Clone Information

BLAST Search Result

Clone Name	baet08b04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AVT1_YEAST (P47082) Vacuolar amino acid transporter 1	44	2e-04
2	VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (...	38	0.008
3	VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter...	38	0.008
4	LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like ...	37	0.014
5	S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Pr...	37	0.014
6	S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Prot...	35	0.070
7	S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Pr...	35	0.070
8	YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV	34	0.12
9	LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2	34	0.12
10	AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx ca...	34	0.16
11	LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like ...	33	0.27
12	LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1	33	0.35
13	VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter...	32	0.59
14	LYSI_CORGL (P35865) L-lysine transport protein (L-lysine permease)	32	0.59
15	LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like ...	32	0.78
16	VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter...	31	1.0
17	AVT7_YEAST (P40501) Vacuolar amino acid transporter 7	31	1.0
18	LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like ...	31	1.3
19	LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4	31	1.3
20	CSTA_BACSU (P94532) Carbon starvation protein A homolog	30	1.7
21	LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like ...	30	2.3
22	LNT_SALTY (O87576) Apolipoprotein N-acyltransferase (EC 2.3.1.-)...	30	2.9
23	LNT_SALTI (Q8Z8G7) Apolipoprotein N-acyltransferase (EC 2.3.1.-)...	30	2.9
24	LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3	30	2.9
25	PCBB_PROMM (Q7V6U4) Divinyl chlorophyll a/b light-harvesting pro...	29	3.8
26	MTR_NEUCR (P38680) N amino acid transport system protein (Methyl...	29	3.8
27	TUTB_ENTAG (Q47825) Tyrosine permease	29	5.0
28	YCFZ_ECOLI (P75961) Inner membrane protein ycfZ	29	5.0
29	AVT3_YEAST (P36062) Vacuolar amino acid transporter 3	29	5.0
30	MUTL_XANCP (Q8P8E4) DNA mismatch repair protein mutL	29	5.0
31	LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like ...	29	5.0
32	ARCD_SHIFL (P0AAE7) Putative arginine/ornithine antiporter	29	5.0
33	ARCD_ECOLI (P0AAE5) Putative arginine/ornithine antiporter	29	5.0
34	ARCD_ECOL6 (P0AAE6) Putative arginine/ornithine antiporter	29	5.0
35	GPR56_HUMAN (Q9Y653) G-protein coupled receptor 56 precursor (TM...	29	5.0
36	GPR56_PONPY (Q50DM5) G-protein coupled receptor 56 precursor	29	5.0
37	GPR56_MACMU (Q50DM8) G-protein coupled receptor 56 precursor	29	5.0
38	GPR56_GORGO (Q50DM6) G-protein coupled receptor 56 precursor	29	5.0
39	Y3568_PSEAE (P28812) Hypothetical protein PA3568	28	6.6
40	GPR56_PANTR (Q50DM7) G-protein coupled receptor 56 precursor	28	6.6
41	GPR56_MOUSE (Q8K209) G-protein coupled receptor 56 precursor (Se...	28	6.6
42	LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like ...	28	6.6
43	GBRAL_DROME (Q24352) Gamma-aminobutyric-acid receptor alpha-like...	28	8.6
44	CXCR2_RAT (P35407) High affinity interleukin-8 receptor B (IL-8R...	28	8.6
45	GPR56_RAT (Q8K3V3) G-protein coupled receptor 56 precursor	28	8.6
46	TYRP_SHIFL (P0AAD5) Tyrosine-specific transport protein (Tyrosin...	28	8.6
47	TYRP_ECOLI (P0AAD4) Tyrosine-specific transport protein (Tyrosin...	28	8.6
48	LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like ...	28	8.6

>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = +1

Query: 223 ITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDDAVAGKRNYTY 402
           I  +IG G+L+LP  +   GWV G   L +FAL T+ T+ LL  C  +D  +    +  Y
Sbjct: 218 INVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGY 277

