ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet08h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (AC... 474 e-131
2gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltran... 387 e-104
3ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predic... 115 7e-23
4emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 115 7e-23
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 115 7e-23
6dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 3e-19
7ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predic... 86 6e-14
8gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.053
9dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 44 0.21
10ref|XM_465240.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.82
11ref|XM_507475.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 0.82
12ref|XM_506788.2| PREDICTED Oryza sativa (japonica cultivar-group... 42 0.82
13ref|XM_596207.2| PREDICTED: Bos taurus similar to myosin light c... 42 0.82
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.82
15dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.82
16dbj|AK107002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.82
17dbj|AK106848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.82
18dbj|AK102703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.82
19ref|NM_102471.3| Arabidopsis thaliana unknown protein AT1G27090 ... 40 3.2
20ref|NM_184874.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.2
21gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosom... 40 3.2
22ref|XM_583699.2| PREDICTED: Bos taurus CE5 protein-like (LOC5071... 40 3.2
23gb|AC116450.17| Mus musculus chromosome 7, clone RP24-249O20, co... 40 3.2
24gb|AY317642.1| Mus musculus olfactory receptor Olfr533 (Olfr533)... 40 3.2
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.2
26gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosom... 40 3.2
27gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome... 40 3.2
28gb|AC117670.15| Mus musculus chromosome 7, clone RP23-383P11, co... 40 3.2
29ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA 40 3.2
30gb|AY091390.1| Arabidopsis thaliana unknown protein (At1g27090) ... 40 3.2
31gb|AY074367.1| Arabidopsis thaliana unknown protein (At1g27090) ... 40 3.2
32gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete se... 40 3.2
33gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds 40 3.2
34gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC... 40 3.2
35gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 3.2
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
37ref|NM_001011815.1| Mus musculus olfactory receptor 533 (Olfr533... 40 3.2
38dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 3.2
39gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana... 40 3.2
40gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 3.2
41dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
42gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, co... 40 3.2
43gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 3.2
44gb|U79644.1|LDU79644 Lymantria dispar nucleopolyhedrovirus, isol... 40 3.2 
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
           cds
          Length = 1508

 Score =  474 bits (239), Expect = e-131
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 553

                                                                       
Query: 73  gaccgtgcttccttcttccatccccgcgaaccgctgcacgtcgagtacgagcaccgtggc 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaccgtgcttccttcttccatccccgcgaaccgctgcacgtcgagtacgagcaccgtggc 613

                                                                       
Query: 133 gtcgagttcaagccctacgagaaggcacacgacgttgtctgtggtgcggacggcgacgag 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtcgagttcaagccctacgagaaggcacacgacgttgtctgtggtgcggacggcgacgag 673

                                                                      
Query: 193 gacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaagctcaaggc 251
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaagctcaaggc 732
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>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA,
           partial cds
          Length = 1220

 Score =  387 bits (195), Expect = e-104
 Identities = 228/239 (95%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 72
           ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 229 ttcttcgtcgcctggagccaggccacccgcggtgccgccatcgaccccgtcccggtgcac 288

                                                                       
Query: 73  gaccgtgcttccttcttccatccccgcgaaccgctgcacgtcgagtacgagcaccgtggc 132
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaccgcgcttccttcttccatccccgcgaaccgctgcacgtcgagtacgagcaccgtggc 348

                                                                       
Query: 133 gtcgagttcaagccctacgagaaggcacacgacgttgtctgtggtgcggacggcgacgag 192
           |||||||||||||||| ||||||||  ||||||||||| |||||||| || |||||||| 
Sbjct: 349 gtcgagttcaagccctgcgagaaggtgcacgacgttgtatgtggtgctgatggcgacgac 408

                                                                      
Query: 193 gacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaagctcaaggc 251
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 409 gacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaggctcaaggc 467
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>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score =  115 bits (58), Expect = 7e-23
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 72
           |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 490 ttcttcctcgcgtggagccaggccacccgcggcgtcgccatccaccccgtcccggtgcac 549

                             
Query: 73  gaccgtgcttccttcttc 90
           ||||| || |||||||||
Sbjct: 550 gaccgcgcctccttcttc 567



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 65/73 (89%), Gaps = 3/73 (4%)
 Strand = Plus / Plus

