ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet08b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding p... 767 0.0
2gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulga... 498 e-138
3gb|AY106149.1| Zea mays PCO102434 mRNA sequence 383 e-103
4dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 3e-88
5dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 3e-88
6dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 3e-88
7gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding prot... 325 7e-86
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
9dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
10gb|AY104104.1| Zea mays PCO079073 mRNA sequence 52 0.002
11gb|AY347803.1| Malus x domestica clone 8-2 chlorophyll a/b-bindi... 50 0.006
12dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-... 46 0.094
13dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-... 44 0.37
14emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 42 1.5
15gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.5
16ref|XM_631624.1| Dictyostelium discoideum AX4 hypothetical prote... 42 1.5
17gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosom... 42 1.5
18gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome ... 42 1.5
19gb|AF165214.1|AF165214 Bacteriophage D3, complete genome 42 1.5
20emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll ... 42 1.5
21emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I ligh... 42 1.5
22ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 42 1.5
23gb|AY495827.1| Oryctolagus cuniculus clone 179L1 kappa 1 light c... 42 1.5
24dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 42 1.5
25gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete seq... 40 5.8
26gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, com... 40 5.8
27gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, co... 40 5.8
28ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
29ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
30ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
31ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
32ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
33ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
34ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
35ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
36gb|AF154570.2| Mus musculus fibroblast growth factor receptor 1 ... 40 5.8
37gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's H... 40 5.8
38gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB... 40 5.8
39gb|BC096514.1| Xenopus tropicalis c6.1a protein, mRNA (cDNA clon... 40 5.8
40gb|AC183614.3| Pan troglodytes BAC clone CH251-186N21 from chrom... 40 5.8
41gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, c... 40 5.8
42ref|XM_823936.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.8
43gb|AC124992.14| Mus musculus chromosome 10, clone RP23-149L10, c... 40 5.8
44gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, c... 40 5.8
45gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, co... 40 5.8
46gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, comp... 40 5.8
47gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, com... 40 5.8
48emb|AJ245628.1|HSA245628 Homo sapiens EVN gene for pre-pro-enovin 40 5.8
49emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chro... 40 5.8
50gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 40 5.8
51gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p... 40 5.8
52ref|NM_001016457.2| Xenopus tropicalis c6.1a protein (c6.1a), mRNA 40 5.8
53gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, com... 40 5.8
54gb|AC162293.4| Mus musculus chromosome 3, clone RP24-172J1, comp... 40 5.8
55emb|AJ278665.1|ZMA278665 Zea mays mRNA for putative Rop family G... 40 5.8
56gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, comple... 40 5.8
57gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete... 40 5.8
58gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete seq... 40 5.8
59gb|AY125979.1| Zea mays hexokinase mRNA, complete cds 40 5.8
60emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding ... 40 5.8
61gb|AF279892.1| Rattus norvegicus 7-dehydrocholesterol reductase ... 40 5.8
62dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.8
63gb|AF349018.1|F349018S01 Homo sapiens topoisomerase I gene, exon... 40 5.8
64gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, comple... 40 5.8
65gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, c... 40 5.8
66gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1... 40 5.8
67gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, c... 40 5.8
68dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
69gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, c... 40 5.8
70gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, co... 40 5.8
71gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, com... 40 5.8
72dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.8
73gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, com... 40 5.8
74dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
75gb|DQ163915.1| Bacteriophage PA11, complete genome 40 5.8
76dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.8
77dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
78emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca... 40 5.8
79emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting ... 40 5.8
80dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
81dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
82dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
83dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
84dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
85dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
86dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
87dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
88dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
89gb|AY106111.1| Zea mays PCO074668 mRNA sequence 40 5.8
90emb|CR760965.2| Xenopus tropicalis finished cDNA, clone TEgg028n11 40 5.8
91gb|AF115765.1|AF115765 Homo sapiens Artemin gene, alternative fo... 40 5.8
92gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone hRPK.1... 40 5.8
93gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protei... 40 5.8
94emb|Y11740.1|HSY11740 H.sapiens whn gene, exon 1a and 1b 40 5.8 
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 784

