| Clone Name | baet07h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 151 bits (76), Expect = 1e-33 Identities = 196/236 (83%) Strand = Plus / Plus Query: 9 tggttggctgccgttgtcgctgtatggcaattcacacacttcaagctcagacaagtcgca 68 ||||||| ||||| | || || |||||||| ||||||||||| ||||||| |||||| || Sbjct: 12283476 tggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcaca 12283535 Query: 69 tgctactgggagtattgcttcatctttgccatccaacctatgccgccatttctcctttgc 128 |||||||||| |||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 12283536 cactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgt 12283595 Query: 129 agagatcaaggctgcaacgaagaactttgacgagtcacggatccttggtgttggtgggtt 188 |||||||||||||| || || |||||||| ||||| | ||||||| || ||||| || Sbjct: 12283596 ggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttt 12283655 Query: 189 cggtaaagttcaccagggagagatcgatgggggctcaactaaggtggctatcaagc 244 ||||||||| ||| |||||||| || || || |||| |||||||||||||||| Sbjct: 12283656 tggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagc 12283711
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 151 bits (76), Expect = 1e-33 Identities = 196/236 (83%) Strand = Plus / Plus Query: 9 tggttggctgccgttgtcgctgtatggcaattcacacacttcaagctcagacaagtcgca 68 ||||||| ||||| | || || |||||||| ||||||||||| ||||||| |||||| || Sbjct: 12280239 tggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcaca 12280298 Query: 69 tgctactgggagtattgcttcatctttgccatccaacctatgccgccatttctcctttgc 128 |||||||||| |||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 12280299 cactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgt 12280358 Query: 129 agagatcaaggctgcaacgaagaactttgacgagtcacggatccttggtgttggtgggtt 188 |||||||||||||| || || |||||||| ||||| | ||||||| || ||||| || Sbjct: 12280359 ggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttt 12280418 Query: 189 cggtaaagttcaccagggagagatcgatgggggctcaactaaggtggctatcaagc 244 ||||||||| ||| |||||||| || || || |||| |||||||||||||||| Sbjct: 12280419 tggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagc 12280474
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 151 bits (76), Expect = 1e-33 Identities = 196/236 (83%) Strand = Plus / Plus Query: 9 tggttggctgccgttgtcgctgtatggcaattcacacacttcaagctcagacaagtcgca 68 ||||||| ||||| | || || |||||||| ||||||||||| ||||||| |||||| || Sbjct: 53009 tggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcaca 53068 Query: 69 tgctactgggagtattgcttcatctttgccatccaacctatgccgccatttctcctttgc 128 |||||||||| |||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 53069 cactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgt 53128 Query: 129 agagatcaaggctgcaacgaagaactttgacgagtcacggatccttggtgttggtgggtt 188 |||||||||||||| || || |||||||| ||||| | ||||||| || ||||| || Sbjct: 53129 ggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttt 53188 Query: 189 cggtaaagttcaccagggagagatcgatgggggctcaactaaggtggctatcaagc 244 ||||||||| ||| |||||||| || || || |||| |||||||||||||||| Sbjct: 53189 tggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagc 53244
>dbj|AK099791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097C16, full insert sequence Length = 3171 Score = 151 bits (76), Expect = 1e-33 Identities = 196/236 (83%) Strand = Plus / Plus Query: 9 tggttggctgccgttgtcgctgtatggcaattcacacacttcaagctcagacaagtcgca 68 ||||||| ||||| | || || |||||||| ||||||||||| ||||||| |||||| || Sbjct: 1715 tggttggttgccgctctcactttatggcaactcacacacttccagctcagccaagtcaca 1774 Query: 69 tgctactgggagtattgcttcatctttgccatccaacctatgccgccatttctcctttgc 128 |||||||||| |||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 1775 cactactgggagccatgcttcgtctttgccatccaacctgtgccgccatttctcatttgt 1834 Query: 129 agagatcaaggctgcaacgaagaactttgacgagtcacggatccttggtgttggtgggtt 188 |||||||||||||| || || |||||||| ||||| | ||||||| || ||||| || Sbjct: 1835 ggagatcaaggctgcgacaaacaactttgatgagtccctcctccttggcgtgggtggttt 1894 Query: 189 cggtaaagttcaccagggagagatcgatgggggctcaactaaggtggctatcaagc 244 ||||||||| ||| |||||||| || || || |||| |||||||||||||||| Sbjct: 1895 tggtaaagtttaccgtggagagattgacggaggagcaaccaaggtggctatcaagc 1950
