ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet08g06 |
|---|---|
| Clone Library Name | barley_pub |
>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor| Length = 252 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +2 Query: 134 YAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSG-WVAWGVNQDAPAMAGARVIAA 310 + C LP + L +TY++ N++L AF + +G WVAW +N MAG++ A Sbjct: 40 FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLA 99 Query: 311 FSDPSTGALLALPFVLSA 364 + A + + +S+ Sbjct: 100 YRSGGGAAPVVKTYNISS 117
>IE63_HHV2H (P28276) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 33.9 bits (76), Expect = 0.097 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = -2 Query: 349 REREQRARGRVGEGGDHARPSHGRRVLVDA----PRHPSRRRDEGP 224 R +R RGR G GG + P RRV +A RHP+ R +GP Sbjct: 141 RRGRRRGRGRYGPGGADSTPKPRRRVSRNAHNQGGRHPASARTDGP 186
>KHSE_PYRKO (Q5JH53) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 292 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +2 Query: 146 IALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNQDAPAMAGARVIAAF 313 IALP + + W A LDA G+F+S SG + + +D A+ G + AF Sbjct: 217 IALPYRLRLMPWFARVWKAALDAGAYGAFVSGSGPAIFALGEDLHAI-GKAIAEAF 271
>Y202_MYCPN (Q50286) Very hypothetical adhesin P1-like protein MPN202| (GT9_orf313) Length = 313 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = -3 Query: 324 DGSEKAAITRAPAMAGASWLTPHATHPDGE---MKDPVKAASSVALRASYVH 178 D +++A I PA++G SW P GE + V +SSV L Y H Sbjct: 225 DATQRALIWAPPALSGLSWQLGQPVGPRGECVGFEGGVGGSSSVRLARIYHH 276
>RGS1_CAEEL (P34295) Regulator of G protein signaling rgs-1| Length = 201 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = -2 Query: 376 ELDVGGEHEREREQRA 329 E+D+GG+ E+EREQRA Sbjct: 164 EMDIGGDEEKEREQRA 179
>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze| glycopeptide polyprotein) (AFGP polyprotein) [Contains: AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment) Length = 790 Score = 29.6 bits (65), Expect = 1.8 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 5/90 (5%) Frame = +2 Query: 110 TTSTPVKA---YAKCIALPTQGATLAWTYDARNATLDAAFTGSF--ISPSGWVAWGVNQD 274 T +TP A +A A P AT A + A AT T +F + + A Sbjct: 674 TAATPATAALNFAATAATPATAATPALIFAATAATAATPATAAFNFAATAATAATPATAA 733 Query: 275 APAMAGARVIAAFSDPSTGALLALPFVLSA 364 PA+ A A + P+T A AL F +A Sbjct: 734 TPALIFAATAATAATPATPATPALIFAATA 763
>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)| Length = 777 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/68 (30%), Positives = 30/68 (44%) Frame = -3 Query: 366 SAESTNGSASSAPVDGSEKAAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRAS 187 S +T AS V + + PA+AGA + P P + PV ++VA + Sbjct: 106 SGANTGNPASEEMVRMLAEVSGQTPPAIAGARPVAPPPAPPPAPVAAPVVTPAAVAAPPA 165 Query: 186 YVHASVAP 163 V A VAP Sbjct: 166 PVQAPVAP 173
>SEC14_YARLI (P45816) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 492 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Frame = -3 Query: 351 NGSASSAPVDGSEKAAITRAPAMAGAS---WLTPHATHPDGEMKDPVKAASSVALRASYV 181 NG+ ++A G+ AA A A AGAS P P K PV AA+ A + Sbjct: 334 NGNGAAAAAAGAGTAAAGGAAAAAGASSSKQAAPAQAAPAQAAKAPVPAAAKTATAPAPT 393 Query: 180 HASVAPCVGS 151 + AP S Sbjct: 394 GKTAAPQTNS 403
>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 225 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 10/78 (12%) Frame = -3 Query: 366 SAESTNGSASSAPVDGSEKAAITRAPAMAG----------ASWLTPHATHPDGEMKDPVK 217 SAEST + +AP +G K T APA AG AS P + P K+ Sbjct: 127 SAESTGAADGAAPEEGEAKK--TEAPAAAGPEAKSDAAPAASDSKPSSAEPAPSSKE-TP 183 Query: 216 AASSVALRASYVHASVAP 163 AAS A+ A AP Sbjct: 184 AASEAPSSAAKAPAPAAP 201