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>VIAAT_RAT (O35458) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (rGVAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 25/87 (28%), Positives = 43/87 (49%)
 Frame = +1

Query: 97  GGLPAPAGDLRRRVIAAADDYSLDDDGKPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQ 276
           GG P P    + + + A  ++   D  KP+ T   W A  +V  A+ G  VL LP+++  
Sbjct: 88  GGAPLPPSGSKDQAVGAGGEFGGHD--KPKITA--WEAGWNVTNAIQGMFVLGLPYAILH 143

Query: 277 LGWVAGPATLLLFALITYYTSVLLGDC 357
            G++ G   ++  A++  YT  +L  C
Sbjct: 144 GGYL-GLFLIIFAAVVCCYTGKILIAC 169

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>VIAAT_MOUSE (O35633) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (mVIAAT) (mVGAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 25/87 (28%), Positives = 43/87 (49%)
 Frame = +1

Query: 97  GGLPAPAGDLRRRVIAAADDYSLDDDGKPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQ 276
           GG P P    + + + A  ++   D  KP+ T   W A  +V  A+ G  VL LP+++  
Sbjct: 88  GGAPLPPSGSKDQAVGAGGEFGGHD--KPKITA--WEAGWNVTNAIQGMFVLGLPYAILH 143

Query: 277 LGWVAGPATLLLFALITYYTSVLLGDC 357
            G++ G   ++  A++  YT  +L  C
Sbjct: 144 GGYL-GLFLIIFAAVVCCYTGKILIAC 169

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>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDD 372
           G+VW A     +  +   +L+LP+S +QLG V+G    + + LI  +T+ L+   Y    
Sbjct: 46  GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISVLYVEYR 105

Query: 373 AVAGKRNYTYMDAV 414
           A   K N  + + V
Sbjct: 106 ARKEKENVNFKNHV 119

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>S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 476

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = +1

Query: 160 SLDDDGKPRRTG----TVWTASA-HVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALI 324
           +L   G  +R G    T W  +  H++   IG+G+L LP +V   G V GP +LL+  ++
Sbjct: 31  NLSSPGSYQRFGQSNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIV 90

Query: 325 TYYTSVLLGDC 357
             +   +L  C
Sbjct: 91  AVHCMGILVKC 101

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>S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
           (Lysosomal amino acid transporter 1) (LYAAT-1) (Neutral
           amino acid/proton symporter)
          Length = 475

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 217 HVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357
           H++   IG+G+L LP +V   G + GP +LL+  ++  +   +L  C
Sbjct: 54  HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100

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>S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 475

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 217 HVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357
           H++   IG+G+L LP +V   G + GP +LL+  ++  +   +L  C
Sbjct: 54  HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100

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>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV|
          Length = 615

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = +1

Query: 166 DDDGKPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVL 345
           D  GK     T+++    +   ++G+ +L++PW++ Q G V G   +L  A I +YT+ +
Sbjct: 158 DVSGKQGSIVTIFS----IWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYI 213

Query: 346 L 348
           +
Sbjct: 214 V 214

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>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2|
          Length = 482

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
 Frame = +1

Query: 112 PAGDLRRRVIAAADD---------YSLDDDGKPRRT------GTVWTASAHVITAVIGSG 246
           PAGD     I A              ++ DGK   T      G+VW A     +  +   
Sbjct: 3   PAGDQAEEAIVADAGKEEAEVRAAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVAQV 62

Query: 247 VLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           +L+LP+S +QLG ++G    + + L+  +T+ L+   Y
Sbjct: 63  LLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLY 100

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>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein|
           1) (Polar auxin transport inhibitor resistant protein 1)
          Length = 485

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+VW A     +  +   +L+LP+S +QLG ++G    + + L+  +T+ L+   Y
Sbjct: 46  GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLY 101