>ref|NM_191406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2691 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 31 tatggcaattcacacacttcaagctcagacaagtcgcatgctactgggagtattgcttca 90 |||||||| |||||| | || |||||| ||| || ||| |||||||||| |||||| Sbjct: 1504 tatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttca 1563 Query: 91 tctttgccatccaacctatgccgccatttctcctttgcagagatcaaggctgcaacgaag 150 || ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 1564 tcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaac 1623 Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagt 197 ||||| || || || | |||||||||| ||||| ||||||||||| Sbjct: 1624 aacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagt 1670
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 31 tatggcaattcacacacttcaagctcagacaagtcgcatgctactgggagtattgcttca 90 |||||||| |||||| | || |||||| ||| || ||| |||||||||| |||||| Sbjct: 32456867 tatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttca 32456926 Query: 91 tctttgccatccaacctatgccgccatttctcctttgcagagatcaaggctgcaacgaag 150 || ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 32456927 tcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaac 32456986 Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagt 197 ||||| || || || | |||||||||| ||||| ||||||||||| Sbjct: 32456987 aacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagt 32457033
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 31 tatggcaattcacacacttcaagctcagacaagtcgcatgctactgggagtattgcttca 90 |||||||| |||||| | || |||||| ||| || ||| |||||||||| |||||| Sbjct: 44388 tatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttca 44447 Query: 91 tctttgccatccaacctatgccgccatttctcctttgcagagatcaaggctgcaacgaag 150 || ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 44448 tcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaac 44507 Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagt 197 ||||| || || || | |||||||||| ||||| ||||||||||| Sbjct: 44508 aacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagt 44554
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 31 tatggcaattcacacacttcaagctcagacaagtcgcatgctactgggagtattgcttca 90 |||||||| |||||| | || |||||| ||| || ||| |||||||||| |||||| Sbjct: 136364 tatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttca 136423 Query: 91 tctttgccatccaacctatgccgccatttctcctttgcagagatcaaggctgcaacgaag 150 || ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 136424 tcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaac 136483 Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagt 197 ||||| || || || | |||||||||| ||||| ||||||||||| Sbjct: 136484 aacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagt 136530
>dbj|AK105465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A03, full insert sequence Length = 1761 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 31 tatggcaattcacacacttcaagctcagacaagtcgcatgctactgggagtattgcttca 90 |||||||| |||||| | || |||||| ||| || ||| |||||||||| |||||| Sbjct: 317 tatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttca 376 Query: 91 tctttgccatccaacctatgccgccatttctcctttgcagagatcaaggctgcaacgaag 150 || ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 377 tcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaac 436 Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagt 197 ||||| || || || | |||||||||| ||||| ||||||||||| Sbjct: 437 aacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagt 483