 Score =  767 bits (387), Expect = 0.0
 Identities = 390/391 (99%)
 Strand = Plus / Plus

                                                                       
Query: 40  ccgcgcagcaaggagcagccagcatcgagagagcagcaatggctatggcgtcgtcaagcg 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ccgcgcagcaaggagcagccagcatcgagagagcagcaatggctatggcgtcgtcaagcg 62

                                                                       
Query: 100 ggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtcccggtccg 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtcccggtccg 122

                                                                       
Query: 160 gccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccg 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccg 182

                                                                       
Query: 220 ccgagtggttccccggccagccccgccccgcccatctggacgtctcctcgccaggggact 279
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 183 ccgagtggttccccggccagccccgccccgcccatctggacggctcctcgccaggggact 242

                                                                       
Query: 280 tcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagt 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagt 302

                                                                       
Query: 340 ccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccggagg 399
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccggagg 362

                                          
Query: 400 cgctggggctgggcaactgggtgaaggcgca 430
           |||||||||||||||||||||||||||||||
Sbjct: 363 cgctggggctgggcaactgggtgaaggcgca 393
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>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 878 nt]
          Length = 878

 Score =  498 bits (251), Expect = e-138
 Identities = 271/275 (98%), Gaps = 2/275 (0%)
 Strand = Plus / Plus

                                                                       
Query: 157 ccggccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgt 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ccggccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgt 61

                                                                       
Query: 217 ccgccgagtggttccccggccagccccgccccgcccatctggacgtctcctcgcca-ggg 275
           |||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||
Sbjct: 62  ccgccgagtggttccccggccagccccgccccgcccatctggccggctcctcgccaaggg 121

                                                                       
Query: 276 gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 335
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gacttcgggttcgacccc-tgggcctcgccaccgtgccggagaacttcgagcggttcaag 180

                                                                       
Query: 336 gagtccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccg 395
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagtccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccg 240

                                              
Query: 396 gaggcgctggggctgggcaactgggtgaaggcgca 430
           |||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggcgctggggctgggcaactgggtgaaggcgca 275
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>gb|AY106149.1| Zea mays PCO102434 mRNA sequence
          Length = 1081

 Score =  383 bits (193), Expect = e-103
 Identities = 320/360 (88%), Gaps = 3/360 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  agcagcaatggctatggcgtcgtcaagcgggctcaggagctgcagcgccgtgggcgtgcc 130
           |||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 58  agcagcaatggtgatggcgtcgtcgagcgggctgaggagctgcagcgccgtgggcgtgcc 117

                                                                       
Query: 131 gagcctgctggcgccttcgtcccggtccggccgctccggactgccgttctgcgcctacgc 190
            |||||||||||||| ||||||||||||||||||  | | | ||||||||||||| ||||
Sbjct: 118 cagcctgctggcgccgtcgtcccggtccggccgc--ctggc-gccgttctgcgccaacgc 174

                                                                       
Query: 191 caccacctccggccgcgtcaccatgtccgccgagtggttccccggccagccccgccccgc 250
           ||||||||| |||||||||||||||||||| |||||| | ||||||||||| ||||| ||
Sbjct: 175 caccacctctggccgcgtcaccatgtccgcggagtggatgcccggccagccacgccctgc 234

                                                                       
Query: 251 ccatctggacgtctcctcgccaggggacttcgggttcgaccccctgggcctcgccaccgt 310
           ||| || |||| |||||| || ||||||||||| ||||| || ||||||||||| |||||
Sbjct: 235 ccacctcgacggctcctctcccggggacttcggcttcgatccgctgggcctcgcgaccgt 294

