ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet08e03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476949.1| Oryza sativa (japonica cultivar-group), mRNA Length = 869 Score = 270 bits (136), Expect = 3e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 163 cccccgaccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgacc 222 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 113 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 172 Query: 223 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggccgtaac 282 | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || ||| Sbjct: 173 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 232 Query: 283 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 342 || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 233 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 292 Query: 343 ggcacctcctacatcttcgactccgcgtcctgccgcacca 382 |||||||||||| ||||| || || | ||||||||||||| Sbjct: 293 ggcacctcctacttcttcaacgccacctcctgccgcacca 332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 270 bits (136), Expect = 3e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 163 cccccgaccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgacc 222 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 4805322 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 4805381 Query: 223 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggccgtaac 282 | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || ||| Sbjct: 4805382 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 4805441 Query: 283 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 342 || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4805442 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 4805501 Query: 343 ggcacctcctacatcttcgactccgcgtcctgccgcacca 382 |||||||||||| ||||| || || | ||||||||||||| Sbjct: 4805502 ggcacctcctacttcttcaacgccacctcctgccgcacca 4805541 Score = 170 bits (86), Expect = 2e-39 Identities = 186/218 (85%), Gaps = 6/218 (2%) Strand = Plus / Minus Query: 170 ccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgaccgaga--- 226 ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| Sbjct: 4808603 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 4808544 Query: 227 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggccgtaacc 283 |||||||| | |||||| | | ||||||||||||||||||||| | || || |||| Sbjct: 4808543 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 4808484 Query: 284 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 343 | |||||| || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 4808483 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 4808424 Query: 344 gcacctcctacatcttcgactccgcgtcctgccgcacc 381 ||||||||||| |||||||||||| |||||||||||| Sbjct: 4808423 gcacctcctactacttcgactccgcctcctgccgcacc 4808386 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 312 cgacccgacctacgacgtggagtggaccaacggcacctcctacatcttcgactccgcgtc 371 ||||||| ||||||||| |||||| |||||||||| ||| | |||||||||| || Sbjct: 17082840 cgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctc 17082899 Query: 372 ctgccgcacc 381 |||||||||| Sbjct: 17082900 ctgccgcacc 17082909
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 270 bits (136), Expect = 3e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 163 cccccgaccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgacc 222 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 123232 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 123291 Query: 223 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggccgtaac 282 | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || ||| Sbjct: 123292 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 123351 Query: 283 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 342 || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123352 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 123411 Query: 343 ggcacctcctacatcttcgactccgcgtcctgccgcacca 382 |||||||||||| ||||| || || | ||||||||||||| Sbjct: 123412 ggcacctcctacttcttcaacgccacctcctgccgcacca 123451 Score = 170 bits (86), Expect = 2e-39 Identities = 186/218 (85%), Gaps = 6/218 (2%) Strand = Plus / Minus Query: 170 ccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgaccgaga--- 226 ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| Sbjct: 126513 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 126454 Query: 227 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggccgtaacc 283 |||||||| | |||||| | | ||||||||||||||||||||| | || || |||| Sbjct: 126453 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 126394 Query: 284 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 343 | |||||| || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 126393 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 126334 Query: 344 gcacctcctacatcttcgactccgcgtcctgccgcacc 381 ||||||||||| |||||||||||| |||||||||||| Sbjct: 126333 gcacctcctactacttcgactccgcctcctgccgcacc 126296
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002L09 Length = 146343 Score = 270 bits (136), Expect = 3e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 163 cccccgaccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgacc 222 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 79835 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 79894 Query: 223 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggccgtaac 282 | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || ||| Sbjct: 79895 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 79954 Query: 283 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 342 || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79955 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 80014 Query: 343 ggcacctcctacatcttcgactccgcgtcctgccgcacca 382 |||||||||||| ||||| || || | ||||||||||||| Sbjct: 80015 ggcacctcctacttcttcaacgccacctcctgccgcacca 80054 Score = 170 bits (86), Expect = 2e-39 Identities = 186/218 (85%), Gaps = 6/218 (2%) Strand = Plus / Minus Query: 170 ccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgaccgaga--- 226 ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| Sbjct: 83116 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 83057 Query: 227 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggccgtaacc 283 |||||||| | |||||| | | ||||||||||||||||||||| | || || |||| Sbjct: 83056 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 82997 Query: 284 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 343 | |||||| || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 82996 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 82937 Query: 344 gcacctcctacatcttcgactccgcgtcctgccgcacc 381 ||||||||||| |||||||||||| |||||||||||| Sbjct: 82936 gcacctcctactacttcgactccgcctcctgccgcacc 82899
