus Query: 115 ccatcatcggctccatcatctccatcctcatgggctacgacagcggcgtgatgagcggcg 174 ||||| ||| |||||| | |||||||||| | |||||||| | ||| ||||||||||| | Sbjct: 151 ccatcctcgcctccatgacctccatcctcctcggctacgatatcggggtgatgagcgggg 210 Query: 175 ccatgctgttcatcaaggaggacctcaa 202 | ||||| ||||||| ||||| |||| Sbjct: 211 cgtcgctgtacatcaagaaggacttcaa 238
>gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter mRNA, complete cds Length = 1860 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 530 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 589 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 590 catgatcgcgcc 601 Score = 48.1 bits (24), Expect = 0.026 Identities = 72/88 (81%) Strand = Plus / Plus Query: 115 ccatcatcggctccatcatctccatcctcatgggctacgacagcggcgtgatgagcggcg 174 ||||| ||| |||||| | |||||||||| | |||||||| | ||| ||||||||||| | Sbjct: 277 ccatcctcgcctccatgacctccatcctcctcggctacgatatcggggtgatgagcgggg 336 Query: 175 ccatgctgttcatcaaggaggacctcaa 202 | ||||| ||||||| ||||| |||| Sbjct: 337 cgtcgctgtacatcaagaaggacttcaa 364
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 23529193 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 23529252 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 23529253 catgatcgcgcc 23529264 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 374 cgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgat 433 |||||| ||| |||||||||||| ||| || ||||||||||| || ||||| ||||||| Sbjct: 23532418 cgccactctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgat 23532359 Query: 434 cgcgcccgtctacgccgtcgagatcgcgtcggcg 467 ||||||||| ||| | | ||||||| || ||||| Sbjct: 23532358 cgcgcccgtgtacacggccgagatctcgccggcg 23532325 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcgccggcgtcggcgtcggct 420 ||||||||||||||||||||| Sbjct: 2256565 tcgccggcgtcggcgtcggct 2256545 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gtcgccggcgtcggcgtcgg 418 |||||||||||||||||||| Sbjct: 20847437 gtcgccggcgtcggcgtcgg 20847456
>dbj|AB125647.1| Malus x domestica MdSOT4 mRNA for sorbitol transporter, complete cds Length = 2173 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 389 cggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgc 448 |||||||| |||||||||| ||||||||||||||||||||| || || ||||||||||| Sbjct: 504 cggccgcttcgtcgccggcctcggcgtcggctacgccctcacaattgctcccgtctacgc 563
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 89586 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 89645 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 89646 catgatcgcgcc 89657 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 374 cgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgat 433 |||||| ||| |||||||||||| ||| || ||||||||||| || ||||| ||||||| Sbjct: 92811 cgccactctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgat 92752 Query: 434 cgcgcccgtctacgccgtcgagatcgcgtcggcg 467 ||||||||| ||| | | ||||||| || ||||| Sbjct: 92751 cgcgcccgtgtacacggccgagatctcgccggcg 92718
>dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102G08, full insert sequence Length = 1961 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 403 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 462 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 463 catgatcgcgcc 474 Score = 48.1 bits (24), Expect = 0.026 Identities = 72/88 (81%) Strand = Plus / Plus Query: 115 ccatcatcggctccatcatctccatcctcatgggctacgacagcggcgtgatgagcggcg 174 ||||| ||| |||||| | |||||||||| | |||||||| | ||| ||||||||||| | Sbjct: 150 ccatcctcgcctccatgacctccatcctcctcggctacgatatcggggtgatgagcgggg 209 Query: 175 ccatgctgttcatcaaggaggacctcaa 202 | ||||| ||||||| ||||| |||| Sbjct: 210 cgtcgctgtacatcaagaaggacttcaa 237
>dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E03, full insert sequence Length = 1962 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 368 caacttcgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccct 427 ||||| ||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| || Sbjct: 404 caactacgccatgctcatgttcggccgcttcgtggccggcatcggcgtgggctacgcgct 463 Query: 428 catgatcgcgcc 439 |||||||||||| Sbjct: 464 catgatcgcgcc 475 Score = 48.1 bits (24), Expect = 0.026 Identities = 72/88 (81%) Strand = Plus / Plus Query: 115 ccatcatcggctccatcatctccatcctcatgggctacgacagcggcgtgatgagcggcg 174 ||||| ||| |||||| | |||||||||| | |||||||| | ||| ||||||||||| | Sbjct: 151 ccatcctcgcctccatgacctccatcctcctcggctacgatatcggggtgatgagcgggg 210 Query: 175 ccatgctgttcatcaaggaggacctcaa 202 | ||||| ||||||| ||||| |||| Sbjct: 211 cgtcgctgtacatcaagaaggacttcaa 238
>ref|XM_478893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 374 cgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgat 433 |||||| ||| |||||||||||| ||| || ||||||||||| || ||||| ||||||| Sbjct: 336 cgccactctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgat 395 Query: 434 cgcgcccgtctacgccgtcgagatcgcgtcggcg 467 ||||||||| ||| | | ||||||| || ||||| Sbjct: 396 cgcgcccgtgtacacggccgagatctcgccggcg 429
>dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-F04, full insert sequence Length = 1620 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 374 cgccacgctcttggtcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgat 433 |||||| ||| |||||||||||| ||| || ||||||||||| || ||||| ||||||| Sbjct: 324 cgccactctcatggtcggccgcttcgtggcgggcgtcggcgtggggtacgcgatcatgat 383 Query: 434 cgcgcccgtctacgccgtcgagatcgcgtcggcg 467 ||||||||| ||| | | ||||||| || ||||| Sbjct: 384 cgcgcccgtgtacacggccgagatctcgccggcg 417
>gb|AY592976.1| Malus x domestica sorbitol transporter (SOT1) mRNA, complete cds Length = 2010 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 389 cggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctac 446 |||||||| ||||||||| |||| |||||||||||||||| ||| || ||||||||| Sbjct: 364 cggccgctttgtcgccggcatcggagtcggctacgccctcacgattgctcccgtctac 421
>gb|AF482011.1| Prunus cerasus sorbitol transporter mRNA, complete cds Length = 1927 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 409 tcggcgtcggctacgccctcatgatcgcgcccgtctac 446 |||||||||||||||||||||||||||| || |||||| Sbjct: 441 tcggcgtcggctacgccctcatgatcgctccggtctac 478
>gb|AY237400.1| Malus x domestica sorbitol transporter (SOT1) mRNA, complete cds Length = 2012 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 389 cggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctac 446 |||||||| ||||||||| |||| |||||||||||||||| ||| || ||||||||| Sbjct: 364 cggccgctttgtcgccggcatcggagtcggctacgccctcacgattgctcccgtctac 421
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 388 tcggccgctgcgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcc 439 ||||||||| ||| |||||||| || || |||||||| |||||||||||||| Sbjct: 175591 tcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgcc 175540 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 93 aacaagtacgccgtggcttgctccatcatcggctccatcatctccatcctcatgggctac 152 |||||||||||| | || ||| ||||| ||| |||||| | |||||||||| | |||||| Sbjct: 175982 aacaagtacgccctcgcctgcgccatcctcgcctccatgaactccatcctcctcggctac 175923 Query: 153 g 153 | Sbjct: 175922 g 175922
>gb|AY100638.1| Prunus cerasus putative sorbitol transporter (SorT2) mRNA, complete cds Length = 2032 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 414 gtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 ||||||||||||||||||||||| || |||||| ||| |||| Sbjct: 488 gtcggctacgccctcatgatcgctccggtctacaccgccgag 529
>dbj|AB125648.1| Malus x domestica MdSOT5 mRNA for sorbitol transporter, complete cds Length = 1980 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 409 tcggcgtcggctacgccctcatgat 433 ||||||||||||||||||||||||| Sbjct: 533 tcggcgtcggctacgccctcatgat 557