                                                                       
Query: 182 acggcgacgaggacgaggtggtggtga---acaaggtgcacttcagccgggagttcatct 238
           ||||| |||| | ||||||||||||||   ||||||||||||||||  ||||||||||||
Sbjct: 671 acggccacgacggcgaggtggtggtgacacacaaggtgcacttcagtagggagttcatct 730

                        
Query: 239 ccaagctcaaggc 251
           |||||||||||||
Sbjct: 731 ccaagctcaaggc 743
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>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score =  115 bits (58), Expect = 7e-23
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                         
Query: 13    ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 72
             |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 14747 ttcttcctcgcgtggagccaggccacccgcggcgtcgccatccaccccgtcccggtgcac 14688

                               
Query: 73    gaccgtgcttccttcttc 90
             ||||| || |||||||||
Sbjct: 14687 gaccgcgcctccttcttc 14670



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                         
Query: 183   cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 242
             ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 10946 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 11005

                    
Query: 243   gctcaag 249
             |||||||
Sbjct: 11006 gctcaag 11012



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 65/73 (89%), Gaps = 3/73 (4%)
 Strand = Plus / Minus

                                                                         
Query: 182   acggcgacgaggacgaggtggtggtga---acaaggtgcacttcagccgggagttcatct 238
             ||||| |||| | ||||||||||||||   ||||||||||||||||  ||||||||||||
Sbjct: 14566 acggccacgacggcgaggtggtggtgacacacaaggtgcacttcagtagggagttcatct 14507

                          
Query: 239   ccaagctcaaggc 251
             |||||||||||||
Sbjct: 14506 ccaagctcaaggc 14494



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 112   gtcgagtacgagcaccgtggcgtcgagttcaagccctacga 152
             ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 10872 gtcgagttcgagcaccgtggcgtggagttcaagccgtacga 10912



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 26    ggagccaggccacccgcggcgccgc 50
             |||||||||||||||||||||||||
Sbjct: 10787 ggagccaggccacccgcggcgccgc 10811
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  115 bits (58), Expect = 7e-23
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                            
Query: 13       ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 72
                |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 33963850 ttcttcctcgcgtggagccaggccacccgcggcgtcgccatccaccccgtcccggtgcac 33963791

                                  
Query: 73       gaccgtgcttccttcttc 90
                ||||| || |||||||||
Sbjct: 33963790 gaccgcgcctccttcttc 33963773



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                            
Query: 183      cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 242
                ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 33960049 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 33960108

                       
Query: 243      gctcaag 249
                |||||||
Sbjct: 33960109 gctcaag 33960115



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 65/73 (89%), Gaps = 3/73 (4%)
 Strand = Plus / Minus

                                                                            
Query: 182      acggcgacgaggacgaggtggtggtga---acaaggtgcacttcagccgggagttcatct 238
                ||||| |||| | ||||||||||||||   ||||||||||||||||  ||||||||||||
Sbjct: 33963669 acggccacgacggcgaggtggtggtgacacacaaggtgcacttcagtagggagttcatct 33963610

                             
Query: 239      ccaagctcaaggc 251
                |||||||||||||
Sbjct: 33963609 ccaagctcaaggc 33963597



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 112      gtcgagtacgagcaccgtggcgtcgagttcaagccctacga 152
                ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 33959975 gtcgagttcgagcaccgtggcgtggagttcaagccgtacga 33960015



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 26       ggagccaggccacccgcggcgccgc 50
                |||||||||||||||||||||||||
Sbjct: 33959890 ggagccaggccacccgcggcgccgc 33959914
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>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
           insert sequence
          Length = 1640

 Score =  103 bits (52), Expect = 3e-19
 Identities = 118/140 (84%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccccgtcccggtgcac 72
           |||||| |||||||||||||||||||||||||||||||| || |||| ||||| ||||||
Sbjct: 587 ttcttcctcgcgtggagccaggccacccgcggcgccgccttccaccctgtccccgtgcac 646

                                                                       
Query: 73  gaccgtgcttccttcttccatccccgcgaaccgctgcacgtcgagtacgagcaccgtggc 132
           ||||| |  |||||||||   || |||||  | |   | ||||||| |||||||||||||
Sbjct: 647 gaccgcgtctccttcttcgcgccgcgcgacactcccaaggtcgagttcgagcaccgtggc 706

                               
Query: 133 gtcgagttcaagccctacga 152
           || ||||||||||| |||||
Sbjct: 707 gtggagttcaagccgtacga 726



 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                       
Query: 183 cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 242
           ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 760 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 819