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>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)|
           (MtLAX2)
          Length = 484

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 18/74 (24%), Positives = 37/74 (50%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDD 372
           G+VW A     +  +   +L+LP+S +QLG ++G    + + ++  +T+ L+   Y    
Sbjct: 46  GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYR 105

Query: 373 AVAGKRNYTYMDAV 414
           +   K N  + + V
Sbjct: 106 SRKEKENVNFKNHV 119

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>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1|
          Length = 492

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+VW A     +  +   +L+LP+S +QLG ++G    L +  +  +T+ L+   Y
Sbjct: 54  GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLY 109

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>VIAAT_MACFA (Q95KE2) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (Solute carrier family 32 member 1)
          Length = 525

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 25/86 (29%), Positives = 41/86 (47%)
 Frame = +1

Query: 100 GLPAPAGDLRRRVIAAADDYSLDDDGKPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQL 279
           G P P    + +V A  +    D   KP+ T   W A  +V  A+ G  VL LP+++   
Sbjct: 90  GAPLPPSGSKDQVGAGGEFGGHD---KPKITA--WEAGWNVTNAIQGMFVLGLPYAILHG 144

Query: 280 GWVAGPATLLLFALITYYTSVLLGDC 357
           G++ G   ++  A++  YT  +L  C
Sbjct: 145 GYL-GLFLIIFAAVVCCYTGKILIAC 169

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>LYSI_CORGL (P35865) L-lysine transport protein (L-lysine permease)|
          Length = 501

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = +1

Query: 187 RTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALI 324
           RT ++ T  A +I + +G+G+ S+P ++   G VAGP  +L+  LI
Sbjct: 18  RTVSIRTLIALIIGSTVGAGIFSIPQNI---GSVAGPGAMLIGWLI 60

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>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)|
          Length = 488

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+ W A     +  +   +L+LP+S +QLG ++G    + + L+  +T+ L+   Y
Sbjct: 51  GSAWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLY 106

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>VIAAT_HUMAN (Q9H598) Vesicular inhibitory amino acid transporter (GABA and|
           glycine transporter) (Vesicular GABA transporter)
           (hVIAAT) (Solute carrier family 32 member 1)
          Length = 525

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 196 TVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357
           T W A  +V  A+ G  VL LP+++   G++ G   ++  A++  YT  +L  C
Sbjct: 117 TAWEAGWNVTNAIQGMFVLGLPYAILHGGYL-GLFLIIFAAVVCCYTGKILIAC 169

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>AVT7_YEAST (P40501) Vacuolar amino acid transporter 7|
          Length = 490

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 14/59 (23%), Positives = 33/59 (55%)
 Frame = +1

Query: 190 TGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRS 366
           T +  +++A+++  ++G+G L++P+S    G + G    LL A+ +     +L  C ++
Sbjct: 4   TSSALSSTANLVKTIVGAGTLAIPYSFKSDGVLVGVILTLLAAVTSGLGLFVLSKCSKT 62

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>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)|
           (MtLAX1)
          Length = 479

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/74 (24%), Positives = 38/74 (51%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCYRSDD 372
           G+V+ A     +  +   +L+LP+S +QLG ++G    + + L+  +T+ L+   Y    
Sbjct: 45  GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYR 104

Query: 373 AVAGKRNYTYMDAV 414
           +   K N ++ + V
Sbjct: 105 SRKEKENVSFKNHV 118

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>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4|
          Length = 480

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+V+ A     +  +   +L+LP+S +QLG  +G A  + + L+  +T+ L+   Y
Sbjct: 53  GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLY 108

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>CSTA_BACSU (P94532) Carbon starvation protein A homolog|
          Length = 598

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 169 DDGKPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALI 324
           +DGK       W +  H   A+  +G L  P   AQ G++ G   LL+ A+I
Sbjct: 44  EDGKDYVPTNKWVSFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVI 95

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>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)|
          Length = 470