>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 367 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -2 Query: 355 HEREREQRARGRVGEGGDHARPSHGRRVLVDAPR 254 +E +E ++ EGG RPS GRRV V+ P+ Sbjct: 321 YEMLKEINEALQLAEGGSAPRPSKGRRVKVEGPQ 354
>OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) (Fragment)| Length = 324 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/74 (28%), Positives = 35/74 (47%) Frame = -3 Query: 369 TSAESTNGSASSAPVDGSEKAAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRA 190 T+ +TN S SS+ + S+ A AP+ A + A + + KAA++ A A Sbjct: 215 TNNSTTNSSHSSSAIS-SQSAITVAAPSAAATGAPSATAAAIASDQQQVSKAAAAAAAAA 273 Query: 189 SYVHASVAPCVGSA 148 + +AS A +A Sbjct: 274 ALSNASAAAAAAAA 287
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 28.9 bits (63), Expect = 3.1 Identities = 26/82 (31%), Positives = 36/82 (43%) Frame = -3 Query: 375 SLTSAESTNGSASSAPVDGSEKAAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVAL 196 S T S N S SAP S +I +PA + AS ++ + P + P AA+ AL Sbjct: 135 SSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFAS-ISASPSTPTTTLAPPTTAAAG-AL 192 Query: 195 RASYVHASVAPCVGSAMHLAYA 130 S +S + SA A A Sbjct: 193 AGSPTSSSPSSSAASAAAAAAA 214
>CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (PPIase| 1) (Cyclophilin) (BmCYP-1) Length = 843 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = -2 Query: 358 EHEREREQRARGRVGEGGDHARPSHGRRVLVDAPRHPSRRRDEG 227 EH+R R+R R R S RR RH SR R G Sbjct: 694 EHKRNERSRSRRRRSRSNGRRRRSSSRRSRSRDRRHKSRSRSRG 737
>PUR2_RHILO (Q986A5) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)| (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) Length = 425 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +2 Query: 113 TSTPVKAYAKCIALPTQGATLAWTYDARNATLDAAFTGSF 232 T P+ A +A +G T+A T D A LDA F GSF Sbjct: 136 TGAPIVIKADGLAAG-KGVTVAMTSDEARAALDACFEGSF 174
>NDK_DESVH (Q729L7) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP| kinase) (Nucleoside-2-P kinase) Length = 139 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -3 Query: 255 ATHPDGEMKDPVKAASSVALRASYVHASVAPCVGSAMHLAYAFTGVDVV 109 AT+P + ++ +V+L A+ VH S AP +A ++Y F +++V Sbjct: 91 ATNPANAAEGTIRKKYAVSLEANSVHGSDAP-ETAAFEISYFFNALEIV 138
>RNPA_THEFI (Q7X5L2) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 240 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 346 EREQRARGRVGEGGDHARPSHGRRVLVDAPRHPSRRRDEGP 224 E ++RA G + + A P H RV+ P HP R+D GP Sbjct: 24 EDQERAEGAEAQAAEGAPPPH--RVI---PPHPGLRQDGGP 59
>CUT_DROME (P10180) Homeobox protein cut| Length = 2175 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -3 Query: 375 SLTSAESTNGSASSAPVDGSEKAAITRAPAMAGASW 268 S+ S EST S+SS+ S A +T A A A A W Sbjct: 2139 SIVSGESTTSSSSSSNTSSSTPA-VTTAAATAAAGW 2173
>RNH_ZYMMO (O69014) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 156 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -3 Query: 306 AITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVAL 196 A+TR +A W+ HA HPD E D + + +++AL Sbjct: 115 ALTRQHDIAW-KWVKGHAGHPDNERADQLASDAAIAL 150
>PTPR2_HUMAN (Q92932) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (Islet cell autoantigen-related protein) (ICAAR) (IAR) (Phogrin) Length = 1015 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -2 Query: 382 GLELDVGGEHEREREQRARGRVGEGGDHARPSHGRRVLVDAPR 254 GL+L+V + E+ ARG + D RP GRR++ D R Sbjct: 498 GLQLEV-----QPSEEEARGYIVTDRDPLRPEEGRRLVEDVAR 535
