ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet08f06 |
|---|---|
| Clone Library Name | barley_pub |
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 72.8 bits (177), Expect = 4e-13 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 4/149 (2%) Frame = +1 Query: 10 EFFVAWSQATRGAAIDPVPVHDRASFFHPREPLHVEYEHRGVEFKPYEKA--HDVVCGAD 183 EF +W++ +G PVHDR PR P ++Y H +F+P+ + ++++ G Sbjct: 174 EFNNSWARIAKGLLPALEPVHDRYLHLRPRNPPQIKYSHS--QFEPFVPSLPNELLDGKT 231 Query: 184 GDEDEVVVNKVHFSREFISKLKAQAS-AGAPRPCSTLQCVVAHLWRSMTMARGLDGGETT 360 + + SRE I+ LK + + ST + V AH+WRS++ ARGL E Sbjct: 232 NKSQTLFI----LSREQINTLKQKLDLSNNTTRLSTYEVVAAHVWRSVSKARGLSDHEEI 287 Query: 361 SVAIAVDGRARM-SPQVPDGYXRHVILWA 444 + + VDGR+R+ +P +P GY +V+ A Sbjct: 288 KLIMPVDGRSRINNPSLPKGYCGNVVFLA 316
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 68.2 bits (165), Expect = 9e-12 Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 4/149 (2%) Frame = +1 Query: 10 EFFVAWSQATRGAAIDPVPVHDRASFFHPREPLHVEYEHRGVEFKPYEKA--HDVVCGAD 183 EF +W++ +G PVHDR PR P ++Y H +F+P+ + +++ G Sbjct: 174 EFNNSWARIAKGLLPALEPVHDRYLHLCPRNPPQIKYTHS--QFEPFVPSLPKELLDGKT 231 Query: 184 GDEDEVVVNKVHFSREFISKLKAQAS-AGAPRPCSTLQCVVAHLWRSMTMARGLDGGETT 360 + SRE I+ LK + + ST + V H+WRS++ ARGL E Sbjct: 232 SKSQTLF----KLSREQINTLKQKLDWSNTTTRLSTYEVVAGHVWRSVSKARGLSDHEEI 287 Query: 361 SVAIAVDGRARM-SPQVPDGYXRHVILWA 444 + + VDGR+R+ +P +P GY +V+ A Sbjct: 288 KLIMPVDGRSRINNPSLPKGYCGNVVFLA 316
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 67.4 bits (163), Expect = 2e-11 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 5/150 (3%) Frame = +1 Query: 10 EFFVAWSQATRGAAIDPVPVHDRASFFHPREPLHVEYEHRGVEFKPYEKA--HDVVCGAD 183 EF +W++ +G PVHDR R P ++Y H +F+P+ + ++++ G Sbjct: 174 EFNNSWARIAKGLLPALEPVHDRYLHLRLRNPPQIKYTHS--QFEPFVPSLPNELLDGKT 231 Query: 184 GDEDEVVVNKVHFSREFISKLKAQA--SAGAPRPCSTLQCVVAHLWRSMTMARGLDGGET 357 + SRE I+ LK + S+ ST + V H+WRS++ ARGL E Sbjct: 232 NKSQTLF----KLSREQINTLKQKLDLSSNTTTRLSTYEVVAGHVWRSVSKARGLSDHEE 287 Query: 358 TSVAIAVDGRARM-SPQVPDGYXRHVILWA 444 + + VDGR+R+ +P +P GY +V+ A Sbjct: 288 IKLIMPVDGRSRINNPSLPKGYCGNVVFLA 317
>ADA28_HUMAN (Q9UKQ2) ADAM 28 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 28) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein-L) (MDC-L) (eMDC II) (ADAM23) Length = 775 Score = 32.7 bits (73), Expect = 0.43 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 73 DRASFFHPREPLHVE-YEHRGVEFKPYEKAHDVVCGADG 186 D+ F P P+H + EH ++ P EK +D CG DG Sbjct: 135 DQRYFIEPLSPIHRDGQEHALFKYNPDEKNYDSTCGMDG 173
>ADA28_MACFA (Q9XSL6) ADAM 28 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 28) (eMDC II) Length = 776 Score = 31.6 bits (70), Expect = 0.95 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +1 Query: 85 FFHPREPLHVE-YEHRGVEFKPYEKAHDVVCGADG 186 F P P+H + EH ++ P EK +D CG DG Sbjct: 140 FIEPLSPIHRDGQEHALFKYDPEEKNYDSTCGTDG 174