>dbj|AK099833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C07, full insert sequence Length = 869 Score = 270 bits (136), Expect = 3e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 163 cccccgaccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgacc 222 |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct: 113 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 172 Query: 223 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggccgtaac 282 | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || ||| Sbjct: 173 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 232 Query: 283 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 342 || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 233 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 292 Query: 343 ggcacctcctacatcttcgactccgcgtcctgccgcacca 382 |||||||||||| ||||| || || | ||||||||||||| Sbjct: 293 ggcacctcctacttcttcaacgccacctcctgccgcacca 332
>gb|AY105419.1| Zea mays PCO110580 mRNA sequence Length = 1045 Score = 262 bits (132), Expect = 7e-67 Identities = 192/212 (90%) Strand = Plus / Plus Query: 172 ccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgaccgagagcggc 231 ||||||||||||||||||||||||||||||||| | |||||||| || |||||||||||| Sbjct: 192 ccgacgccgtggccggagcagttccacgcggtggtcttcaccaatctcaccgagagcggc 251 Query: 232 ggccgcctgcagctcatcgacctctactacgactggccccgcggccgtaacctgaacctc 291 ||||| |||||||| |||||||| ||||||||||||||| | ||||| ||||| |||||| Sbjct: 252 ggccggctgcagctgatcgacctgtactacgactggcccaggggccgcaacctcaacctc 311 Query: 292 atccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacggcacctcc 351 ||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||| Sbjct: 312 atccgggaccagctctccagcgacccgctctacgacgtcgagtggaccaacggcacctcc 371 Query: 352 tacatcttcgactccgcgtcctgccgcaccat 383 ||| |||||||||||| ||||||||||||||| Sbjct: 372 tacttcttcgactccgggtcctgccgcaccat 403
>ref|XM_476950.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1279 Score = 170 bits (86), Expect = 2e-39 Identities = 186/218 (85%), Gaps = 6/218 (2%) Strand = Plus / Plus Query: 170 ccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgaccgaga--- 226 ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| Sbjct: 162 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 221 Query: 227 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggccgtaacc 283 |||||||| | |||||| | | ||||||||||||||||||||| | || || |||| Sbjct: 222 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 281 Query: 284 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 343 | |||||| || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 282 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 341 Query: 344 gcacctcctacatcttcgactccgcgtcctgccgcacc 381 ||||||||||| |||||||||||| |||||||||||| Sbjct: 342 gcacctcctactacttcgactccgcctcctgccgcacc 379
>dbj|AK071758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112J01, full insert sequence Length = 1279 Score = 170 bits (86), Expect = 2e-39 Identities = 186/218 (85%), Gaps = 6/218 (2%) Strand = Plus / Plus Query: 170 ccccgacgccgtggccggagcagttccacgcggtgatgttcaccaacctgaccgaga--- 226 ||||||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| Sbjct: 162 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 221 Query: 227 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggccgtaacc 283 |||||||| | |||||| | | ||||||||||||||||||||| | || || |||| Sbjct: 222 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 281 Query: 284 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 343 | |||||| || | |||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 282 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 341 Query: 344 gcacctcctacatcttcgactccgcgtcctgccgcacc 381 ||||||||||| |||||||||||| |||||||||||| Sbjct: 342 gcacctcctactacttcgactccgcctcctgccgcacc 379
>ref|NM_113280.2| Arabidopsis thaliana unknown protein AT3G23760 mRNA, complete cds Length = 751 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 tggccggagcagttccacgcggtgatgtt 209 ||||||||||||||||||||| ||||||| Sbjct: 142 tggccggagcagttccacgcgttgatgtt 170
>gb|BT008631.1| Arabidopsis thaliana clone RAFL17-06-O10 (R50345) At3g23760 mRNA, partial sequence Length = 732 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 tggccggagcagttccacgcggtgatgtt 209 ||||||||||||||||||||| ||||||| Sbjct: 109 tggccggagcagttccacgcgttgatgtt 137
>emb|BX825796.1|CNS0A7QH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 726 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 tggccggagcagttccacgcggtgatgtt 209 ||||||||||||||||||||| ||||||| Sbjct: 132 tggccggagcagttccacgcgttgatgtt 160
>gb|AY088284.1| Arabidopsis thaliana clone 5176 mRNA, complete sequence Length = 751 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 181 tggccggagcagttccacgcggtgatgtt 209 ||||||||||||||||||||| ||||||| Sbjct: 142 tggccggagcagttccacgcgttgatgtt 170
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 181 tggccggagcagttccacgcggtgatgtt 209 ||||||||||||||||||||| ||||||| Sbjct: 38551 tggccggagcagttccacgcgttgatgtt 38523
>ref|XM_479662.1| Oryza sativa (japonica cultivar-group), mRNA Length = 635 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctcatcgacctctactacgactggcc 269 ||||||| || |||||||| ||||| |||||||||||||||| Sbjct: 179 gcggcgggcggctgcagctaatcgagatctactacgactggcc 221 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 gtggccggagcagttccacgcggtg 204 ||||||||||| ||||||||||||| Sbjct: 120 gtggccggagcggttccacgcggtg 144
>ref|XM_426173.1| PREDICTED: Gallus gallus similar to RIKEN cDNA A330019N05 gene (LOC428616), mRNA Length = 2724 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgc 79 ||||||||||||||||||||||| Sbjct: 1315 cctcttcctcctcctgctgccgc 1293
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctcatcgacctctactacgactggcc 269 ||||||| || |||||||| ||||| |||||||||||||||| Sbjct: 153030 gcggcgggcggctgcagctaatcgagatctactacgactggcc 153072 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 gtggccggagcagttccacgcggtg 204 ||||||||||| ||||||||||||| Sbjct: 152971 gtggccggagcggttccacgcggtg 152995
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctcatcgacctctactacgactggcc 269 ||||||| || |||||||| ||||| |||||||||||||||| Sbjct: 68365 gcggcgggcggctgcagctaatcgagatctactacgactggcc 68407 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 gtggccggagcagttccacgcggtg 204 ||||||||||| ||||||||||||| Sbjct: 68306 gtggccggagcggttccacgcggtg 68330