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+V+ A     +  +   +L+LP+S +QLG ++G    L + L+  +T+ L+   Y
Sbjct: 44  GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMMSGILFQLFYGLMGSWTAYLISVLY 99

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>LNT_SALTY (O87576) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase) (Copper homeostasis protein cutE)
          Length = 512

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 232 VIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLG 351
           + GSG+  +  S+AQ G + GP  + L  L+  Y S+  G
Sbjct: 67  LFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTG 106

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>LNT_SALTI (Q8Z8G7) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase) (Copper homeostasis protein cutE)
          Length = 512

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 232 VIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLG 351
           + GSG+  +  S+AQ G + GP  + L  L+  Y S+  G
Sbjct: 67  LFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTG 106

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>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3|
          Length = 547

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+ + A     +  +   +L+LP+S AQLG  +G    L + L+  +T+ L+   Y
Sbjct: 61  GSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSWTAYLISILY 116

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>PCBB_PROMM (Q7V6U4) Divinyl chlorophyll a/b light-harvesting protein pcbB|
          Length = 350

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
 Frame = +1

Query: 190 TGTVW---TASAHVITAVIGSGVLS----LPWSVAQLGWVAGPATLLLFALITYYTSVLL 348
           +G +W   T  A   T   G G+LS    L W++A +GW+A  A     +  T Y     
Sbjct: 215 SGGLWHIVTKQAGEYTTFKGKGILSAEAQLSWALAGVGWMALVAAFWCASNTTIYPDTFF 274

Query: 349 GD 354
           G+
Sbjct: 275 GE 276

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>MTR_NEUCR (P38680) N amino acid transport system protein (Methyltryptophan|
           resistance protein)
          Length = 470

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 220 VITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLG 351
           +I   I  G LSLP + A LG V G    +   LI  YT+ ++G
Sbjct: 62  LIVEAIALGSLSLPGAFATLGMVPGVILSVGMGLICIYTAHVIG 105

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>TUTB_ENTAG (Q47825) Tyrosine permease|
          Length = 416

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 220 VITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLL 348
           +I  VIG G+ SLP ++A + +      L L A++   T ++L
Sbjct: 17  IIATVIGGGMFSLPIAMAGIWFPGASIILTLIAIMMLLTGLML 59

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>YCFZ_ECOLI (P75961) Inner membrane protein ycfZ|
          Length = 262

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 259 PWSVAQLGWVAGPATLLLFALITYYTS 339
           P S   LG++A  AT +LF+ I YYT+
Sbjct: 178 PGSTNTLGFIAWAATFILFSRIFYYTT 204

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>AVT3_YEAST (P36062) Vacuolar amino acid transporter 3|
          Length = 692

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 181 PRRTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITY 330
           P ++ TV  A   ++ + +G+GVL LP +    GW      LL  ALI+Y
Sbjct: 294 PHKSSTV-KAVLLLLKSFVGTGVLFLPKAFHNGGWGFSALCLLSCALISY 342

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>MUTL_XANCP (Q8P8E4) DNA mismatch repair protein mutL|
          Length = 624

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = +1

Query: 142 AAADDYSLDDDGKPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQL 279
           A A   +L DDG+P  +GT   A+AH       SGV  L ++VAQL
Sbjct: 402 APAAGSALRDDGQPVLSGTGLPATAH------DSGVPPLGYAVAQL 441

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>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)|
           (MtLAX5)
          Length = 490

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
 Frame = +1

Query: 115 AGDLRRRVIAAADDYSLDDDGKPRRT------------GTVWTASAHVITAVIGSGVLSL 258
           A D     +   +   ++ +GKP +             G+ + A     +  +   +L+L
Sbjct: 4   ANDKVAETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFSCASNQVAQVLLTL 63

Query: 259 PWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           P+S +QLG ++G    L + ++  +T+ L+   Y
Sbjct: 64  PYSFSQLGMLSGILFQLFYGILGSWTAYLISILY 97