>dbj|AP006086.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT20G22, TM0150, complete sequence Length = 93469 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 gccggcgtcggcgtcggctacgccctcatgatcgcgcccgt 442 |||||| ||||| | |||||||||||||||||||| ||||| Sbjct: 50061 gccggcatcggcattggctacgccctcatgatcgcccccgt 50101
>dbj|AP004984.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44N06, TM0438, complete sequence Length = 107764 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 402 gccggcgtcggcgtcggctacgccctcatgatcgcgcccgt 442 |||||| ||||| | |||||||||||||||||||| ||||| Sbjct: 86401 gccggcatcggcattggctacgccctcatgatcgcccccgt 86441
>gb|AY136668.1| Orobanche ramosa putative mannitol transporter (MaT1) mRNA, complete cds Length = 1648 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 409 tcggcgtcggctacgccctcatgatcgcgcccgtctacgc 448 |||||||||||||||| || ||||||||||| || ||||| Sbjct: 446 tcggcgtcggctacgcgctgatgatcgcgccggtttacgc 485
>emb|AL353581.14| Human DNA sequence from clone RP11-65L19 on chromosome 13 Contains a heat shock 90kDa protein 1, beta (HSPCB) pseudogene, a novel gene and a tubby like protein 3 (TULP3) pseudogene, complete sequence Length = 148942 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2 cagagggtgaggaggagaagaaga 25 |||||||||||||||||||||||| Sbjct: 48493 cagagggtgaggaggagaagaaga 48470
>ref|NM_192201.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcggc 419 |||||||||||||||||||||| Sbjct: 418 cgtcgccggcgtcggcgtcggc 397
>emb|AL645615.14| Mouse DNA sequence from clone RP23-395B22 on chromosome 11 Contains the Ddx52 gene for DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, the Ap1gbp1 gene for AP1 gamma subunit binding protein 1, the Dusp14 gene for dual specificity phosphatase 14 and the Tada2l gene for transcriptional adaptor 2 (ADA2 homolog, yeast)-like, complete sequence Length = 196812 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 catcatctccatcctcatgggc 149 |||||||||||||||||||||| Sbjct: 151976 catcatctccatcctcatgggc 151997
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcggc 419 |||||||||||||||||||||| Sbjct: 69555 cgtcgccggcgtcggcgtcggc 69534
>dbj|AK135802.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420418L03 product:unclassifiable, full insert sequence Length = 1136 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 catcatctccatcctcatgggc 149 |||||||||||||||||||||| Sbjct: 1053 catcatctccatcctcatgggc 1032
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcggc 419 |||||||||||||||||||||| Sbjct: 29932803 cgtcgccggcgtcggcgtcggc 29932782 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 aggaggagaagaagaccacggtgg 34 |||||||||||||||| ||||||| Sbjct: 4662609 aggaggagaagaagacgacggtgg 4662586
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggc 419 |||||||||||||||||||||| Sbjct: 23071 cgtcgccggcgtcggcgtcggc 23092
>dbj|AP003254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0454A11 Length = 152240 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggc 419 |||||||||||||||||||||| Sbjct: 91336 cgtcgccggcgtcggcgtcggc 91357
>emb|AJ563367.1|GMA563367 Glycine max mRNA for sorbitol-like transporter (stp gene) Length = 1894 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccctcatgatcgcgcccgtctacgccgtcgag 455 |||||| ||| | ||| ||||||||||||||||||| || || |||||| ||| |||| Sbjct: 549 cgtcgctggcattggcatcggctacgccctcatgatagcccctgtctacaccgccgag 606
>emb|AM084331.1| Lotus corniculatus var. japonicus mRNA for putative polyol transporter protein 4 (plt4 gene), strain Gifu B-129 Length = 1905 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 400 tcgccggcgtcggcgtcggctacgccctcatgat 433 |||||||| | ||| ||||||||||||||||||| Sbjct: 541 tcgccggcattggcatcggctacgccctcatgat 574