>dbj|AK120363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068G21, full insert sequence Length = 635 Score = 46.1 bits (23), Expect = 0.083 Identities = 38/43 (88%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctcatcgacctctactacgactggcc 269 ||||||| || |||||||| ||||| |||||||||||||||| Sbjct: 179 gcggcgggcggctgcagctaatcgagatctactacgactggcc 221 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 gtggccggagcagttccacgcggtg 204 ||||||||||| ||||||||||||| Sbjct: 120 gtggccggagcggttccacgcggtg 144
>emb|AL136140.10| Human DNA sequence from clone RP3-449H6 on chromosome 6p12.3-21.2 Contains a novel gene, complete sequence Length = 84613 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 ctcttcctcctcctgctgccgc 79 |||||||||||||||||||||| Sbjct: 61529 ctcttcctcctcctgctgccgc 61508
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 gccgtccctcttcctcctcctgctgc 76 |||||||||| ||||||||||||||| Sbjct: 21270990 gccgtccctcctcctcctcctgctgc 21270965
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 312 cgacccgacctacgacgtggagtggaccaacggcacctcctacatcttcgactccgcgtc 371 ||||||| ||||||||| |||||| |||||||||| ||| | |||||||||| || Sbjct: 35966 cgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctc 36025 Query: 372 ctgccgcacc 381 |||||||||| Sbjct: 36026 ctgccgcacc 36035
>emb|AJ272599.1|LSP272599 Lyngbya sp. MPI-FGP-A partial 16S rRNA gene Length = 552 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 taatcccggataagccgcaagg 35 |||||||||||||||||||||| Sbjct: 5 taatcccggataagccgcaagg 26
>dbj|AK068238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149J12, full insert sequence Length = 863 Score = 44.1 bits (22), Expect = 0.33 Identities = 58/70 (82%) Strand = Plus / Plus Query: 312 cgacccgacctacgacgtggagtggaccaacggcacctcctacatcttcgactccgcgtc 371 ||||||| ||||||||| |||||| |||||||||| ||| | |||||||||| || Sbjct: 254 cgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctc 313 Query: 372 ctgccgcacc 381 |||||||||| Sbjct: 314 ctgccgcacc 323
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 gccgtccctcttcctcctcctgctgc 76 |||||||||| ||||||||||||||| Sbjct: 21197199 gccgtccctcctcctcctcctgctgc 21197174
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 gccgtccctcttcctcctcctgctgc 76 |||||||||| ||||||||||||||| Sbjct: 19210 gccgtccctcctcctcctcctgctgc 19235
>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 95132 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 51 gccgtccctcttcctcctcctgctgc 76 |||||||||| ||||||||||||||| Sbjct: 90288 gccgtccctcctcctcctcctgctgc 90313
>ref|NM_193207.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2484 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 tcctcgccgtggcggccgaggccgt 104 ||||||||||||||||||| ||||| Sbjct: 53 tcctcgccgtggcggccgatgccgt 77
>ref|XM_515469.1| PREDICTED: Pan troglodytes LOC459225 (LOC459225), mRNA Length = 986 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 254 gcggcggccgcctgcagctca 274
>ref|NM_004801.2| Homo sapiens neurexin 1 (NRXN1), transcript variant alpha, mRNA Length = 6202 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 446 gcggcggccgcctgcagctca 466
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 cgccgccgtccctcttcctcc 67 ||||||||||||||||||||| Sbjct: 281479 cgccgccgtccctcttcctcc 281499 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 cgccgccgtccctcttcctcc 67 ||||||||||||||||||||| Sbjct: 271966 cgccgccgtccctcttcctcc 271986
>gb|BC079893.1| Mus musculus neurexin I, mRNA (cDNA clone IMAGE:30544573) Length = 5697 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1268 gcggcggccgcctgcagctca 1288
>ref|XM_959039.1| Neurospora crassa OR74A hypothetical protein (NCU02842.1) partial mRNA Length = 2013 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctgccgctcctc 84 ||||| ||||||||||||||| ||||||| Sbjct: 1995 ccctcctcctcctcctgctgctgctcctc 1967
>ref|XM_330029.1| Neurospora crassa OR74A hypothetical protein (NCU02842.1) partial mRNA Length = 2013 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctgccgctcctc 84 ||||| ||||||||||||||| ||||||| Sbjct: 1995 ccctcctcctcctcctgctgctgctcctc 1967
>gb|BC046631.1| Homo sapiens neurexin 1, mRNA (cDNA clone IMAGE:4815048), complete cds Length = 5169 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1317 gcggcggccgcctgcagctca 1337
>gb|AC140240.2| Mus musculus BAC clone RP24-281M12 from chromosome 18, complete sequence Length = 166476 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 tcttcctcctcctgctgccgctcct 83 |||||||||||||||||| |||||| Sbjct: 11955 tcttcctcctcctgctgctgctcct 11979
>ref|XM_849687.1| PREDICTED: Canis familiaris similar to testis specific, 10 interacting protein (LOC611966), mRNA Length = 1923 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcc 82 ||||||||||||||||||||| Sbjct: 1442 tcctcctcctgctgccgctcc 1422
>ref|XM_847010.1| PREDICTED: Canis familiaris similar to neurexin 1 isoform alpha precursor, transcript variant 2 (LOC474589), mRNA Length = 5663 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 254 gcggcggccgcctgcagctca 274
>ref|XM_859895.1| PREDICTED: Canis familiaris similar to neurexin 1 isoform alpha precursor, transcript variant 5 (LOC474589), mRNA Length = 5615 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 254 gcggcggccgcctgcagctca 274
>ref|XM_531818.2| PREDICTED: Canis familiaris similar to neurexin 1 isoform alpha precursor, transcript variant 1 (LOC474589), mRNA Length = 5504 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 254 gcggcggccgcctgcagctca 274
>gb|AC127229.3| Mus musculus BAC clone RP24-553F13 from chromosome 18, complete sequence Length = 166995 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 tcttcctcctcctgctgccgctcct 83 |||||||||||||||||| |||||| Sbjct: 47518 tcttcctcctcctgctgctgctcct 47494
>emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone B10D6 Length = 89019 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 ccctcttcctcctcctgctgccgctcctc 84 ||||| ||||||||||||||| ||||||| Sbjct: 76120 ccctcctcctcctcctgctgctgctcctc 76148
>dbj|AK124726.1| Homo sapiens cDNA FLJ42736 fis, clone BRAWH2015866, highly similar to Homo sapiens mRNA for neurexin I-alpha protein Length = 2543 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1731 gcggcggccgcctgcagctca 1751
>dbj|AK137407.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630047F03 product:neurexin I, full insert sequence Length = 4821 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1344 gcggcggccgcctgcagctca 1364
>dbj|AK133271.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932428E23 product:neurexin I, full insert sequence Length = 3308 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 12 gcggcggccgcctgcagctca 32