                                                                       
Query: 311 gccggagaacttcgagcggttcaaggagtccgagatctaccactgccgctgggccatgct 370
           |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 295 gccggagaacttcgagcggttcaaggagtcagaggtgtaccactgccgctgggccatgct 354

                                                                       
Query: 371 ctgcgtgccaggggtgctggtgccggaggcgctggggctgggcaactgggtgaaggcgca 430
              ||| || ||| | ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 355 tgccgtccccgggatcctggtgccggaagctctgggcctgggcaactgggtgaaggcgca 414
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>dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A03, full
           insert sequence
          Length = 1046

 Score =  333 bits (168), Expect = 3e-88
 Identities = 237/260 (91%)
 Strand = Plus / Plus

                                                                       
Query: 171 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 230
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 164 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 223

                                                                       
Query: 231 cccggccagccccgccccgcccatctggacgtctcctcgccaggggacttcgggttcgac 290
           || |||||||| ||||||||||| || |||| |||||| || || |||||||||||||||
Sbjct: 224 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 283

                                                                       
Query: 291 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 350
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 284 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 343

                                                                       
Query: 351 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 410
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 344 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 403

                               
Query: 411 ggcaactgggtgaaggcgca 430
           |||||||||||| |||||||
Sbjct: 404 ggcaactgggtgcaggcgca 423



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 96  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 151
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 95  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 150
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>dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E07, full
           insert sequence
          Length = 1051

 Score =  333 bits (168), Expect = 3e-88
 Identities = 237/260 (91%)
 Strand = Plus / Plus

                                                                       
Query: 171 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 230
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 169 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 228

                                                                       
Query: 231 cccggccagccccgccccgcccatctggacgtctcctcgccaggggacttcgggttcgac 290
           || |||||||| ||||||||||| || |||| |||||| || || |||||||||||||||
Sbjct: 229 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 288

                                                                       
Query: 291 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 350
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 289 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 348

                                                                       
Query: 351 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 410
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 349 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 408

                               
Query: 411 ggcaactgggtgaaggcgca 430
           |||||||||||| |||||||
Sbjct: 409 ggcaactgggtgcaggcgca 428



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 96  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 151
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 100 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 155
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>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full
           insert sequence
          Length = 1958

 Score =  333 bits (168), Expect = 3e-88
 Identities = 237/260 (91%)
 Strand = Plus / Plus

                                                                       
Query: 171 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 230
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 166 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 225

                                                                       
Query: 231 cccggccagccccgccccgcccatctggacgtctcctcgccaggggacttcgggttcgac 290
           || |||||||| ||||||||||| || |||| |||||| || || |||||||||||||||
Sbjct: 226 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 285

                                                                       
Query: 291 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 350
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 286 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 345

                                                                       
Query: 351 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 410
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 346 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 405

                               
Query: 411 ggcaactgggtgaaggcgca 430
           |||||||||||| |||||||
Sbjct: 406 ggcaactgggtgcaggcgca 425



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 96  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 151
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 97  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 152
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>gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding protein precursor (Cab26)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1050

 Score =  325 bits (164), Expect = 7e-86
 Identities = 236/260 (90%)
 Strand = Plus / Plus

                                                                       
Query: 171 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 230
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 149 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 208

                                                                       
Query: 231 cccggccagccccgccccgcccatctggacgtctcctcgccaggggacttcgggttcgac 290
           || |||||||| ||||||||||| || |||| |||||| || || |||||||||||||||
Sbjct: 209 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 268

                                                                       
Query: 291 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 350
           || |||||||| |||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 269 ccgctgggccttgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 328

                                                                       
Query: 351 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 410
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 329 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 388

                               
Query: 411 ggcaactgggtgaaggcgca 430
           |||||||||||| |||||||
Sbjct: 389 ggcaactgggtgcaggcgca 408



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 96  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 151
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 80  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 135
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                            
Query: 276      gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 335
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12295875 gacttcgggttcgacccgctgggcctcgccaccgtgccggagaacttcgagcggttcaag 12295934