>emb|AL772138.15| Mouse DNA sequence from clone RP23-213F17 on chromosome 4, complete sequence Length = 229213 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 agagggtgaggaggagaagaag 24 |||||||||||||||||||||| Sbjct: 25522 agagggtgaggaggagaagaag 25543
>ref|XM_462765.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcggctacgccc 426 ||||| ||||||||||||||||| ||||| Sbjct: 151 cgtcgtcggcgtcggcgtcggctccgccc 123
>ref|XM_518213.1| PREDICTED: Pan troglodytes similar to XAP-5-like protein (LOC462405), mRNA Length = 1376 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 1126 tgttcatcaaggaggacctca 1146
>ref|NM_186268.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 tcgccggcgtcggcgtcggct 420 ||||||||||||||||||||| Sbjct: 398 tcgccggcgtcggcgtcggct 418
>gb|BC001261.1| Homo sapiens family with sequence similarity 50, member B, mRNA (cDNA clone MGC:5026 IMAGE:3457886), complete cds Length = 1648 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 829 tgttcatcaaggaggacctca 849
>ref|NM_012135.1| Homo sapiens family with sequence similarity 50, member B (FAM50B), mRNA Length = 1618 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 819 tgttcatcaaggaggacctca 839
>gb|AC174830.3| Myotis lucifugus clone CH235-234J19, complete sequence Length = 196835 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 agggtgaggaggagaagaaga 25 ||||||||||||||||||||| Sbjct: 51785 agggtgaggaggagaagaaga 51805
>emb|AL451081.5| Human DNA sequence from clone RP11-302I18 on chromosome 1 Contains a thyroid autoantigen 70kDa (Ku antigen) (G22P1) pseudogene, a ribosomal protein, large, P0 (RPLP0) pseudogene and a novel gene, complete sequence Length = 76193 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 25216 tgttcatcaaggaggacctca 25196
>emb|AL391422.17| Human DNA sequence from clone RP11-420L9 on chromosome 6 Contains the 5' end of a novel gene, a novel pseudogene, the gene for XAP-5-like protein (X5L) (DNA segment on chromosome 6 (unique) 2654 expressed sequence) (D6S2654E) a novel gene and CpG islands, complete sequence Length = 138221 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 117519 tgttcatcaaggaggacctca 117539
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 ggctacgacagcggcgtgatg 167 ||||||||||||||||||||| Sbjct: 1720331 ggctacgacagcggcgtgatg 1720351 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcgccggcgtcggcgtcggc 419 |||||||||||||||||||| Sbjct: 3132925 tcgccggcgtcggcgtcggc 3132906
>gb|AC091851.2| Homo sapiens chromosome 5 clone CTD-2258D22, complete sequence Length = 155606 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ggaggaagagcagaggaacaa 67 ||||||||||||||||||||| Sbjct: 117485 ggaggaagagcagaggaacaa 117505
>emb|CR623120.1| full-length cDNA clone CS0DF015YD01 of Fetal brain of Homo sapiens (human) Length = 1559 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 785 tgttcatcaaggaggacctca 805
>emb|CR605415.1| full-length cDNA clone CS0DC024YG15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 762 tgttcatcaaggaggacctca 782
>emb|CR602326.1| full-length cDNA clone CS0DC008YB11 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 988 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 202 tgttcatcaaggaggacctca 222
>emb|CR600946.1| full-length cDNA clone CS0DC026YF01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1554 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 777 tgttcatcaaggaggacctca 797
>emb|CR597441.1| full-length cDNA clone CS0DF016YI10 of Fetal brain of Homo sapiens (human) Length = 1585 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 820 tgttcatcaaggaggacctca 840