>dbj|AK139280.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730090O12 product:Neurexin 1-alpha precursor (Neurexin I-alpha) homolog [Rattus norvegicus], full insert sequence Length = 4300 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1285 gcggcggccgcctgcagctca 1305
>dbj|AK163484.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230220E16 product:neurexin I, full insert sequence Length = 3102 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1307 gcggcggccgcctgcagctca 1327
>gb|AF424835.1|AF424835 Macaca mulatta neurexin 1 alpha mRNA, partial cds Length = 448 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 68 gcggcggccgcctgcagctca 88
>dbj|AK037724.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130041O12 product:NEUREXIN 1-ALPHA PRECURSOR (NEUREXIN I-ALPHA) homolog [Rattus norvegicus], full insert sequence Length = 3038 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1328 gcggcggccgcctgcagctca 1348
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 tcctcgccgtggcggccgaggccgt 104 ||||||||||||||||||| ||||| Sbjct: 19298090 tcctcgccgtggcggccgatgccgt 19298066 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gcggcagcaggcggcggtgc 161 |||||||||||||||||||| Sbjct: 23446599 gcggcagcaggcggcggtgc 23446618 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cttcctcctcctgctgccgc 79 |||||||||||||||||||| Sbjct: 2866114 cttcctcctcctgctgccgc 2866095
>gb|AC007682.3| Homo sapiens BAC clone RP11-391D19 from 2, complete sequence Length = 189968 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 158961 gcggcggccgcctgcagctca 158941
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 tcctcgccgtggcggccgaggccgt 104 ||||||||||||||||||| ||||| Sbjct: 117711 tcctcgccgtggcggccgatgccgt 117687
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 tcctcgccgtggcggccgaggccgt 104 ||||||||||||||||||| ||||| Sbjct: 26095 tcctcgccgtggcggccgatgccgt 26071
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 ccgaccccgacgccgtggccg 186 ||||||||||||||||||||| Sbjct: 3039383 ccgaccccgacgccgtggccg 3039363
>dbj|AK119447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-D03, full insert sequence Length = 2864 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 tcctcgccgtggcggccgaggccgt 104 ||||||||||||||||||| ||||| Sbjct: 159 tcctcgccgtggcggccgatgccgt 183
>dbj|AB093249.2| Mus musculus mRNA for mKIAA0578 protein Length = 5783 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 1337 gcggcggccgcctgcagctca 1357
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 agcggcggccgcctgcagctc 246 ||||||||||||||||||||| Sbjct: 1768257 agcggcggccgcctgcagctc 1768277
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 303 gctctccggcgacccgacctacgacgtgg 331 ||||||||||||||||| ||||| ||||| Sbjct: 312293 gctctccggcgacccgagctacggcgtgg 312265
>gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome 17, complete sequence Length = 178835 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 14398 gcggcggccgcctgcagctca 14418
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 ccctcttcctcctcctgctgc 76 ||||||||||||||||||||| Sbjct: 122765 ccctcttcctcctcctgctgc 122785
>gb|AY101393.1| Oryctolagus cuniculus toll-like receptor 2 mRNA, complete cds Length = 3271 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 63 cctcctcctgctgccgctcctcgccgtgg 91 ||||||||||||| |||| |||||||||| Sbjct: 1845 cctcctcctgctgacgctgctcgccgtgg 1873
>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence Length = 211272 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 88793 gcggcggccgcctgcagctca 88773
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cttcctcctcctgctgccgct 80 ||||||||||||||||||||| Sbjct: 83123 cttcctcctcctgctgccgct 83143
>dbj|AB035356.1| Homo sapiens mRNA for neurexin I-alpha protein, complete cds Length = 6206 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 446 gcggcggccgcctgcagctca 466
>dbj|AB011150.2| Homo sapiens mRNA for KIAA0578 protein, partial cds Length = 8114 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gcggcggccgcctgcagctca 247 ||||||||||||||||||||| Sbjct: 437 gcggcggccgcctgcagctca 457
>ref|NM_021655.1| Rattus norvegicus chromogranin A (Chga), mRNA Length = 1733 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1043 cctcttcctcctcctgctgc 1024
>gb|BC087703.1| Rattus norvegicus chromogranin A, mRNA (cDNA clone MGC:105435 IMAGE:7313842), complete cds Length = 1885 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1170 cctcttcctcctcctgctgc 1151
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| | ||||||| Sbjct: 179480 cctcttcctcctcctgctcctgctcctc 179507
>ref|NM_184408.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2730 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cttcctcctcctgctgccgc 79 |||||||||||||||||||| Sbjct: 228 cttcctcctcctgctgccgc 247
>ref|XM_523218.1| PREDICTED: Pan troglodytes similar to FLJ32855 protein (LOC467823), mRNA Length = 2793 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 1871 ccctcttcctcctcctgctg 1852
>gb|AC169501.2| Mus musculus BAC clone RP24-445O18 from chromosome 17, complete sequence Length = 202078 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ccgtccctcttcctcctcct 71 |||||||||||||||||||| Sbjct: 38228 ccgtccctcttcctcctcct 38247
>ref|NM_196706.1| Oryza sativa (japonica cultivar-group) putative selenium-binding protein (OSJNBa0046P18.15), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 142 tccctcttcctcctcctgct 161
>ref|XM_470414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 166 ccgaccccgacgccgtggccggagcagttccacgcg 201 ||||| |||||||| ||||||| |||||||||||| Sbjct: 79 ccgacgccgacgccatggccggcccagttccacgcg 114
>gb|AY433577.1| Aedes aegypti ASAP ID: 43207 conserved unknown mRNA sequence Length = 725 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 78 cctcttcctcctcctgctgc 59
>gb|AY751744.1| Danio rerio nicastrin (ncstn) mRNA, complete cds Length = 2497 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcaccaacctgaccgagagc 228 |||||||||||||||||||| Sbjct: 1782 tcaccaacctgaccgagagc 1801
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gaccgagagcggcggccgcc 238 |||||||||||||||||||| Sbjct: 313872 gaccgagagcggcggccgcc 313853
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 gctcctcgccgtggcggccgaggc 101 ||||||||||| |||||||||||| Sbjct: 699081 gctcctcgccgaggcggccgaggc 699104
>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence Length = 120487 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| | ||||||| Sbjct: 27153 cctcttcctcctcctgctactgctcctc 27180 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| | ||||||| Sbjct: 26797 cctcttcctcctcctgctcctgctcctc 26824