>L100_ADE40 (P11823) Late 100 kDa protein| Length = 770 Score = 28.5 bits (62), Expect = 4.1 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +1 Query: 238 AVGMGG-VGRQPGRAG--HGWGARDRRLLRPVHG 330 AVG GG VGRQPGR G G D L +P G Sbjct: 693 AVGRGGDVGRQPGRGSFRRGGGGADGELGQPRRG 726
>AMPA_CORDI (Q6NG90) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 500 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 Query: 205 AGRGLHGVLHLAVGMGGVGRQPGRAGHGWGA 297 A R L GV H+A +G G QP G GA Sbjct: 109 AARSLAGVQHVATTLGAFGLQPAVEGFALGA 139
>ACPS_STRCO (O86785) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)| (Holo-ACP synthase) (4'-phosphopantetheinyl transferase acpS) Length = 123 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -3 Query: 309 AAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYVHASVAP 163 AA+ R PA+AG +L P GE + A+ A + + A AP Sbjct: 18 AALERTPALAGRLFLESELLLPGGERRGVASLAARFAAKEALAKALGAP 66
>NGN2_HUMAN (Q9H2A3) Neurogenin 2| Length = 272 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -2 Query: 346 EREQRARGRVGEGGDHARPSHGRRVLVDAPRHPSRRR 236 E Q ARG V G + RP+ ++ D R PSR R Sbjct: 58 EAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRAR 94
>DNAJ_ERWCT (Q6D0B8) Chaperone protein dnaJ| Length = 379 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -2 Query: 316 GEGGDHARPSHGRRVLVDAPRHPSRRRDE 230 GE GDH PS V V HP +R+E Sbjct: 235 GEAGDHGAPSGDLYVQVQVKAHPIFQREE 263
>NANH_MICVI (Q02834) Sialidase precursor (EC 3.2.1.18) (Neuraminidase)| Length = 647 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +2 Query: 158 TQGATLAWTYDARNATLDAAFTGSFI---SPSGWVAWGVNQDAPAMAGARVIAAFSDPS 325 T L +YD R +DA S + S G WG Q A I FSDPS Sbjct: 75 TPDGDLLASYDGRPTGIDAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPS 133
>NDK_BRUME (Q8YGA4) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP| kinase) (Nucleoside-2-P kinase) Length = 140 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/49 (30%), Positives = 29/49 (59%) Frame = -3 Query: 255 ATHPDGEMKDPVKAASSVALRASYVHASVAPCVGSAMHLAYAFTGVDVV 109 AT+P + ++ A ++++ + VH S AP +A +AY F+G ++V Sbjct: 92 ATNPANADEGTIRKAFALSIGENSVHGSDAP-ETAAEEIAYWFSGTEIV 139
>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 677 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 176 AWTYDARNATLDAAFTGSFISPSG 247 AW +++ N TL A + G+F PSG Sbjct: 538 AWAHNSSNYTLPAFYMGNFSIPSG 561
>MAGD4_HUMAN (Q96JG8) Melanoma-associated antigen D4 (MAGE-D4 antigen) (MAGE-E1| antigen) Length = 741 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -3 Query: 378 WSLTSAESTNGSASSAPVDGSEKAAI--TRAPAMAGASWLT 262 W + TNG AS++ +DG ++ TR A AGAS+ + Sbjct: 696 WRAGVSSGTNGGASTSVLDGPSTSSTIRTRNAARAGASFFS 736
>GLUQ_SYNPX (Q7U8M8) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 293 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%) Frame = +1 Query: 247 MGGVGRQPGRA---GHGWGARDRRL 312 + G+ R PG G GWG RDRRL Sbjct: 125 LAGLARYPGTCRDGGAGWGWRDRRL 149
>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 682 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +2 Query: 176 AWTYDARNATLDAAFTGSFISPSG 247 AW + + N TL A + G+F PSG Sbjct: 538 AWAHSSSNYTLPAFYVGNFSIPSG 561
>RNFC_SALTY (Q8ZPM2) Electron transport complex protein rnfC| Length = 735 Score = 27.7 bits (60), Expect = 7.0 Identities = 20/55 (36%), Positives = 25/55 (45%) Frame = -3 Query: 360 ESTNGSASSAPVDGSEKAAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSVAL 196 E GS + P+D KAA+ A A A A A E DP KAA + A+ Sbjct: 665 EQQTGSEPAEPID-PRKAAVEAAIARAKARKQEQQAGSEPAEPADPRKAAVAAAI 718