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>ARCD_SHIFL (P0AAE7) Putative arginine/ornithine antiporter|
          Length = 460

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/34 (44%), Positives = 25/34 (73%)
 Frame = +1

Query: 211 SAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLL 312
           +A V+++++G+GV SLP ++A    VA PA LL+
Sbjct: 11  TALVLSSMLGAGVFSLPQNMAA---VASPAALLI 41

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>ARCD_ECOLI (P0AAE5) Putative arginine/ornithine antiporter|
          Length = 460

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/34 (44%), Positives = 25/34 (73%)
 Frame = +1

Query: 211 SAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLL 312
           +A V+++++G+GV SLP ++A    VA PA LL+
Sbjct: 11  TALVLSSMLGAGVFSLPQNMAA---VASPAALLI 41

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>ARCD_ECOL6 (P0AAE6) Putative arginine/ornithine antiporter|
          Length = 460

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/34 (44%), Positives = 25/34 (73%)
 Frame = +1

Query: 211 SAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLL 312
           +A V+++++G+GV SLP ++A    VA PA LL+
Sbjct: 11  TALVLSSMLGAGVFSLPQNMAA---VASPAALLI 41

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>GPR56_HUMAN (Q9Y653) G-protein coupled receptor 56 precursor (TM7XN1 protein)|
          Length = 693

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 214 AHVITAVIGSGVLSLPWSVAQLGWVAGP---ATLLLFALITYYTSVLL 348
           +HV+T +  S VL LPW++    + +G      L LF++IT +   L+
Sbjct: 607 SHVLTLLGLSLVLGLPWALIFFSFASGTFQLVVLYLFSIITSFQGFLI 654

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>GPR56_PONPY (Q50DM5) G-protein coupled receptor 56 precursor|
          Length = 687

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 214 AHVITAVIGSGVLSLPWSVAQLGWVAGP---ATLLLFALITYYTSVLL 348
           +HV+T +  S VL LPW++    + +G      L LF++IT +   L+
Sbjct: 601 SHVLTLLGLSLVLGLPWALIFFSFASGTFQLVVLYLFSIITSFQGFLI 648

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>GPR56_MACMU (Q50DM8) G-protein coupled receptor 56 precursor|
          Length = 687

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 214 AHVITAVIGSGVLSLPWSVAQLGWVAGP---ATLLLFALITYYTSVLL 348
           +HV+T +  S VL LPW++    + +G      L LF++IT +   L+
Sbjct: 601 SHVLTLLGLSLVLGLPWALIFFSFASGTFQLVVLYLFSIITSFQGFLI 648

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>GPR56_GORGO (Q50DM6) G-protein coupled receptor 56 precursor|
          Length = 687

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 214 AHVITAVIGSGVLSLPWSVAQLGWVAGP---ATLLLFALITYYTSVLL 348
           +HV+T +  S VL LPW++    + +G      L LF++IT +   L+
Sbjct: 601 SHVLTLLGLSLVLGLPWALIFFSFASGTFQLVVLYLFSIITSFQGFLI 648

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>Y3568_PSEAE (P28812) Hypothetical protein PA3568|
          Length = 628

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +1

Query: 157 YSLDDDGKP----RRTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALI 324
           Y+    GKP    R  G    A  + +  + G     + W ++ +GWV G + ++   L+
Sbjct: 238 YTSGTTGKPKGIVRDNGGHAVAVRYAVRTIYGMQAGDVWWGISDVGWVVGHSLIVYGPLM 297

Query: 325 TYYTSVLL-GDCYRSDDAVA 381
              T+V   G   R+ DA A
Sbjct: 298 CGCTTVFYEGKPVRTPDAGA 317

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>GPR56_PANTR (Q50DM7) G-protein coupled receptor 56 precursor|
          Length = 687