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 gctcccccgaccccgacgccgtgg 183 |||||||||||||||||| ||||| Sbjct: 2121066 gctcccccgaccccgacgacgtgg 2121043
>ref|XM_877370.1| PREDICTED: Bos taurus similar to RAB3A interacting protein (rabin3)-like 1, transcript variant 5 (LOC614335), mRNA Length = 2247 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ctccgcgtcctgccgcacca 382 |||||||||||||||||||| Sbjct: 1278 ctccgcgtcctgccgcacca 1259
>ref|XM_877322.1| PREDICTED: Bos taurus similar to RAB3A interacting protein (rabin3)-like 1, transcript variant 4 (LOC614335), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ctccgcgtcctgccgcacca 382 |||||||||||||||||||| Sbjct: 1035 ctccgcgtcctgccgcacca 1016
>ref|XM_865886.1| PREDICTED: Bos taurus similar to RAB3A interacting protein (rabin3)-like 1, transcript variant 2 (LOC614335), mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ctccgcgtcctgccgcacca 382 |||||||||||||||||||| Sbjct: 1254 ctccgcgtcctgccgcacca 1235
>ref|XM_414722.1| PREDICTED: Gallus gallus similar to mKIAA1924 protein (LOC416407), mRNA Length = 9330 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 tcctcctcctgctgccgctcctcg 85 |||||||||| ||||||||||||| Sbjct: 334 tcctcctcctcctgccgctcctcg 357
>ref|XM_414251.1| PREDICTED: Gallus gallus similar to Microsomal signal peptidase 12 kDa subunit (SPase 12 kDa subunit) (SPC12) (HSPC033) (LOC415899), mRNA Length = 772 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| ||| ||||| Sbjct: 214 cctcttcctcctcctgctcccgttcctc 187
>ref|XM_956911.1| Neurospora crassa OR74A hypothetical protein (NCU05240.1) partial mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||| ||||||||||||||| ||||||| Sbjct: 95 cctcctcctcctcctgctgctgctcctc 68
>ref|XM_324596.1| Neurospora crassa OR74A hypothetical protein (NCU05240.1) partial mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||| ||||||||||||||| ||||||| Sbjct: 95 cctcctcctcctcctgctgctgctcctc 68
>ref|NM_008951.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (Psmd4), mRNA Length = 1252 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 723 ccgccgtgcctcttcctcctgccgctgccgct 692
>gb|BC105507.1| Bos taurus RAB3A interacting protein (rabin3)-like 1, mRNA (cDNA clone MGC:128938 IMAGE:8120520), complete cds Length = 2240 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ctccgcgtcctgccgcacca 382 |||||||||||||||||||| Sbjct: 1240 ctccgcgtcctgccgcacca 1221
>gb|AF419662.1| Uncultured bacterium a1b023 16S ribosomal RNA gene, partial sequence Length = 1523 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgcaaggaacaccaatggcg 48 |||||||||||||||||||| Sbjct: 746 cgcaaggaacaccaatggcg 765
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 166 ccgaccccgacgccgtggccggagcagttccacgcg 201 ||||| |||||||| ||||||| |||||||||||| Sbjct: 35515587 ccgacgccgacgccatggccggcccagttccacgcg 35515552
>gb|AY288950.1| Homo sapiens antigen MLAA-7 mRNA sequence Length = 1285 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 724 ccgccgtgcctcttcctcctgccgctgccgct 693
>gb|AF145445.1| Rattus norvegicus chromogranin A precursor (Chga) mRNA, complete cds Length = 1733 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1043 cctcttcctcctcctgctgc 1024
>gb|AF529686.1| HIV-1 isolate BR98006 from Brazil nef protein (nef) gene, complete cds Length = 639 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 214 cctcttcctcctcctgctgc 195
>gb|AY280635.1| Uncultured bacterium clone pbiow genomic region, partial sequence Length = 30796 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gaacaccaatggcgccgccg 54 |||||||||||||||||||| Sbjct: 6967 gaacaccaatggcgccgccg 6948
>ref|XM_838083.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0999) partial mRNA Length = 12525 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gaccgagagcggcggccgcc 238 |||||||||||||||||||| Sbjct: 1888 gaccgagagcggcggccgcc 1869
>ref|XM_540525.2| PREDICTED: Canis familiaris similar to CTD-binding SR-like protein rA9 (LOC483405), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gtccctcttcctcctcctgc 73 |||||||||||||||||||| Sbjct: 3258 gtccctcttcctcctcctgc 3239
>gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome 3, complete sequence Length = 148675 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 21225 ccgccgtgcctcttcctcctgccgctgccgct 21256
>gb|AC122286.4| Mus musculus BAC clone RP23-252F4 from chromosome 6, complete sequence Length = 178633 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gtccctcttcctcctcctgc 73 |||||||||||||||||||| Sbjct: 38266 gtccctcttcctcctcctgc 38247
>gb|BC016433.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 4, mRNA (cDNA clone IMAGE:4458659), with apparent retained intron Length = 2148 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 1438 ccgccgtgcctcttcctcctgccgctgccgct 1407
>gb|AC123053.4| Mus musculus BAC clone RP24-374O20 from chromosome 7, complete sequence Length = 184618 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 64527 tccctcttcctcctcctgct 64508
>ref|XM_811450.1| Trypanosoma cruzi strain CL Brener paraflagellar rod protein (Tc00.1047053508387.90) partial mRNA Length = 1770 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||| |||||||||||||| Sbjct: 1127 tcctcctcccgctgccgctcctcg 1104
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| | ||||||| Sbjct: 140760 cctcttcctcctcctgctactgctcctc 140787 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| | ||||||| Sbjct: 140404 cctcttcctcctcctgctcctgctcctc 140431
>ref|XM_812183.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509767.150) partial mRNA Length = 1470 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttcctcctcctgctgccgct 80 |||||||||||||||||||| Sbjct: 921 ttcctcctcctgctgccgct 902
>emb|CR394540.10| Zebrafish DNA sequence from clone DKEYP-10E10 in linkage group 21, complete sequence Length = 159341 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 130075 tccctcttcctcctcctgct 130056
>ref|XM_814828.1| Trypanosoma cruzi strain CL Brener paraflagellar rod protein (Tc00.1047053506789.210) partial mRNA Length = 2010 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||| |||||||||||||| Sbjct: 1367 tcctcctcccgctgccgctcctcg 1344
>ref|XM_802038.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510679.14) partial mRNA Length = 854 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgct 80 ||||||||||||||| |||||||| Sbjct: 673 cctcttcctcctcctcctgccgct 650