>CNOT2_MOUSE (Q8C5L3) CCR4-NOT transcription complex subunit 2 (CCR4-associated| factor 2) Length = 540 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 425 RXYPSGTCGLIRALPSTAMATLVV-SPPSSPRAIVMLRHRCATTHCRVLQGLGAPADACA 249 R GT P+T + T+ + +PPS R I+ + R H +V QG+G P+ + Sbjct: 98 RSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNS 157 Query: 248 LS 243 +S Sbjct: 158 MS 159
>CNOT2_HUMAN (Q9NZN8) CCR4-NOT transcription complex subunit 2 (CCR4-associated| factor 2) Length = 540 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 425 RXYPSGTCGLIRALPSTAMATLVV-SPPSSPRAIVMLRHRCATTHCRVLQGLGAPADACA 249 R GT P+T + T+ + +PPS R I+ + R H +V QG+G P+ + Sbjct: 98 RSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNS 157 Query: 248 LS 243 +S Sbjct: 158 MS 159
>ISPE_MANSM (Q65SB8) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 302 Score = 30.0 bits (66), Expect = 2.8 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +1 Query: 325 TMARGLDGGETTSVAIAVDGRARMSPQVPD 414 T+ + LD G+ S+ + DG+ R++P++PD Sbjct: 47 TLFQFLDYGDWLSIKVRNDGKIRLTPEIPD 76
>GSH2_MOUSE (P31316) Homeobox protein GSH-2| Length = 305 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -2 Query: 369 GDAGGLPAVEPARHRHAPPQVCHH 298 GDA P V A H H PPQ HH Sbjct: 114 GDAQFCPRVSHAHHHHHPPQHHHH 137
>GSH2_HUMAN (Q9BZM3) Homeobox protein GSH-2| Length = 304 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -2 Query: 369 GDAGGLPAVEPARHRHAPPQVCHH 298 GDA P V A H H PPQ HH Sbjct: 114 GDAQFCPRVNHAHHHHHPPQHHHH 137
>CI123_HUMAN (Q96GE9) Protein C9orf123| Length = 116 Score = 29.6 bits (65), Expect = 3.6 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -3 Query: 395 IRALPSTAMATLVVSPPSSPRAIVM-LRHRCATT--HCRVLQGLG 270 I A P TA A +PP++P A HR T CRVL GLG Sbjct: 13 ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLG 57
>NEUR1_RAT (Q99PW3) Sialidase-1 precursor (EC 3.2.1.18) (Lysosomal sialidase)| (N-acetyl-alpha-neuraminidase 1) Length = 409 Score = 29.3 bits (64), Expect = 4.7 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +2 Query: 338 GSTAGRPPASPSPWTGERG 394 G+ RPP PS WTG RG Sbjct: 3 GAEPSRPPGPPSYWTGRRG 21
>ORC1_MOUSE (Q9Z1N2) Origin recognition complex subunit 1| Length = 840 Score = 29.3 bits (64), Expect = 4.7 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = +1 Query: 97 REPLHVEYEHRGVEFKPYEKAHDVVCGADGD-----EDEVVVNKVHFSREFISKLKAQAS 261 +EP+ HR ++ +C DGD E+E V ++ EFIS L + S Sbjct: 364 KEPIRTSRVHRKSSLLTLKRIRQQLCLLDGDDRDQEEEESVDSESEEEDEFISSLPTRNS 423 Query: 262 AGAPRPCST 288 G R T Sbjct: 424 LGQSRTRQT 432
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 399 AHPRSPVHGDGDAGGLPAVEPARHRHAPPQ 310 A P P+H + G P V +++RHA PQ Sbjct: 2966 AIPLPPMHSGSEPGARPEVRLSQYRHAGPQ 2995