>emb|CR590152.1| full-length cDNA clone CS0DM006YE22 of Fetal liver of Homo sapiens (human) Length = 1606 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 821 tgttcatcaaggaggacctca 841
>dbj|AB168613.1| Macaca fascicularis testis cDNA clone: QtsA-13479, similar to human DNA segment on chromosome 6(unique) 2654 expressedsequence (D6S2654E), mRNA, RefSeq: NM_012135.1 Length = 1593 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 784 tgttcatcaaggaggacctca 804
>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence Length = 152251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 tgggggaggaagagcagagga 63 ||||||||||||||||||||| Sbjct: 42240 tgggggaggaagagcagagga 42260
>gb|AC010880.8| Homo sapiens BAC clone RP11-282G6 from 2, complete sequence Length = 115431 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 catctccatcctcatgggcta 151 ||||||||||||||||||||| Sbjct: 13270 catctccatcctcatgggcta 13250
>gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of the complete genome Length = 19762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 gcgtcgccggcgtcggcgtcg 417 ||||||||||||||||||||| Sbjct: 11830 gcgtcgccggcgtcggcgtcg 11850
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccc 426 ||||| ||||||||||||||||| ||||| Sbjct: 144525 cgtcgtcggcgtcggcgtcggctccgccc 144553
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcggctacgccc 426 ||||| ||||||||||||||||| ||||| Sbjct: 3059 cgtcgtcggcgtcggcgtcggctccgccc 3087
>ref|NM_208441.1| Eremothecium gossypii ABR141Wp (ABR141W), mRNA Length = 1095 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 186 atcaaggaggacctcaagaccaacgacac 214 |||| ||||||||||||||||| |||||| Sbjct: 751 atcacggaggacctcaagaccaccgacac 779
>emb|Y18504.1|HOSA18504 Homo sapiens X5L gene Length = 2875 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 1859 tgttcatcaaggaggacctca 1879
>emb|Y18503.1|HOSA18503 Homo sapiens mRNA for X5L protein Length = 1618 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 tgttcatcaaggaggacctca 201 ||||||||||||||||||||| Sbjct: 819 tgttcatcaaggaggacctca 839
>gb|AF035395.2|AF035395 Pseudomonas aeruginosa serine/threonine protein kinase PpkA (ppkA) gene, complete cds Length = 3603 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 gcgtcgccggcgtcggcgtcg 417 ||||||||||||||||||||| Sbjct: 3258 gcgtcgccggcgtcggcgtcg 3238
>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_B12 Length = 121362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 tcgccggcgtcggcgtcggct 420 ||||||||||||||||||||| Sbjct: 30264 tcgccggcgtcggcgtcggct 30244
>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 agggtgaggaggagaagaaga 25 ||||||||||||||||||||| Sbjct: 30717 agggtgaggaggagaagaaga 30737
>gb|DQ317931.1| Mycobacterium phlei carbon monoxide dehydrogenase form I large subunit gene, partial cds Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 acgtgtgcgcgctcgtggggtcgct 268 ||||||||||| ||||||||||||| Sbjct: 38 acgtgtgcgcgatcgtggggtcgct 62
>gb|DQ317930.1| Mycobacterium vaccae carbon monoxide dehydrogenase form I large subunit gene, partial cds Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 acgtgtgcgcgctcgtggggtcgct 268 ||||||||||| ||||||||||||| Sbjct: 38 acgtgtgcgcgatcgtggggtcgct 62
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 186 atcaaggaggacctcaagaccaacgacac 214 |||| ||||||||||||||||| |||||| Sbjct: 664446 atcacggaggacctcaagaccaccgacac 664474
>ref|NM_122145.3| Arabidopsis thaliana Rac GTPase activator AT5G22400 mRNA, complete cds Length = 1865 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 ggaggagaagaagaccacggtggggaag 39 ||||||||||||||| | |||||||||| Sbjct: 359 ggaggagaagaagacgatggtggggaag 386
>ref|NM_128781.2| Arabidopsis thaliana structural constituent of ribosome AT2G32220 mRNA, complete cds Length = 605 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 cgagatcgcgtcggcggaga 471 |||||||||||||||||||| Sbjct: 329 cgagatcgcgtcggcggaga 310