>gb|AC131712.3| Mus musculus BAC clone RP23-193A5 from 17, complete sequence Length = 218758 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccgtccctcttcctcctcct 71 |||||||||||||||||||| Sbjct: 45523 ccgtccctcttcctcctcct 45504
>ref|XM_797622.1| Trypanosoma cruzi strain CL Brener pre-mRNA splicing factor ATP-dependent RNA helicase (Tc00.1047053422041.9) partial mRNA Length = 1052 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 412 cctcttcctcctcctgctgc 393
>gb|AC121972.2| Mus musculus BAC clone RP24-276H18 from 2, complete sequence Length = 193641 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 77345 cctcttcctcctcctgctgc 77326
>emb|CR703941.2|CNS0G641 Tetraodon nigroviridis full-length cDNA Length = 1320 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 973 cctcttcctcctcctgctgc 954
>gb|BC009005.1| Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 4, mRNA (cDNA clone MGC:6683 IMAGE:3581937), complete cds Length = 1301 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 741 ccgccgtgcctcttcctcctgccgctgccgct 710
>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence Length = 236182 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 ttcctcctcctgctgccgctcctc 84 ||||||||||||||||| |||||| Sbjct: 120582 ttcctcctcctgctgcctctcctc 120559
>ref|NM_031520.1| Rattus norvegicus myosin, heavy polypeptide 10, non-muscle (Myh10), mRNA Length = 7648 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 4257 cctcttcctcctcctgctgc 4238
>gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 map 3, complete sequence Length = 224451 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 195395 ccgccgtgcctcttcctcctgccgctgccgct 195426
>emb|Z82214.23|HS526I14 Human DNA sequence from clone RP3-526I14 on chromosome 22, complete sequence Length = 129389 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 52054 tccctcttcctcctcctgct 52073
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgct 80 ||||||||||||||||| |||||| Sbjct: 50881 cctcttcctcctcctgcggccgct 50858
>emb|AL121761.5|HSJ122P22 Human DNA sequence from clone RP1-122P22 on chromosome 20 Contains the 3' end the SLC24A3 gene for solute carrier family 24 (sodium/potassium/calcium exchanger) member 3, a novel gene and a CpG island, complete sequence Length = 118990 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 gtccctcttcctcctcctgctgcc 77 ||||||||||| |||||||||||| Sbjct: 66997 gtccctcttccacctcctgctgcc 67020
>emb|AL954384.11| Zebrafish DNA sequence from clone CH211-146L13 in linkage group 6, complete sequence Length = 162560 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 86797 cctcttcctcctcctgctgc 86778
>emb|X59084.1|ZMGLB1SG Zea mays Glb1-S gene for vicilin-like embryo storage protein Length = 3546 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||||||| |||||||||| Sbjct: 2375 tcctcctcctgctcccgctcctcg 2352
>emb|X59083.1|ZMGLB1LG Zea mays Glb1-L gene for vicilin-like embryo storage protein Length = 3583 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||||||| |||||||||| Sbjct: 2376 tcctcctcctgctcccgctcctcg 2353
>emb|X06832.1|RNCHROMA Rat mRNA for prechromogranin A Length = 1871 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1178 cctcttcctcctcctgctgc 1159
>gb|DQ115865.1| Cyanobacteria phage AS-1 contig_58 genomic sequence Length = 984 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cggcggccgcctgcagctca 247 |||||||||||||||||||| Sbjct: 164 cggcggccgcctgcagctca 145
>gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155235 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| | ||||||| Sbjct: 76774 cctcttcctcctcctgctcctgctcctc 76801
>emb|AL662846.18| Mouse DNA sequence from clone RP23-399N2 on chromosome 11 Contains a zinc finger protein of the cerebellum 5 (Zic5) pseudogene, complete sequence Length = 189287 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 124075 cctcttcctcctcctgctgc 124056 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 124024 cctcttcctcctcctgctgc 124005
>gb|AY753716.1| Trypanosoma cruzi paraflagellar rod protein PFR6-1 mRNA, complete cds Length = 2097 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||| |||||||||||||| Sbjct: 1454 tcctcctcccgctgccgctcctcg 1431
>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence Length = 81252 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gtccctcttcctcctcctgc 73 |||||||||||||||||||| Sbjct: 25003 gtccctcttcctcctcctgc 24984
>emb|X59085.1|ZMGLB10 Zea mays Glb1-0 gene for vicilin-like storage protein (truncated) Length = 3604 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||||||| |||||||||| Sbjct: 2378 tcctcctcctgctcccgctcctcg 2355
>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown, complete sequence Length = 188107 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 30833 cctcttcctcctcctgctgc 30852
>gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 69404 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 49678 cctcttcctcctcctgctgc 49659
>dbj|AB196104.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:TB003-95 Length = 563 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgcaaggaacaccaatggcg 48 |||||||||||||||||||| Sbjct: 344 cgcaaggaacaccaatggcg 363
>dbj|AB196103.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:TB003-71 Length = 560 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgcaaggaacaccaatggcg 48 |||||||||||||||||||| Sbjct: 342 cgcaaggaacaccaatggcg 361
>dbj|AK057417.1| Homo sapiens cDNA FLJ32855 fis, clone TESTI2003512, weakly similar to SYNAPTONEMAL COMPLEX PROTEIN 1 Length = 2672 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 1741 ccctcttcctcctcctgctg 1722
>dbj|AK056490.1| Homo sapiens cDNA FLJ31928 fis, clone NT2RP7005520, weakly similar to INTEGUMENTARY MUCIN A.1 PRECURSOR Length = 3254 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 2934 tccctcttcctcctcctgct 2915
>gb|AC161237.8| Mus musculus chromosome 3, clone RP23-307M9, complete sequence Length = 206004 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 77950 tccctcttcctcctcctgct 77931
>dbj|AK055463.1| Homo sapiens cDNA FLJ30901 fis, clone FEBRA2005778, weakly similar to INTEGUMENTARY MUCIN A.1 PRECURSOR Length = 2016 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 1696 tccctcttcctcctcctgct 1677
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 217 ctgaccgagagcggcggccgcctgcagctcat 248 |||||||| |||||||| ||||||||||||| Sbjct: 1364451 ctgaccgacggcggcggcggcctgcagctcat 1364420
>dbj|AK145524.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0010E10 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 4, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 731 ccgccgtgcctcttcctcctgccgctgccgct 700