>dbj|AK101775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064M23, full insert sequence Length = 3155 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 31 tatggcaattcacacacttcaagctcagacaagtcgcatgctactgggagtattgcttca 90 |||||||| |||||| | || |||||| ||| || ||| |||||||||| |||||| Sbjct: 1734 tatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttca 1793 Query: 91 tctttgccatccaacctatgccgccatttctcctttgcagagatcaaggctgcaacgaag 150 || ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || Sbjct: 1794 tcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaac 1853 Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagt 197 ||||| || || || | |||||||||| ||||| ||||||||||| Sbjct: 1854 aacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagt 1900
>ref|NM_115014.2| Arabidopsis thaliana kinase AT3G51550 mRNA, complete cds Length = 3103 Score = 61.9 bits (31), Expect = 9e-07 Identities = 70/83 (84%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| ||||| |||||||| ||||| || || |||||||| ||||| ||| Sbjct: 1683 tgccgtcacttctcgtttgctgagatcaaagctgccactaaaaactttgatgagtcccgg 1742 Query: 169 atccttggtgttggtgggttcgg 191 | |||||||||||||| ||||| Sbjct: 1743 gtgcttggtgttggtggtttcgg 1765
>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13 Length = 94349 Score = 61.9 bits (31), Expect = 9e-07 Identities = 70/83 (84%) Strand = Plus / Minus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| ||||| |||||||| ||||| || || |||||||| ||||| ||| Sbjct: 64725 tgccgtcacttctcgtttgctgagatcaaagctgccactaaaaactttgatgagtcccgg 64666 Query: 169 atccttggtgttggtgggttcgg 191 | |||||||||||||| ||||| Sbjct: 64665 gtgcttggtgttggtggtttcgg 64643
>emb|AL132968.1|ATT18N14 Arabidopsis thaliana DNA chromosome 3, BAC clone T18N14 Length = 79867 Score = 61.9 bits (31), Expect = 9e-07 Identities = 70/83 (84%) Strand = Plus / Minus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| ||||| |||||||| ||||| || || |||||||| ||||| ||| Sbjct: 204 tgccgtcacttctcgtttgctgagatcaaagctgccactaaaaactttgatgagtcccgg 145 Query: 169 atccttggtgttggtgggttcgg 191 | |||||||||||||| ||||| Sbjct: 144 gtgcttggtgttggtggtttcgg 122
>emb|BX824707.1|CNS0A7VC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2955 Score = 61.9 bits (31), Expect = 9e-07 Identities = 70/83 (84%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| ||||| |||||||| ||||| || || |||||||| ||||| ||| Sbjct: 1602 tgccgtcacttctcgtttgctgagatcaaagctgccactaaaaactttgatgagtcccgg 1661 Query: 169 atccttggtgttggtgggttcgg 191 | |||||||||||||| ||||| Sbjct: 1662 gtgcttggtgttggtggtttcgg 1684
>emb|AJ242671.1|ATH242671 Arabidopsis thaliana mRNA for putative serine threonine kinase (aak1 gene) Length = 1628 Score = 61.9 bits (31), Expect = 9e-07 Identities = 70/83 (84%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| ||||| |||||||| ||||| || || |||||||| ||||| ||| Sbjct: 280 tgccgtcacttctcgtttgctgagatcaaagctgccactaaaaactttgatgagtcccgg 339 Query: 169 atccttggtgttggtgggttcgg 191 | |||||||||||||| ||||| Sbjct: 340 gtgcttggtgttggtggtttcgg 362
>ref|XM_476281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2610 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| |||| |||||||||| | ||||||||||||||||| || |||| | Sbjct: 1543 tgccggcacttctcatttggagagatcaagtcagcaacgaagaactttgatgaatcactg 1602 Query: 169 atccttggtgttggtgggtt 188 | |||| ||||||||||| Sbjct: 1603 gtgattggagttggtgggtt 1622
>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12, complete sequence Length = 139627 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| |||| |||||||||| | ||||||||||||||||| || |||| | Sbjct: 134235 tgccggcacttctcatttggagagatcaagtcagcaacgaagaactttgatgaatcactg 134176 Query: 169 atccttggtgttggtgggtt 188 | |||| ||||||||||| Sbjct: 134175 gtgattggagttggtgggtt 134156
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| |||| |||||||||| | ||||||||||||||||| || |||| | Sbjct: 15440 tgccggcacttctcatttggagagatcaagtcagcaacgaagaactttgatgaatcactg 15381 Query: 169 atccttggtgttggtgggtt 188 | |||| ||||||||||| Sbjct: 15380 gtgattggagttggtgggtt 15361