>SYE_PYRKO (Q5JH16) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 573 Score = 28.5 bits (62), Expect = 8.1 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = +1 Query: 7 REFFVAWSQATRGAAIDPVPVH-DRASFFHPREPLHVEYEHRGVEFKPYEKAHDVVCGAD 183 R FFVA DP+P++ + A F PLH +Y RGV +E V D Sbjct: 412 RYFFVA----------DPIPMYVEGAQEFTAEIPLHPDYPERGVRRLKFEPDKPVYVSKD 461 Query: 184 GDE 192 E Sbjct: 462 DME 464
>POLG_RHDVS (Q86117) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Frame = +1 Query: 73 DRASFFHPREPLHVEYEHRGVEFKPYEKAHDVVCG-ADGDEDEVVVNKVHFSREFISKLK 249 +R +F +P +Y+ + +K Y + V A D++ N+VH SR K++ Sbjct: 721 NRFNFVYP----DAQYDQALLMWKQYFVMYGCVARLAKNFVDDIPYNQVHISRASDPKIE 776 Query: 250 AQASAGAPRPCSTLQCVVAHLWR 318 C QC HLWR Sbjct: 777 G---------CVEYQCKFQHLWR 790
>POLG_RHDVB (Q89273) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Frame = +1 Query: 73 DRASFFHPREPLHVEYEHRGVEFKPYEKAHDVVCG-ADGDEDEVVVNKVHFSREFISKLK 249 +R +F +P +Y+ + +K Y + V A D++ N+VH SR K++ Sbjct: 721 NRFNFVYP----DAQYDQALLMWKQYFVMYGCVARLAKNFVDDIPYNQVHISRASDPKIE 776 Query: 250 AQASAGAPRPCSTLQCVVAHLWR 318 C QC HLWR Sbjct: 777 G---------CVEYQCKFQHLWR 790
>POLG_RHDVA (Q86119) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Frame = +1 Query: 73 DRASFFHPREPLHVEYEHRGVEFKPYEKAHDVVCG-ADGDEDEVVVNKVHFSREFISKLK 249 +R +F +P +Y+ + +K Y + V A D++ N+VH SR K++ Sbjct: 721 NRFNFVYP----DAQYDQALLMWKQYFVMYGCVARLAKNFVDDIPYNQVHISRASDPKIE 776 Query: 250 AQASAGAPRPCSTLQCVVAHLWR 318 C QC HLWR Sbjct: 777 G---------CVEYQCKFQHLWR 790
>UNC5A_RAT (O08721) Netrin receptor UNC5A precursor (Unc-5 homolog A) (Unc-5| homolog 1) Length = 898 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%) Frame = -3 Query: 119 YSTCSGS--RGWKKEARSCT 66 +S CS S RGW+K +RSCT Sbjct: 251 WSVCSASCGRGWQKRSRSCT 270
>UNC5A_MOUSE (Q8K1S4) Netrin receptor UNC5A precursor (Unc-5 homolog A) (Unc-5| homolog 1) Length = 898 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 2/20 (10%) Frame = -3 Query: 119 YSTCSGS--RGWKKEARSCT 66 +S CS S RGW+K +RSCT Sbjct: 251 WSVCSASCGRGWQKRSRSCT 270
>CHS1_TUBUN (P55003) Chitin synthase 1 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 1) (Fragment) Length = 189 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +1 Query: 301 VAHLW-RSMTMARGLDGGETTSVAIAVDGRARMSPQVPDGY 420 +AH RS + G DG + V I DGR ++ P+V D + Sbjct: 15 IAHFCSRSKSRVWGKDGWQKIVVCIVADGRKKVHPRVLDAF 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,890,096 Number of Sequences: 219361 Number of extensions: 926098 Number of successful extensions: 3395 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3283 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3391 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