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 214 AHVITAVIGSGVLSLPWSVAQLGWVAGP---ATLLLFALITYYTSVLL 348
           +HV+T +  S VL LPW++    + +G      L LF++IT +   L+
Sbjct: 601 SHVLTLLGLSLVLGLPWALIFFSFASGTFQLVILYLFSIITSFQGFLI 648

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>GPR56_MOUSE (Q8K209) G-protein coupled receptor 56 precursor (Serpentine|
           receptor cyt28)
          Length = 687

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +1

Query: 217 HVITAVIGSGVLSLPWSVAQLGWVAGP---ATLLLFALITYYTSVLL 348
           HV+T +  S VL LPW++    + +G      L LF++IT +   L+
Sbjct: 602 HVLTLLGLSLVLGLPWALVFFSFASGTFQLVILYLFSIITSFQGFLI 648

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>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)|
           (MtLAX3)
          Length = 465

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+V+ A     +  +   +L+LP+S +QLG ++G    + + L+  +T+ ++   Y
Sbjct: 39  GSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLY 94

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>GBRAL_DROME (Q24352) Gamma-aminobutyric-acid receptor alpha-like precursor|
           (GABA(A) receptor alpha-like and glycine receptor-like
           subunit of Drosophila) (GRD)
          Length = 686

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 298 ATLLLFALITYYTSVLLGDCY 360
           AT+L FA++ YYT    G+CY
Sbjct: 467 ATILQFAVVHYYTKYGSGECY 487

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>CXCR2_RAT (P35407) High affinity interleukin-8 receptor B (IL-8R B) (CXCR-2)|
           (GRO/MGSA receptor) (CD182 antigen)
          Length = 359

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
 Frame = +1

Query: 250 LSLP-WSVAQL-GWVAGPATLLLFAL---ITYYTSVLLGDCYRSDDAVA 381
           L+LP W+ +++ GW+ G     +F+    IT+Y+SVLL  C   D  +A
Sbjct: 98  LTLPVWAASKVNGWIFGSFLCKVFSFLQEITFYSSVLLLACISMDRYLA 146

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>GPR56_RAT (Q8K3V3) G-protein coupled receptor 56 precursor|
          Length = 687

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 217 HVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTS 339
           HV+T +  S VL LPW++    + +G   L++  L +  TS
Sbjct: 602 HVLTLLGLSLVLGLPWALVFFSFASGTFQLVIIYLFSIMTS 642

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>TYRP_SHIFL (P0AAD5) Tyrosine-specific transport protein (Tyrosine permease)|
          Length = 403

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +1

Query: 178 KPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357
           K R  G+V+  +       IG+G+L++P + A +G+      L+    +  YT++LL + 
Sbjct: 2   KNRTLGSVFIVAG----TTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEV 57

Query: 358 YRSDDAVAG 384
           Y+   A  G
Sbjct: 58  YQHVPADTG 66

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>TYRP_ECOLI (P0AAD4) Tyrosine-specific transport protein (Tyrosine permease)|
          Length = 403

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +1

Query: 178 KPRRTGTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDC 357
           K R  G+V+  +       IG+G+L++P + A +G+      L+    +  YT++LL + 
Sbjct: 2   KNRTLGSVFIVAG----TTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEV 57

Query: 358 YRSDDAVAG 384
           Y+   A  G
Sbjct: 58  YQHVPADTG 66

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>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)|
          Length = 483

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/56 (25%), Positives = 30/56 (53%)
 Frame = +1

Query: 193 GTVWTASAHVITAVIGSGVLSLPWSVAQLGWVAGPATLLLFALITYYTSVLLGDCY 360
           G+ + A     +  +   +L+LP+S +QLG ++G    L + ++  +T+ L+   Y
Sbjct: 40  GSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILY 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,447,530
Number of Sequences: 219361
Number of extensions: 407225
Number of successful extensions: 1821
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1821
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result