                                                    
Query: 336      gagtccgagatctaccactgccgctgggccatgctc 371
                ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 12295935 gagtcggaggtgtaccactgccggtgggccatgctc 12295970



 Score =  123 bits (62), Expect = 5e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                            
Query: 171      ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 230
                |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 12295670 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 12295729

                                                      
Query: 231      cccggccagccccgccccgcccatctggacgtctcctc 268
                || |||||||| ||||||||||| || |||| ||||||
Sbjct: 12295730 ccgggccagccacgccccgcccacctcgacggctcctc 12295767



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 96       agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 151
                |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 12295601 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 12295656



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                                  
Query: 381      ggggtgctggtgccggaggcgctggggctgggcaactgggtgaaggcgca 430
                |||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12296064 ggggtgttggtgccggaggcgctggggctgggcaactgggtgcaggcgca 12296113
to top
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0578B12
          Length = 151192

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                         
Query: 276   gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 335
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12335 gacttcgggttcgacccgctgggcctcgccaccgtgccggagaacttcgagcggttcaag 12394

                                                 
Query: 336   gagtccgagatctaccactgccgctgggccatgctc 371
             ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 12395 gagtcggaggtgtaccactgccggtgggccatgctc 12430



 Score =  123 bits (62), Expect = 5e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                         
Query: 171   ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 230
             |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 12130 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 12189

                                                   
Query: 231   cccggccagccccgccccgcccatctggacgtctcctc 268
             || |||||||| ||||||||||| || |||| ||||||
Sbjct: 12190 ccgggccagccacgccccgcccacctcgacggctcctc 12227



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                     
Query: 96    agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 151
             |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 12061 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 12116



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                               
Query: 381   ggggtgctggtgccggaggcgctggggctgggcaactgggtgaaggcgca 430
             |||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12524 ggggtgttggtgccggaggcgctggggctgggcaactgggtgcaggcgca 12573
to top
>gb|AY104104.1| Zea mays PCO079073 mRNA sequence
          Length = 867

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 270 ccaggggacttcgggttcgaccccctgggcctcg 303
           ||||| |||||||| |||||||||||||||||||
Sbjct: 313 ccaggtgacttcggcttcgaccccctgggcctcg 346
to top
>gb|AY347803.1| Malus x domestica clone 8-2 chlorophyll a/b-binding protein type I
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 462

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 211 ccatgtccgccgagtggttccccggccagccccgccc 247
           ||||||||||||||||| | |||||| ||||||||||
Sbjct: 158 ccatgtccgccgagtggatgcccggcgagccccgccc 194



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 309 gtgccggagaacttcgagcggttcaaggagtccgag 344
           ||||| |||||||| ||| |||||||||||||||||
Sbjct: 256 gtgccagagaacttagagaggttcaaggagtccgag 291
to top
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting
            chlorophyll-a/b protein of photosystem I (Type III),
            complete cds
          Length = 2389

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 275  ggacttcgggttcgaccccctgggcct 301
            ||||||||| |||||||||||||||||
Sbjct: 1055 ggacttcggcttcgaccccctgggcct 1081
to top
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting
           chlorophyll-a/b protein of photosystem I, complete cds
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 276 gacttcgggttcgaccccctgggcct 301
           |||||||| |||||||||||||||||
Sbjct: 402 gacttcggcttcgaccccctgggcct 427
to top
>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 230   ccccggccagccccgccccgc 250
             |||||||||||||||||||||
Sbjct: 10640 ccccggccagccccgccccgc 10660
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 355   gccgctgggccatgctctgcgtgcc 379
             ||||||||||||||||| |||||||
Sbjct: 18354 gccgctgggccatgctcggcgtgcc 18330
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>ref|XM_631624.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0187910),
            partial mRNA
          Length = 2787