>ref|XM_704561.1| PREDICTED: Danio rerio similar to AKT1 substrate 1 (proline-rich), transcript variant 3 (LOC566559), mRNA Length = 1284 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 649 cctcttcctcctcctgctgc 630
>ref|XM_704560.1| PREDICTED: Danio rerio similar to AKT1 substrate 1 (proline-rich), transcript variant 2 (LOC566559), mRNA Length = 2282 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1647 cctcttcctcctcctgctgc 1628
>ref|XM_687419.1| PREDICTED: Danio rerio similar to AKT1 substrate 1 (proline-rich), transcript variant 1 (LOC566559), mRNA Length = 2250 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1615 cctcttcctcctcctgctgc 1596
>emb|AJ748744.1| Haloferax volcanii hjc gene for holliday junction resolvase Length = 2000 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 ttcgactccgcgtcctgccgcacc 381 ||||| |||||||||||||||||| Sbjct: 387 ttcgaatccgcgtcctgccgcacc 410
>gb|AF323606.1|AF323606 Rhodococcus erythropolis picric acid degradation gene cluster, partial sequence Length = 12500 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgaccccgacgccgtggccg 186 |||||||||||||||||||| Sbjct: 5586 cgaccccgacgccgtggccg 5605
>dbj|AK010969.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510015L10 product:proteasome (prosome, macropain) 26S subunit, non-ATPase, 4, full insert sequence Length = 1250 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 721 ccgccgtgcctcttcctcctgccgctgccgct 690
>gb|U28017.1|ZMU28017 Zea mays truncated globulin1 (Glb1) gene, Glb1-Hb allele, complete cds Length = 3614 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||||||| |||||||||| Sbjct: 2368 tcctcctcctgctcccgctcctcg 2345
>gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 map 3, complete sequence Length = 206230 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 36235 ccgccgtgcctcttcctcctgccgctgccgct 36266
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 553236 tccctcttcctcctcctgct 553217
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttcctcctcctgctgccgct 80 |||||||||||||||||||| Sbjct: 1101768 ttcctcctcctgctgccgct 1101749
>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete sequence Length = 178972 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 116294 cctcttcctcctcctgctgc 116275
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 15404258 tccctcttcctcctcctgct 15404277
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgtccctcttcctcctcctgctgc 76 |||||||||||||| ||||||||| Sbjct: 21014760 cgtccctcttcctcttcctgctgc 21014737
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gtccctcttcctcctcctgc 73 |||||||||||||||||||| Sbjct: 23541 gtccctcttcctcctcctgc 23560
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 166 ccgaccccgacgccgtggccggagcagttccacgcg 201 ||||| |||||||| ||||||| |||||||||||| Sbjct: 35605659 ccgacgccgacgccatggccggcccagttccacgcg 35605624
>emb|BX088716.7| Zebrafish DNA sequence from clone CH211-196O18 in linkage group 21, complete sequence Length = 156079 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 15246 tccctcttcctcctcctgct 15227
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 121621 tccctcttcctcctcctgct 121640
>dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-284M8, complete sequence Length = 255195 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 166694 cctcttcctcctcctgctgc 166675
>gb|AC154738.2| Mus musculus BAC clone RP24-390D14 from chromosome 14, complete sequence Length = 197100 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 111322 tccctcttcctcctcctgct 111341
>gb|AF107563.1|MUSPEX1 Mus musculus Cast (Cast) and peroxisomal membrane anchor protein (Pex14) genes, partial sequence Length = 53094 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 28232 cctcttcctcctcctgctgc 28251
>ref|NM_001009556.1| Danio rerio nicastrin (ncstn), mRNA Length = 2497 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tcaccaacctgaccgagagc 228 |||||||||||||||||||| Sbjct: 1782 tcaccaacctgaccgagagc 1801
>gb|AF139055.1|AF139055 Rattus norvegicus nonmuscle myosin heavy chain-B mRNA, complete cds Length = 7648 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 4257 cctcttcctcctcctgctgc 4238
>emb|BX932880.1| Gallus gallus finished cDNA, clone ChEST276m2 Length = 655 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| ||| ||||| Sbjct: 95 cctcttcctcctcctgctcccgttcctc 68
>emb|BX933705.1| Gallus gallus finished cDNA, clone ChEST422f3 Length = 567 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| ||| ||||| Sbjct: 103 cctcttcctcctcctgctcccgttcctc 76
>emb|BX929433.1| Gallus gallus finished cDNA, clone ChEST989n11 Length = 664 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||||||||||||||||| ||| ||||| Sbjct: 103 cctcttcctcctcctgctcccgttcctc 76
>gb|AC090826.15| Homo sapiens chromosome 15, clone CTD-2311M21, complete sequence Length = 169518 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 67551 ccctcttcctcctcctgctg 67532
>gb|AC021087.5| Homo sapiens chromosome 5 clone CTD-2083E4, complete sequence Length = 156677 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ctcttcctcctcctgctgcc 77 |||||||||||||||||||| Sbjct: 62608 ctcttcctcctcctgctgcc 62627
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 166 ccgaccccgacgccgtggccggagcagttccacgcg 201 ||||| |||||||| ||||||| |||||||||||| Sbjct: 48550 ccgacgccgacgccatggccggcccagttccacgcg 48515
>gb|AF175574.1|AF175574 Mus musculus 26S proteasome subunit S5a mRNA, complete cds Length = 1152 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 723 ccgccgtgcctcttcctcctgccgctgccgct 692
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cccgcggcagcaggcggcgg 158 |||||||||||||||||||| Sbjct: 5386999 cccgcggcagcaggcggcgg 5387018
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0030H07 Length = 168253 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cttcctcctcctgctgccgc 79 |||||||||||||||||||| Sbjct: 73112 cttcctcctcctgctgccgc 73093
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gcggcagcaggcggcggtgc 161 |||||||||||||||||||| Sbjct: 9904 gcggcagcaggcggcggtgc 9923
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgtccctcttcctcctcctgctgc 76 |||||||||||||| ||||||||| Sbjct: 106849 cgtccctcttcctcttcctgctgc 106826
>emb|BX545905.9| Mouse DNA sequence from clone RP23-339J7 on chromosome 2, complete sequence Length = 128574 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 22678 cctcttcctcctcctgctgc 22659
>dbj|AK121550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A09, full insert sequence Length = 3695 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 184 tccctcttcctcctcctgct 203