>ref|XM_463762.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1692 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcg 417 |||||||||||||||||||| Sbjct: 959 cgtcgccggcgtcggcgtcg 978
>gb|AY190704.1| Pagrus major heat shock protein 90 beta mRNA, partial cds Length = 1784 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 cagagggtgaggaggagaagaaga 25 |||||| ||||||||||||||||| Sbjct: 759 cagaggatgaggaggagaagaaga 782
>ref|XM_364092.1| Magnaporthe grisea 70-15 hypothetical protein (MG08937.4) partial mRNA Length = 1617 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 144 atgggctacgacagcggcgtgatgagcggcgccatg 179 |||||||||||||||| |||||| ||||| ||||| Sbjct: 100 atgggctacgacagcgccgtgatcggcggcaccatg 135
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 gccgctgcgtcgccggcgtcggcg 414 ||||| |||||||||||||||||| Sbjct: 237172 gccgccgcgtcgccggcgtcggcg 237195
>ref|XM_329579.1| Neurospora crassa OR74A hypothetical protein (NCU08535.1) partial mRNA Length = 6828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 catcctcatgggctacgaca 156 |||||||||||||||||||| Sbjct: 2409 catcctcatgggctacgaca 2428
>ref|XM_957924.1| Neurospora crassa OR74A hypothetical protein (NCU08535.1) partial mRNA Length = 6828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 catcctcatgggctacgaca 156 |||||||||||||||||||| Sbjct: 2409 catcctcatgggctacgaca 2428
>gb|AF461150.2| Heterodera glycines Hsp90 mRNA, complete cds Length = 2247 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 cagagggtgaggaggagaagaaga 25 ||||| |||||||||||||||||| Sbjct: 1613 cagagagtgaggaggagaagaaga 1636
>emb|CR715178.2|CNS0GES6 Tetraodon nigroviridis full-length cDNA Length = 487 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 agggtgaggaggagaagaag 24 |||||||||||||||||||| Sbjct: 348 agggtgaggaggagaagaag 329
>gb|AC131026.11| Medicago truncatula clone mth2-6e18, complete sequence Length = 114815 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 tcggctacgccctcatgatcgcgcccgtctac 446 |||||||||| ||||||||||| || |||||| Sbjct: 80377 tcggctacgctctcatgatcgccccggtctac 80408
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 206 caacgacacgcagctgcaggtgctcgcg 233 ||||||||||||| ||||||||||||| Sbjct: 2433822 caacgacacgcagaagcaggtgctcgcg 2433849
>gb|AC162917.3| Mus musculus BAC clone RP23-379N7 from chromosome 9, complete sequence Length = 189606 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcatcggctccatcatctcc 137 |||||||||||||||||||| Sbjct: 127563 tcatcggctccatcatctcc 127582
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcgccggcgtcggcgtcggc 419 |||||||||||||||||||| Sbjct: 103740 tcgccggcgtcggcgtcggc 103721
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cgtcgccggcgtcggcgtcg 417 |||||||||||||||||||| Sbjct: 73290 cgtcgccggcgtcggcgtcg 73309
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 aggaggagaagaagaccacggtgg 34 |||||||||||||||| ||||||| Sbjct: 52742 aggaggagaagaagacgacggtgg 52719
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcg 417 |||||||||||||||||||| Sbjct: 1966836 cgtcgccggcgtcggcgtcg 1966817
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 cgagatcgcgtcggcggaga 471 |||||||||||||||||||| Sbjct: 10163 cgagatcgcgtcggcggaga 10182
>gb|AC079917.6| Homo sapiens chromosome 11, clone RP11-55I22, complete sequence Length = 140542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aagccatgggggaggaagag 56 |||||||||||||||||||| Sbjct: 114075 aagccatgggggaggaagag 114094
>ref|XM_679604.1| PREDICTED: Danio rerio similar to [Carassius auratus gene, complete cds.], gene product (LOC556731), mRNA Length = 1608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gagggtgaggaggagaagaa 23 |||||||||||||||||||| Sbjct: 721 gagggtgaggaggagaagaa 740