                  
Query: 243 gctcaag 249
           |||||||
Sbjct: 820 gctcaag 826
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>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                       
Query: 183 cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 242
           ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 606 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 665

                  
Query: 243 gctcaag 249
           |||||||
Sbjct: 666 gctcaag 672



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 112 gtcgagtacgagcaccgtggcgtcgagttcaagccctacga 152
           ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 532 gtcgagttcgagcaccgtggcgtggagttcaagccgtacga 572



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 26  ggagccaggccacccgcggcgccgc 50
           |||||||||||||||||||||||||
Sbjct: 447 ggagccaggccacccgcggcgccgc 471
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 29     gccaggccacccgcggcgccgccatcg 55
              |||||||||||| ||||||||||||||
Sbjct: 430734 gccaggccaccctcggcgccgccatcg 430760
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 31     caggccacccgcggcgccgccatcga 56
              ||||||| ||||||||||||||||||
Sbjct: 698783 caggccatccgcggcgccgccatcga 698758
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>ref|XM_465240.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1890

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 981  ggacggcgacgaggacgacgtggtg 1005
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>ref|XM_507475.1| PREDICTED Oryza sativa (japonica cultivar-group), P0572D06.2 mRNA
          Length = 2167

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 1219 ggacggcgacgaggacgacgtggtg 1243
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>ref|XM_506788.2| PREDICTED Oryza sativa (japonica cultivar-group), P0572D06.2 mRNA
          Length = 2830

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 1433 ggacggcgacgaggacgacgtggtg 1457
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>ref|XM_596207.2| PREDICTED: Bos taurus similar to myosin light chain kinase
            (LOC518025), mRNA
          Length = 1518

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  ccgggagttcatctccaagct 245
            |||||||||||||||||||||
Sbjct: 1317 ccgggagttcatctccaagct 1337
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 180      ggacggcgacgaggacgaggtggtg 204
                |||||||||||||||||| ||||||
Sbjct: 12503801 ggacggcgacgaggacgacgtggtg 12503777
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>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0572D06
          Length = 148920

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 8334 ggacggcgacgaggacgacgtggtg 8310
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>dbj|AK107002.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C10, full
            insert sequence
          Length = 2167

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 1219 ggacggcgacgaggacgacgtggtg 1243
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>dbj|AK106848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A09, full
            insert sequence
          Length = 2830

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 1433 ggacggcgacgaggacgacgtggtg 1457
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>dbj|AK102703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103O07, full
            insert sequence
          Length = 1890

 Score = 42.1 bits (21), Expect = 0.82
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 180  ggacggcgacgaggacgaggtggtg 204
            |||||||||||||||||| ||||||
Sbjct: 981  ggacggcgacgaggacgacgtggtg 1005
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>ref|NM_102471.3| Arabidopsis thaliana unknown protein AT1G27090 mRNA, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  ggcgacgaggacgaggtggtggtg 207
            ||||| ||||||||||||||||||
Sbjct: 1231 ggcgaggaggacgaggtggtggtg 1254
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>ref|NM_184874.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 181 gacggcgacgaggacgaggtggtggtgaacaaggtg 216
           |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 697 gacggcgaggaggaggaggaggtggtgaacagggtg 732
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>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003G23, complete sequence
          Length = 135931

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 181   gacggcgacgaggacgaggtggtggtgaacaaggtg 216
             |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 72959 gacggcgaggaggaggaggaggtggtgaacagggtg 72994
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>ref|XM_583699.2| PREDICTED: Bos taurus CE5 protein-like (LOC507141), mRNA
          Length = 783

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 ccacccgcggcgccgccatc 54
          ||||||||||||||||||||
Sbjct: 59 ccacccgcggcgccgccatc 78
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>gb|AC116450.17| Mus musculus chromosome 7, clone RP24-249O20, complete sequence
          Length = 142066

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gagttcatctccaagctcaa 248
              ||||||||||||||||||||
Sbjct: 107332 gagttcatctccaagctcaa 107351
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>gb|AY317642.1| Mus musculus olfactory receptor Olfr533 (Olfr533) gene, complete
           cds
          Length = 963

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 gagttcatctccaagctcaa 248
           ||||||||||||||||||||
Sbjct: 947 gagttcatctccaagctcaa 928
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 181      gacggcgacgaggacgaggtggtggtgaacaaggtg 216
                |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 26761253 gacggcgaggaggaggaggaggtggtgaacagggtg 26761218
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>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete
             sequence
          Length = 169661