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 15   tgttcttcttcctgttgttgt 35
            |||||||||||||||||||||
Sbjct: 2585 tgttcttcttcctgttgttgt 2565
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>gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosome 16, complete
             sequence
          Length = 171693

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    tgttcttcttcctgttgttgt 35
             |||||||||||||||||||||
Sbjct: 44932 tgttcttcttcctgttgttgt 44912
to top
>gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome 16, complete sequence
          Length = 172923

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    tgttcttcttcctgttgttgt 35
             |||||||||||||||||||||
Sbjct: 12791 tgttcttcttcctgttgttgt 12811
to top
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome
          Length = 56425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   tacgccaccacctccggccgc 206
             |||||||||||||||||||||
Sbjct: 33095 tacgccaccacctccggccgc 33115
to top
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein
           LHCP
          Length = 967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 350 ccactgccgctgggccatgct 370
           |||||||||||||||||||||
Sbjct: 364 ccactgccgctgggccatgct 384
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>emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I light-harvesting chlorophyll
           a/b-binding protein
          Length = 845

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 403 tggggctgggcaactgggtgaaggc 427
           ||||||||||||||||||| |||||
Sbjct: 355 tggggctgggcaactgggtaaaggc 379



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 212 catgtccgccgagtggttccccggccagccccgccc 247
           |||||| ||||||||| | || ||||||||||||||
Sbjct: 164 catgtctgccgagtggatgccgggccagccccgccc 199
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     gttcttcttcctgttgttgtc 36
              |||||||||||||||||||||
Sbjct: 611006 gttcttcttcctgttgttgtc 610986
to top
>gb|AY495827.1| Oryctolagus cuniculus clone 179L1 kappa 1 light chain immunglobulin
             gene region
          Length = 205144

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 381   ggggtgctggtgccggaggcg 401
             |||||||||||||||||||||
Sbjct: 37249 ggggtgctggtgccggaggcg 37269
to top
>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
             complete sequence, 4 of 5
          Length = 200000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    gttcttcttcctgttgttgtc 36
             |||||||||||||||||||||
Sbjct: 11006 gttcttcttcctgttgttgtc 10986
to top
>gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete sequence
          Length = 98801

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    agcgggctcaggagctgcag 115
             ||||||||||||||||||||
Sbjct: 71384 agcgggctcaggagctgcag 71365
to top
>gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, complete sequence
          Length = 207021

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tccccggccagccccgccccgccc 252
              |||||| |||||||||||||||||
Sbjct: 161740 tccccgcccagccccgccccgccc 161717
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>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence
          Length = 174746

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   ccagccccgccccgcccatc 255
             ||||||||||||||||||||
Sbjct: 25247 ccagccccgccccgcccatc 25266
to top
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 258 gacttcggcttcgaccccctgggtctcg 285
to top
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 259 gacttcggcttcgaccccctgggtctcg 286
to top
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 261 gacttcggcttcgaccccctgggtctcg 288
to top
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 268 gacttcggcttcgaccccctgggtctcg 295
to top
>gb|AF154570.2| Mus musculus fibroblast growth factor receptor 1 (Fgfr1) gene, exons
            6 to 9 and partial cds, alternatively spliced
          Length = 5993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  ccagccccgccccgcccatc 255
            ||||||||||||||||||||
Sbjct: 5458 ccagccccgccccgcccatc 5439
to top
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237425

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     cagcaaggagcagccagcat 64
              ||||||||||||||||||||
Sbjct: 144918 cagcaaggagcagccagcat 144899
to top
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
             (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
             (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
             genes, complete cds; insertion sequence IS6100A, complete
             sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
             cds; insertion sequence IS6100B, complete sequence; LinC
             (linC) gene, complete cds; insertion sequence IS6100C,
             complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
             (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
             (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
             (orfX), and ORFY (orfY) genes, complete cds
          Length = 41034