>emb|BX649630.9| Zebrafish DNA sequence from clone DKEY-125B7 in linkage group 21, complete sequence Length = 124133 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gagggtgaggaggagaagaa 23 |||||||||||||||||||| Sbjct: 119291 gagggtgaggaggagaagaa 119272
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tcgccggcgtcggcgtcggc 419 |||||||||||||||||||| Sbjct: 3158580 tcgccggcgtcggcgtcggc 3158561
>emb|BX832015.1|CNS0A147 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1674 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 ggaggagaagaagaccacggtggggaag 39 ||||||||||||||| | |||||||||| Sbjct: 354 ggaggagaagaagacgatggtggggaag 381
>emb|BX832004.1|CNS09YVN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1840 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 ggaggagaagaagaccacggtggggaag 39 ||||||||||||||| | |||||||||| Sbjct: 361 ggaggagaagaagacgatggtggggaag 388
>gb|BT021972.1| Arabidopsis thaliana At2g32220 mRNA, complete cds Length = 509 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 cgagatcgcgtcggcggaga 471 |||||||||||||||||||| Sbjct: 322 cgagatcgcgtcggcggaga 303
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cgtcgccggcgtcggcgtcg 417 |||||||||||||||||||| Sbjct: 101847 cgtcgccggcgtcggcgtcg 101828
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ctcaccatctcgctcgccgc 325 |||||||||||||||||||| Sbjct: 27247 ctcaccatctcgctcgccgc 27266
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ctcaccatctcgctcgccgc 325 |||||||||||||||||||| Sbjct: 137165 ctcaccatctcgctcgccgc 137184
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ttcctcgccgggtccgccct 352 |||||||||||||||||||| Sbjct: 4799827 ttcctcgccgggtccgccct 4799808
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gtcgccggcgtcggcgtcgg 418 |||||||||||||||||||| Sbjct: 58227 gtcgccggcgtcggcgtcgg 58246
>dbj|AB007651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD9 Length = 85421 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 ggaggagaagaagaccacggtggggaag 39 ||||||||||||||| | |||||||||| Sbjct: 64037 ggaggagaagaagacgatggtggggaag 64010
>dbj|AK107289.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B09, full insert sequence Length = 2225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cgccggcgtcggcgtcggct 420 |||||||||||||||||||| Sbjct: 679 cgccggcgtcggcgtcggct 660
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cgctcaccgccggccgcgtc 284 |||||||||||||||||||| Sbjct: 1090558 cgctcaccgccggccgcgtc 1090539
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 tctccgactgggtcgggcgccgcc 306 |||||||| ||||||||||||||| Sbjct: 2900996 tctccgaccgggtcgggcgccgcc 2900973
>emb|AL713948.4|CNS07YPR Oryza sativa chromosome 12, . BAC OJ1008_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129944 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cgccggcgtcggcgtcggct 420 |||||||||||||||||||| Sbjct: 41602 cgccggcgtcggcgtcggct 41621
>gb|AC135358.3| Mus musculus BAC clone RP24-107J13 from 9, complete sequence Length = 182075 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcatcggctccatcatctcc 137 |||||||||||||||||||| Sbjct: 161516 tcatcggctccatcatctcc 161497
>emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 in linkage group 21, complete sequence Length = 169747 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gagggtgaggaggagaagaa 23 |||||||||||||||||||| Sbjct: 57843 gagggtgaggaggagaagaa 57862 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,591,611 Number of Sequences: 3902068 Number of extensions: 3591611 Number of successful extensions: 107454 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104615 Number of HSP's gapped (non-prelim): 2829 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
