ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet07f08 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 37.0 bits (84), Expect = 0.018 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%) Frame = +2 Query: 284 LSESLPANLG-LSKVSYLALANNKLTGPIPPS 376 LS S+P++L L K+ YL L+ NKLTGPIP S Sbjct: 155 LSGSIPSSLSSLRKLEYLELSRNKLTGPIPES 186
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 36.2 bits (82), Expect = 0.031 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 1/127 (0%) Frame = +2 Query: 8 LPDLALFQASSNNFGGEVPILTGLSYMYMLDVHNKQGDQFEEAKSGTATTHLTQLCLGKN 187 L +L + SSN+F G P L L + +L+V+ A + ++ L N Sbjct: 133 LSNLEVLDLSSNDFSGLFPSLINLPSLRVLNVYENSFHGLIPASLCNNLPRIREIDLAMN 192 Query: 188 FCPGIRLRPILKPKHPRHGATSAKAXXXXXXQLSESLPANL-GLSKVSYLALANNKLTGP 364 + G I +S + LS S+P L LS +S LAL NN+L+G Sbjct: 193 YFDGSIPVGI-------GNCSSVEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSGA 245 Query: 365 IPPSIAQ 385 + + + Sbjct: 246 LSSKLGK 252 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +2 Query: 242 GATSAKAXXXXXXQLSESLPANL-GLSKVSYLALANNKLTGPIPPSI 379 G TS + LS ++P +L LS +S ++A NKL+GPIP + Sbjct: 579 GMTSLEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIPTGV 625
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 32.3 bits (72), Expect = 0.45 Identities = 33/139 (23%), Positives = 53/139 (38%) Frame = +2 Query: 2 DELPDLALFQASSNNFGGEVPILTGLSYMYMLDVHNKQGDQFEEAKSGTATTHLTQLCLG 181 DE P L++ + NN GE+P+ S + L ++ ++ T +T L Sbjct: 183 DEFPGLSILHLAFNNLEGELPMSLAGSQVQSLWLNGQK-----------LTGDITVL--- 228 Query: 182 KNFCPGIRLRPILKPKHPRHGATSAKAXXXXXXQLSESLPANLGLSKVSYLALANNKLTG 361 T K + S LP GL ++ L+L +N TG Sbjct: 229 -------------------QNMTGLKEVWLHSNKFSGPLPDFSGLKELESLSLRDNSFTG 269 Query: 362 PIPPSIAQAQDSLLEVVLL 418 P+P S+ + L+VV L Sbjct: 270 PVPASLLSLES--LKVVNL 286
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 31.6 bits (70), Expect = 0.78 Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 9/139 (6%) Frame = +2 Query: 5 ELPDLA------LFQASSNNFGGEVPILTGLSYMYMLDVHNKQGDQFEEAKSGTATTHLT 166 E+PDL+ +F S N G +P G + + + E S + T+LT Sbjct: 572 EMPDLSFLQHHGIFDLSYNRLSGPIPEELGECLVLVEISLSNNHLSGEIPASLSRLTNLT 631 Query: 167 QLCLGKNFCPGIRLRPILKPKHPRHGATSAK--AXXXXXXQLSESLPANLGL-SKVSYLA 337 L L N G P+ S K QL+ +P + GL + L Sbjct: 632 ILDLSGNALTG---------SIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLN 682 Query: 338 LANNKLTGPIPPSIAQAQD 394 L NKL GP+P S+ ++ Sbjct: 683 LTKNKLDGPVPASLGNLKE 701 Score = 30.4 bits (67), Expect = 1.7 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 3/128 (2%) Frame = +2 Query: 5 ELPDLALFQASSNNFGGEVP--ILTGLSYMYMLDVHNKQGDQFEEAKSGTATTHLTQLCL 178 +LP +AL SNNF GE+P + + M +N+ + + A+ G A + L +L L Sbjct: 423 KLPLMAL-DLDSNNFTGEIPKSLWKSTNLMEFTASYNRL-EGYLPAEIGNAAS-LKRLVL 479 Query: 179 GKNFCPGIRLRPILKPKHPRHGATSAKAXXXXXXQLSESLPANLG-LSKVSYLALANNKL 355 N G R I K TS +P LG + ++ L L +N L Sbjct: 480 SDNQLTGEIPREIGK-------LTSLSVLNLNANMFQGKIPVELGDCTSLTTLDLGSNNL 532 Query: 356 TGPIPPSI 379 G IP I Sbjct: 533 QGQIPDKI 540
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 31.2 bits (69), Expect = 1.0 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 3/134 (2%) Frame = +2 Query: 2 DELPDLALFQASSNNFGGEVP-ILTGLSYMYMLDVHNKQGDQFEEAKSGTATTHLTQLCL 178 D L + S NNF G +P L+ S++ LD+ N + L L L Sbjct: 274 DTCRSLQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPFPNTILRSFGSLQILLL 333 Query: 179 GKNFCPGIRLRPILKPKHPRHGATSAKAXXXXXXQLSESLPANL--GLSKVSYLALANNK 352 N G I K S + + S +P +L G + + L L +N Sbjct: 334 SNNLISGDFPTSISACK-------SLRIADFSSNRFSGVIPPDLCPGAASLEELRLPDNL 386 Query: 353 LTGPIPPSIAQAQD 394 +TG IPP+I+Q + Sbjct: 387 VTGEIPPAISQCSE 400 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +2 Query: 281 QLSESLPANLG-LSKVSYLALANNKLTGPIPPSIAQ 385 +L+ +P + G LS+++ L L NN TG IPP + + Sbjct: 482 RLTGEVPKDFGILSRLAVLQLGNNNFTGEIPPELGK 517