>KITH_BHV5 (P36226) Thymidine kinase (EC 2.7.1.21)| Length = 350 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/67 (32%), Positives = 28/67 (41%) Frame = +2 Query: 149 ALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNQDAPAMAGARVIAAFSDPST 328 A P A + RNA A T +F+ G AW DA A A +AA +DP Sbjct: 183 ARPGDRADAGFWPPLRNAYALLANTCAFLGAGG--AWRDGWDALGWADADALAALADPRG 240 Query: 329 GALLALP 349 G +P Sbjct: 241 GGREPVP 247
>BGAM_HUMAN (P16279) Beta-galactosidase-related protein precursor| (Beta-galactosidase-like protein) (S-Gal) (Elastin-binding protein) (EBP) Length = 546 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 176 AWTYDARNATLDAAFTGSFISPSG 247 AW +++ N TL A + G+F PSG Sbjct: 407 AWAHNSSNYTLPAFYMGNFSIPSG 430
>PTPR2_MACNE (O02695) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (M1851) Length = 1013 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 382 GLELDVGGEHEREREQRARGRVGEGGDHARPSHGRRVLVDAPR 254 GL+L+V + E+ ARG + D RP GR+++ D R Sbjct: 496 GLQLEV-----KPSEEEARGYIVTDRDPLRPEEGRQLVEDVAR 533
>PSAA_PROMM (Q7V510) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)| Length = 776 Score = 27.3 bits (59), Expect = 9.1 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 13/72 (18%) Frame = +2 Query: 134 YAKCIALPTQ---GATLAWTY---DARNATLDAAFTGSFISPSG----WVAWGVNQDAPA 283 Y+ +A PT A + W + NA + A F G I+ SG W AWG+ + Sbjct: 104 YSGWLADPTHVKASAQVVWPIVGQEIMNADMGAGFNGIQIT-SGIFQMWRAWGITSETEL 162 Query: 284 MA---GARVIAA 310 MA GA ++AA Sbjct: 163 MALATGALIMAA 174
>PSAA_PROMP (Q9RC08) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)| Length = 767 Score = 27.3 bits (59), Expect = 9.1 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 13/72 (18%) Frame = +2 Query: 134 YAKCIALPTQ---GATLAWTY---DARNATLDAAFTGSFISPSG----WVAWGVNQDAPA 283 Y+ +A PT GA W + N L A + G IS SG W AWG+ ++ Sbjct: 104 YSGWLADPTHVKPGAQQVWAIVGQEMLNGDLGANYNGIQIS-SGVFHMWRAWGITNESEL 162 Query: 284 MA---GARVIAA 310 MA GA V+AA Sbjct: 163 MALAIGAVVMAA 174
>AMYG_ASPOR (P36914) Glucoamylase precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 612 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Frame = -3 Query: 378 WSLTSAESTNGSASSAPVDGS-EKAAITRAPAMAGASWLTPHATHPDGEMKDPVKAASSV 202 W T+A S + S+ G+ IT P ++G + PD + P + + Sbjct: 463 WGETAATSIPSACSTTSASGTYSSVVITSWPTISG------YPGAPDSPCQVPTTVSVTF 516 Query: 201 ALRASYVHASVAPCVGSAMHL 139 A++A+ V+ VGS L Sbjct: 517 AVKATTVYGESIKIVGSISQL 537
>SED1_YEAST (Q01589) Protein SED1 precursor| Length = 338 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -3 Query: 369 TSAESTNGSASSAPVDGSEKAAITRAPAMAGASWLTPHATHP 244 T+A TNG+++ AP D + +A T P S P + P Sbjct: 108 TTALPTNGTSTEAPTDTTTEAPTTGLPTNGTTSAFPPTTSLP 149
>ENO_SYNPX (Q7U3T1) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 430 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = -3 Query: 351 NGSASSAPVDGSEKAAIT---RAPAMAGASWLTPHATHPDGEMKDPVKAASSVALRASYV 181 N +A+S + ++ ++T +A +AG S T +H GE +D A SVA RA + Sbjct: 329 NSTANSILIKVNQIGSLTETLQAIDLAGRSGYTSVISHRSGETEDTTIADLSVATRAGQI 388
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = -2 Query: 352 EREREQRARGRVGEGGDHARPSHGRRVLV----DAPRHPSRRRDEG 227 +R + +GR + D A P +GRR+ V PR P++R+ G Sbjct: 447 KRGARKSTKGRASDIRDAATPKNGRRLSVKKESPTPRLPAKRQANG 492 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,416,755 Number of Sequences: 219361 Number of extensions: 598976 Number of successful extensions: 2913 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2757 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2906 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