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 381   ggggtgctggtgccggaggcgctggggctggg 412
             |||||||||| || || |||||||||||||||
Sbjct: 38995 ggggtgctggcgctggtggcgctggggctggg 39026
to top
>gb|BC096514.1| Xenopus tropicalis c6.1a protein, mRNA (cDNA clone MGC:108101
           IMAGE:7004768), complete cds
          Length = 2375

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  agcgggctcaggagctgcag 115
           ||||||||||||||||||||
Sbjct: 736 agcgggctcaggagctgcag 755
to top
>gb|AC183614.3| Pan troglodytes BAC clone CH251-186N21 from chromosome 15, complete
             sequence
          Length = 136531

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gttcttcttcctgttgttgt 35
             ||||||||||||||||||||
Sbjct: 82632 gttcttcttcctgttgttgt 82613
to top
>gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, complete sequence
          Length = 37483

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tccccggccagccccgccccgccc 252
             ||||| ||||||||||||||||||
Sbjct: 23797 tccccagccagccccgccccgccc 23774
to top
>ref|XM_823936.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.1410)
            partial mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   agcgggctcaggagctgcag 115
            ||||||||||||||||||||
Sbjct: 1235 agcgggctcaggagctgcag 1254
to top
>gb|AC124992.14| Mus musculus chromosome 10, clone RP23-149L10, complete sequence
          Length = 194736

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     cagagcgcacgcctgttctt 21
             ||||||||||||||||||||
Sbjct: 16623 cagagcgcacgcctgttctt 16642
to top
>gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, complete sequence
          Length = 217553

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     gttcttcttcctgttgttgt 35
              ||||||||||||||||||||
Sbjct: 159062 gttcttcttcctgttgttgt 159081
to top
>gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, complete cds
          Length = 2031

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    cacgcctgttcttcttcctg 28
            ||||||||||||||||||||
Sbjct: 1410 cacgcctgttcttcttcctg 1391
to top
>gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, complete sequence
          Length = 241627

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gttcttcttcctgttgttgt 35
             ||||||||||||||||||||
Sbjct: 66713 gttcttcttcctgttgttgt 66694
to top
>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence
          Length = 155343

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   gttcttcttcctgttgttgt 35
            ||||||||||||||||||||
Sbjct: 2442 gttcttcttcctgttgttgt 2461
to top
>emb|AJ245628.1|HSA245628 Homo sapiens EVN gene for pre-pro-enovin
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tccccggccagccccgccccgccc 252
           |||| |||||||||||||||||||
Sbjct: 645 tcccgggccagccccgccccgccc 622
to top
>emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chromosome 1, complete
             sequence
          Length = 106769

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tccccggccagccccgccccgccc 252
             |||| |||||||||||||||||||
Sbjct: 56334 tcccgggccagccccgccccgccc 56311
to top
>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ttcttcttcctgttgttgtc 36
              ||||||||||||||||||||
Sbjct: 152853 ttcttcttcctgttgttgtc 152834
to top
>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete
              sequence
          Length = 213611

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ttcttcttcctgttgttgtc 36
              ||||||||||||||||||||
Sbjct: 102169 ttcttcttcctgttgttgtc 102150
to top
>ref|NM_001016457.2| Xenopus tropicalis c6.1a protein (c6.1a), mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  agcgggctcaggagctgcag 115
           ||||||||||||||||||||
Sbjct: 744 agcgggctcaggagctgcag 763
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>gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, complete sequence
          Length = 188017

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   tggggctgggcaactgggtgaagg 426
             |||| |||||||||||||||||||
Sbjct: 44947 tgggactgggcaactgggtgaagg 44970
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>gb|AC162293.4| Mus musculus chromosome 3, clone RP24-172J1, complete sequence
          Length = 171700

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   tggggctgggcaactgggtgaagg 426
             |||| |||||||||||||||||||
Sbjct: 63774 tgggactgggcaactgggtgaagg 63797
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>emb|AJ278665.1|ZMA278665 Zea mays mRNA for putative Rop family GTPase, ROP6 (rop6 gene)
          Length = 945