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   tggtggtgaacaaggtgcacttca 223
             |||||||||||||||||| |||||
Sbjct: 39999 tggtggtgaacaaggtgctcttca 39976
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>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence
          Length = 186870

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    tggtggtgaacaaggtgcacttca 223
              |||||||||||||||||| |||||
Sbjct: 185493 tggtggtgaacaaggtgctcttca 185470
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>gb|AC117670.15| Mus musculus chromosome 7, clone RP23-383P11, complete sequence
          Length = 219661

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    gagttcatctccaagctcaa 248
              ||||||||||||||||||||
Sbjct: 161923 gagttcatctccaagctcaa 161904
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>ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA
          Length = 3550

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 cgacgaggacgaggtggtggtgaa 209
           |||||||||| |||||||||||||
Sbjct: 647 cgacgaggaccaggtggtggtgaa 670
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>gb|AY091390.1| Arabidopsis thaliana unknown protein (At1g27090) mRNA, complete cds
          Length = 1294

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  ggcgacgaggacgaggtggtggtg 207
            ||||| ||||||||||||||||||
Sbjct: 1073 ggcgaggaggacgaggtggtggtg 1096
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>gb|AY074367.1| Arabidopsis thaliana unknown protein (At1g27090) mRNA, complete cds
          Length = 1552

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 184  ggcgacgaggacgaggtggtggtg 207
            ||||| ||||||||||||||||||
Sbjct: 1231 ggcgaggaggacgaggtggtggtg 1254
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>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   ggacggcgacgaggacgagg 199
             ||||||||||||||||||||
Sbjct: 32903 ggacggcgacgaggacgagg 32884
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>gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds
          Length = 3550

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 cgacgaggacgaggtggtggtgaa 209
           |||||||||| |||||||||||||
Sbjct: 647 cgacgaggaccaggtggtggtgaa 670
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>gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC:65770
           IMAGE:6789078), complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 cgacgaggacgaggtggtggtgaa 209
           |||||||||| |||||||||||||
Sbjct: 644 cgacgaggaccaggtggtggtgaa 667
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     cgaggacgaggtggtggtga 208
               ||||||||||||||||||||
Sbjct: 3716953 cgaggacgaggtggtggtga 3716972
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 181      gacggcgacgaggacgaggtggtggtgaacaaggtg 216
                |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 26852576 gacggcgaggaggaggaggaggtggtgaacagggtg 26852541
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>ref|NM_001011815.1| Mus musculus olfactory receptor 533 (Olfr533), mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 gagttcatctccaagctcaa 248
           ||||||||||||||||||||
Sbjct: 947 gagttcatctccaagctcaa 928
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     gcggacggcgacgaggacga 197
               ||||||||||||||||||||
Sbjct: 5632372 gcggacggcgacgaggacga 5632391
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>gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I,
             complete sequence
          Length = 111566

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   ggcgacgaggacgaggtggtggtg 207
             ||||| ||||||||||||||||||
Sbjct: 45865 ggcgaggaggacgaggtggtggtg 45842
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      cacccgcggcgccgccatcg 55
               ||||||||||||||||||||
Sbjct: 2988002 cacccgcggcgccgccatcg 2988021
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>dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B07, full
           insert sequence
          Length = 1424

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 181 gacggcgacgaggacgaggtggtggtgaacaaggtg 216
           |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 666 gacggcgaggaggaggaggaggtggtgaacagggtg 701
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>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome
          Length = 161046

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   ggacggcgacgaggacgagg 199
             ||||||||||||||||||||
Sbjct: 56855 ggacggcgacgaggacgagg 56836
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    gttcaagccctacgagaagg 157
              ||||||||||||||||||||
Sbjct: 876310 gttcaagccctacgagaagg 876329
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>gb|U79644.1|LDU79644 Lymantria dispar nucleopolyhedrovirus, isolate 163-2, 25K FP fusion
           protein gene, complete cds
          Length = 650

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 ggacggcgacgaggacgagg 199
           ||||||||||||||||||||
Sbjct: 65  ggacggcgacgaggacgagg 46


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,648,891
Number of Sequences: 3902068
Number of extensions: 1648891
Number of successful extensions: 37358
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36876
Number of HSP's gapped (non-prelim): 479
length of query: 251
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 229
effective length of database: 17,147,199,772
effective search space: 3926708747788
effective search space used: 3926708747788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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