>gb|AY035053.1| Arabidopsis thaliana putative receptor-protein kinase (At3g51550) mRNA, complete cds Length = 3083 Score = 56.0 bits (28), Expect = 5e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| ||||| |||||||| ||||| || || |||||||| ||||| ||| Sbjct: 1666 tgccgtcacttctcgtttgctgagatcaaagctgccactaaaaactttgatgagtcccgg 1725 Query: 169 atccttggtgttggtg 184 | ||||||||||||| Sbjct: 1726 gtgcttggtgttggtg 1741
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| |||| |||||||||| | ||||||||||||||||| || |||| | Sbjct: 11689800 tgccggcacttctcatttggagagatcaagtcagcaacgaagaactttgatgaatcactg 11689741 Query: 169 atccttggtgttggtgggtt 188 | |||| ||||||||||| Sbjct: 11689740 gtgattggagttggtgggtt 11689721
>dbj|AK121335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119L07, full insert sequence Length = 3171 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| |||| |||||||||| | ||||||||||||||||| || |||| | Sbjct: 1705 tgccggcacttctcatttggagagatcaagtcagcaacgaagaactttgatgaatcactg 1764 Query: 169 atccttggtgttggtgggtt 188 | |||| ||||||||||| Sbjct: 1765 gtgattggagttggtgggtt 1784
>dbj|AK100616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B08, full insert sequence Length = 2441 Score = 56.0 bits (28), Expect = 5e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 109 tgccgccatttctcctttgcagagatcaaggctgcaacgaagaactttgacgagtcacgg 168 ||||| || ||||| |||| |||||||||| | ||||||||||||||||| || |||| | Sbjct: 1180 tgccggcacttctcatttggagagatcaagtcagcaacgaagaactttgatgaatcactg 1239 Query: 169 atccttggtgttggtgggtt 188 | |||| ||||||||||| Sbjct: 1240 gtgattggagttggtgggtt 1259
>gb|AY107387.1| Zea mays PCO149313 mRNA sequence Length = 1336 Score = 52.0 bits (26), Expect = 8e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 151 aactttgacgagtcacggatccttggtgttggtgggttcggtaaagttcaccagggagag 210 |||||||| ||||| | || |||||||| ||||| || ||||||||| | | || ||| Sbjct: 16 aactttgatgagtcccttattcttggtgtgggtggatttggtaaagtttatcgtggtgag 75 Query: 211 atcgatgggggctcaactaaggtggctatcaagc 244 | |||||||| ||||||||||||||||||||| Sbjct: 76 gttgatgggggaacaactaaggtggctatcaagc 109
>dbj|AB088042.1| Vibrio parahaemolyticus genes for probable two-component response regulator, probable two-component system sensor kinase, probable ferrisiderophore receptor, probable TolR protein, probable ExbB2 protein, probable ExbD2 protein, probable TonB2 protein, hypothetical proteins, complete cds Length = 9995 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 6 tggtggttggctgccgttgtcgctgt 31 |||||||||||||||||||| ||||| Sbjct: 6832 tggtggttggctgccgttgtagctgt 6857
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1 and two CpG islands, complete sequence Length = 65922 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 tcctttgcagagatcaaggctgca 144 ||||||| |||||||||||||||| Sbjct: 42090 tcctttgtagagatcaaggctgca 42113
>emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on chromosome 10 Contains the 5' end of the gene for KIAA0940 protein, a succinate dehydrogenase complex pseudogene, the 5' end of a novel gene (FLJ20445), a nucleolar protein family A member 2 pseudogene 1 (NOLA2P1) and a CpG island, complete sequence Length = 213648 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggcaattcacacacttcaag 53 |||||||||||||||||||| Sbjct: 4226 ggcaattcacacacttcaag 4245
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tggtggttggctgccgttgt 25 |||||||||||||||||||| Sbjct: 149826 tggtggttggctgccgttgt 149845 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,787,721 Number of Sequences: 3902068 Number of extensions: 1787721 Number of successful extensions: 32335 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32225 Number of HSP's gapped (non-prelim): 104 length of query: 244 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 222 effective length of database: 17,147,199,772 effective search space: 3806678349384 effective search space used: 3806678349384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)