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   cacgcctgttcttcttcctg 28
           ||||||||||||||||||||
Sbjct: 622 cacgcctgttcttcttcctg 603
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>gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, complete sequence
          Length = 187670

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gttcttcttcctgttgttgt 35
             ||||||||||||||||||||
Sbjct: 63046 gttcttcttcctgttgttgt 63027
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>gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete sequence
          Length = 39440

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   cggccagccccgccccgccc 252
             ||||||||||||||||||||
Sbjct: 30471 cggccagccccgccccgccc 30490
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>gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete sequence
          Length = 96721

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    agcgggctcaggagctgcag 115
             ||||||||||||||||||||
Sbjct: 42241 agcgggctcaggagctgcag 42260
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>gb|AY125979.1| Zea mays hexokinase mRNA, complete cds
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 112 gcagcgccgtgggcgtgccgagcctgct 139
           ||||||||||||||||| |||| |||||
Sbjct: 190 gcagcgccgtgggcgtggcgaggctgct 163
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>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4
           protein of light-harvesting complex of photosystem I)
          Length = 1013

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 281 cgggttcgaccccctgggcctcgc 304
           ||||||||| ||||||||||||||
Sbjct: 223 cgggttcgatcccctgggcctcgc 246
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>gb|AF279892.1| Rattus norvegicus 7-dehydrocholesterol reductase (Dhcr7) gene,
           complete cds
          Length = 17734

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 234 ggccagccccgccccgccca 253
           ||||||||||||||||||||
Sbjct: 898 ggccagccccgccccgccca 879
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     ccctgggcctcgccaccgtg 311
               ||||||||||||||||||||
Sbjct: 4683828 ccctgggcctcgccaccgtg 4683847
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>gb|AF349018.1|F349018S01 Homo sapiens topoisomerase I gene, exon 1; nuclear gene for
           mitochondrial product
          Length = 1963

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 cggccagccccgccccgccc 252
           ||||||||||||||||||||
Sbjct: 696 cggccagccccgccccgccc 677
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>gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, complete sequence
          Length = 192570

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     ctgttcttcttcctgttgtt 33
              ||||||||||||||||||||
Sbjct: 146295 ctgttcttcttcctgttgtt 146314
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>gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, complete sequence
          Length = 123794

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 229  tccccggccagccccgccccgccc 252
            |||||| |||||||||||||||||
Sbjct: 4994 tccccgcccagccccgccccgccc 4971
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>gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1, complete sequence
          Length = 190744

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    tccccggccagccccgccccgccc 252
              |||| |||||||||||||||||||
Sbjct: 154341 tcccgggccagccccgccccgccc 154364
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>gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, complete sequence
          Length = 40546

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tccccggccagccccgccccgccc 252
             ||||| ||||||||||||||||||
Sbjct: 33970 tccccagccagccccgccccgccc 33947
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 276      gacttcgggttcgaccccctgggcctcg 303
                |||||||| |||||||||||||| ||||
Sbjct: 23304570 gacttcggcttcgaccccctgggtctcg 23304597
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>gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, complete sequence
          Length = 38342

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   tccccggccagccccgccccgccc 252
             ||||| ||||||||||||||||||
Sbjct: 32688 tccccagccagccccgccccgccc 32665
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>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  cggccagccccgccccgccc 252
            ||||||||||||||||||||
Sbjct: 4947 cggccagccccgccccgccc 4966



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  cggccagccccgccccgccc 252
            ||||||||||||||||||||
Sbjct: 4923 cggccagccccgccccgccc 4942



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  cggccagccccgccccgccc 252
            ||||||||||||||||||||
Sbjct: 4899 cggccagccccgccccgccc 4918
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>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence
          Length = 124060