>dbj|AK026821.1| Homo sapiens cDNA: FLJ23168 fis, clone LNG09905 Length = 2020 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 234 ccctcttcctcctcctgctg 215
>dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L04, full insert sequence Length = 916 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 166 ccgaccccgacgccgtggccggagcagttccacgcg 201 ||||| |||||||| ||||||| |||||||||||| Sbjct: 91 ccgacgccgacgccatggccggcccagttccacgcg 126
>ref|NM_209677.1| Eremothecium gossypii ADR228Wp (ADR228W), mRNA Length = 684 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttcctcctcctgctgccgct 80 |||||||||||||||||||| Sbjct: 333 ttcctcctcctgctgccgct 314
>ref|NM_208868.1| Eremothecium gossypii ACR113Wp (ACR113W), mRNA Length = 3309 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 2859 tccctcttcctcctcctgct 2840
>dbj|AK066106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052M01, full insert sequence Length = 4119 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 184 tccctcttcctcctcctgct 203
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ctcttcctcctcctgctgccgctc 81 |||| ||||||||||||||||||| Sbjct: 125329 ctctgcctcctcctgctgccgctc 125306
>ref|NM_182791.1| Homo sapiens coiled-coil domain containing 33 (CCDC33), mRNA Length = 2125 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 223 ccctcttcctcctcctgctg 204
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgtccctcttcctcctcctgctgc 76 |||||||||||||| ||||||||| Sbjct: 36060 cgtccctcttcctcttcctgctgc 36037
>emb|BX005066.3| Zebrafish DNA sequence from clone CH211-152F23 in linkage group 3, complete sequence Length = 172909 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 2515 cctcttcctcctcctgctgc 2534
>gb|AF013099.1|AF013099 Mus musculus multiubiquitin-chain-binding protein (Mcb1) mRNA, complete cds Length = 1252 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 723 ccgccgtgcctcttcctcctgccgctgccgct 692
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 15412499 tccctcttcctcctcctgct 15412518
>emb|AL607145.28| Mouse DNA sequence from clone RP23-230I5 on chromosome 4, complete sequence Length = 147896 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 147132 cctcttcctcctcctgctgc 147151
>gb|L22864.1|STMWHIB12X Streptomyces aureofaciens whiB operon, complete sequence Length = 4615 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 tcctgctgccgctcctcgcc 87 |||||||||||||||||||| Sbjct: 2574 tcctgctgccgctcctcgcc 2593
>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete sequence Length = 200242 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgccgctcctc 84 |||| ||||||||||||||| ||||||| Sbjct: 53739 cctcctcctcctcctgctgctgctcctc 53766
>gb|BC108914.1| Homo sapiens leucine rich repeat (in FLII) interacting protein 1, mRNA (cDNA clone MGC:119739 IMAGE:40027218), complete cds Length = 3365 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 tcttcctcctcctgctgccgctcc 82 |||||||||| ||||||||||||| Sbjct: 275 tcttcctccttctgctgccgctcc 252
>gb|AC133199.3| Mus musculus BAC clone RP23-263B18 from 6, complete sequence Length = 185278 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gtccctcttcctcctcctgc 73 |||||||||||||||||||| Sbjct: 13482 gtccctcttcctcctcctgc 13501
>gb|BC031684.1| Homo sapiens coiled-coil domain containing 33, mRNA (cDNA clone IMAGE:5166443), partial cds Length = 2144 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 1065 ccctcttcctcctcctgctg 1046
>gb|BC025689.1| Homo sapiens coiled-coil domain containing 33, mRNA (cDNA clone MGC:34145 IMAGE:5207361), complete cds Length = 2125 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccctcttcctcctcctgctg 75 |||||||||||||||||||| Sbjct: 223 ccctcttcctcctcctgctg 204
>ref|NM_004735.2| Homo sapiens leucine rich repeat (in FLII) interacting protein 1 (LRRFIP1), mRNA Length = 3648 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 tcttcctcctcctgctgccgctcc 82 |||||||||| ||||||||||||| Sbjct: 328 tcttcctccttctgctgccgctcc 305
>emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on chromosome 4, complete sequence Length = 219205 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 175376 cctcttcctcctcctgctgc 175357
>emb|AL611967.21| Mouse DNA sequence from clone RP23-121D17 on chromosome 4, complete sequence Length = 173824 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cctcttcctcctcctgctgc 76 |||||||||||||||||||| Sbjct: 1236 cctcttcctcctcctgctgc 1255
>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete sequence Length = 167364 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tccctcttcctcctcctgct 74 |||||||||||||||||||| Sbjct: 94181 tccctcttcctcctcctgct 94162
>emb|AJ223075.1|HSTRIP Homo sapiens mRNA for TRIP protein Length = 3656 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 tcttcctcctcctgctgccgctcc 82 |||||||||| ||||||||||||| Sbjct: 336 tcttcctccttctgctgccgctcc 313
>gb|M24845.1|MZEGLB1SA Maize embryo globulin S allele (7S-like) mRNA, complete cds Length = 2003 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 tcctcctcctgctgccgctcctcg 85 ||||||||||||| |||||||||| Sbjct: 1601 tcctcctcctgctcccgctcctcg 1578
>dbj|AB029146.1| Mus musculus mRNA for pUb-R5, complete cds Length = 887 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 711 ccgccgtgcctcttcctcctgccgctgccgct 680
>dbj|AB029145.1| Mus musculus mRNA for pUb-R4, complete cds Length = 1615 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 723 ccgccgtgcctcttcctcctgccgctgccgct 692
>dbj|AB029144.1| Mus musculus mRNA for pUb-R3, complete cds Length = 1773 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 721 ccgccgtgcctcttcctcctgccgctgccgct 690
>dbj|AB029143.1| Mus musculus mRNA for pUb-R2, complete cds Length = 1293 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 723 ccgccgtgcctcttcctcctgccgctgccgct 692
>dbj|AB029142.1| Mus musculus mRNA for pUb-R1, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 723 ccgccgtgcctcttcctcctgccgctgccgct 692
>dbj|AB029090.1| Mus musculus Psmd4 gene, complete cds Length = 9827 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 49 ccgccgtccctcttcctcctcctgctgccgct 80 ||||||| |||||||||||| | ||||||||| Sbjct: 8574 ccgccgtgcctcttcctcctgccgctgccgct 8543 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,672,487 Number of Sequences: 3902068 Number of extensions: 2672487 Number of successful extensions: 122387 Number of sequences better than 10.0: 202 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120514 Number of HSP's gapped (non-prelim): 1871 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