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   cggccagccccgccccgccc 252
             ||||||||||||||||||||
Sbjct: 84248 cggccagccccgccccgccc 84267
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     tcccggtccggccgctccgg 169
               ||||||||||||||||||||
Sbjct: 4732354 tcccggtccggccgctccgg 4732335
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>gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, complete sequence
          Length = 36235

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gttcttcttcctgttgttgt 35
             ||||||||||||||||||||
Sbjct: 28936 gttcttcttcctgttgttgt 28917
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 276   gacttcgggttcgaccccctgggcctcg 303
             |||||||| |||||||||||||| ||||
Sbjct: 59828 gacttcggcttcgaccccctgggtctcg 59855
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>gb|DQ163915.1| Bacteriophage PA11, complete genome
          Length = 49639

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  acgccaccacctccggccgc 206
            ||||||||||||||||||||
Sbjct: 6603 acgccaccacctccggccgc 6584
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     tgccggaggcgctggggctg 410
               ||||||||||||||||||||
Sbjct: 8029846 tgccggaggcgctggggctg 8029827
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>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full
           insert sequence
          Length = 1088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 279 gacttcggcttcgaccccctgggtctcg 306
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>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein
           of light-harvesting complex of photosystem I) (partial)
          Length = 968

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 281 cgggttcgaccccctgggcctcgc 304
           ||||||||| ||||||||||||||
Sbjct: 200 cgggttcgatcccctgggcctcgc 223
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>emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting complex I chlorophyll
           binding protein
          Length = 1141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 cactgccgctgggccatgct 370
           ||||||||||||||||||||
Sbjct: 268 cactgccgctgggccatgct 287
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>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full
           insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
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>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full
           insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
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>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 295 gacttcggcttcgaccccctgggtctcg 322
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>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full
           insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 261 gacttcggcttcgaccccctgggtctcg 288
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>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full
           insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
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>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full
           insert sequence
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 258 gacttcggcttcgaccccctgggtctcg 285
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>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 259 gacttcggcttcgaccccctgggtctcg 286
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>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full
           insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 353 gacttcggcttcgaccccctgggtctcg 380
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>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full
           insert sequence
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 268 gacttcggcttcgaccccctgggtctcg 295
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>gb|AY106111.1| Zea mays PCO074668 mRNA sequence
          Length = 1962

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 112 gcagcgccgtgggcgtgccgagcctgct 139
           ||||||||||||||||| |||| |||||
Sbjct: 293 gcagcgccgtgggcgtggcgaggctgct 266
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>emb|CR760965.2| Xenopus tropicalis finished cDNA, clone TEgg028n11
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  agcgggctcaggagctgcag 115
           ||||||||||||||||||||
Sbjct: 744 agcgggctcaggagctgcag 763
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>gb|AF115765.1|AF115765 Homo sapiens Artemin gene, alternative forms, complete cds
          Length = 1652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tccccggccagccccgccccgccc 252
           |||| |||||||||||||||||||
Sbjct: 915 tcccgggccagccccgccccgccc 892
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>gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone  hRPK.192_H_23, complete sequence
          Length = 185215

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tccccggccagccccgccccgccc 252
              |||||| |||||||||||||||||
Sbjct: 149804 tccccgcccagccccgccccgccc 149781
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>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete
           cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 276 gacttcgggttcgaccccctgggcctcg 303
           |||||||| |||||||||||||| ||||
Sbjct: 235 gacttcggcttcgaccccctgggtctcg 262
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>emb|Y11740.1|HSY11740 H.sapiens whn gene, exon 1a and 1b
          Length = 13380

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  tccccggccagccccgccccgccc 252
            |||||| |||||||||||||||||
Sbjct: 6999 tccccgcccagccccgccccgccc 7022


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,997,621
Number of Sequences: 3902068
Number of extensions: 2997621
Number of successful extensions: 66069
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65499
Number of HSP's gapped (non-prelim): 565
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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