>HIS81_THIDA (Q3SK85) Histidinol-phosphate aminotransferase 1 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 1) Length = 384 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = +2 Query: 296 LPANLGLSKVSYLALANNKLT-GPIPPSIAQAQDSLLEVVL 415 L LGL++ + LA+N+ GP P ++A AQD+LL++ L Sbjct: 31 LARELGLAEADIVKLASNENPLGPSPFALAAAQDALLDMAL 71
>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)| (DEAH box protein 57) Length = 1388 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +1 Query: 220 EAEAPPPWCHECQGTPAQQQPVIGVASCQPW 312 E E P C E QG PA Q+P+ + C PW Sbjct: 135 EEEDSEPQCGEEQGWPAGQEPIF-LPDCSPW 164
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 30.4 bits (67), Expect = 1.7 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 22/159 (13%) Frame = +2 Query: 8 LPDLALFQASSNNFGGEVPILTGLSY--MYMLDV-HNKQGDQFEEAKSGTATTHLTQLCL 178 L LAL SSNNF GE+P+ T L + +LD+ N+ + E+ + + + LT Sbjct: 342 LESLAL---SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 398 Query: 179 GKNFCPGIRLRPILKPKHPRH------------------GATSAKAXXXXXXQLSESLPA 304 NF I PK+ + + LS ++P+ Sbjct: 399 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 458 Query: 305 NLG-LSKVSYLALANNKLTGPIPPSIAQAQDSLLEVVLL 418 +LG LSK+ L L N L G IP + + LE ++L Sbjct: 459 SLGSLSKLRDLKLWLNMLEGEIPQELMYVK--TLETLIL 495
>MUTL_ECOLI (P23367) DNA mismatch repair protein mutL| Length = 615 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = +1 Query: 103 PQQAG*SI*RS*KWNSNNTFNSTMSREELLPGYTPSPHFEAEAPPPWCHECQGTPAQQQP 282 PQ A SI + N F +RE + P YTP+P + PW + G QQ Sbjct: 344 PQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGE 403 Query: 283 V 285 V Sbjct: 404 V 404
>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 582 Score = 30.4 bits (67), Expect = 1.7 Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 2/77 (2%) Frame = +1 Query: 190 LPGYTPSPHFEAEAPPPWCHECQGTP-AQQQPVIGVASCQPWL-IKGELPRPRQQQAHRA 363 +P T SP PPP Q P A +QP + A P L IK P P + Q Sbjct: 91 IPVVTNSPQ-PLPPPPPLPAAAQPLPLAPRQPALVGA---PGLSIKEPAPLPSRPQVPTP 146 Query: 364 NPAVNRASARLPPRGSP 414 P + + A +PP GSP Sbjct: 147 APLLPDSKATIPPNGSP 163
>CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 2145 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 1/30 (3%) Frame = +2 Query: 290 ESLPANLG-LSKVSYLALANNKLTGPIPPS 376 +SLP N+G ++ + L + NN+L+G +PPS Sbjct: 908 QSLPDNVGQMTSLERLVITNNELSGSLPPS 937
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 30.4 bits (67), Expect = 1.7 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +2 Query: 89 YMLDVHNKQGDQFEEAKSGTATTHLTQLCLGKNFCPGIRL 208 + +V++K+ D FE K+G A ++ C CP + L Sbjct: 137 FKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTL 176
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = +2 Query: 296 LPANLG-LSKVSYLALANNKLTGPIP 370 LP +LG LS +S L ++NN LTGPIP Sbjct: 703 LPGSLGGLSFLSDLDVSNNNLTGPIP 728 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +2 Query: 284 LSESLPANLG-LSKVSYLALANNKLTGPIPPSIAQAQD 394 L+ +P +G L K++ L L NN LTG IP + ++ Sbjct: 511 LTGEIPVGIGKLEKLAILQLGNNSLTGNIPSELGNCKN 548
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = +2 Query: 296 LPANLG-LSKVSYLALANNKLTGPIP 370 LP +LG LS +S L ++NN LTGPIP Sbjct: 703 LPGSLGSLSFLSDLDVSNNNLTGPIP 728 Score = 28.9 bits (63), Expect = 5.0 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +2 Query: 281 QLSESLPANLG-LSKVSYLALANNKLTGPIPPSIAQAQ 391 +L+ +P+ +G LSK++ L L NN L+G +P + + Sbjct: 510 RLTGKIPSGIGNLSKLAILQLGNNSLSGNVPRQLGNCK 547
>TNFC_MOUSE (P41155) Lymphotoxin-beta (LT-beta) (Tumor necrosis factor C)| (TNF-C) (Tumor necrosis factor ligand superfamily member 3) Length = 306 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -3 Query: 338 GRGSSPLISQGWQEATPITGCC*AGVPWHSWHHGGGASASKWGEGVY 198 GRGS L+ +G + TP+ G W++ GG + + GE VY Sbjct: 236 GRGSPELLLEGAETVTPVVDPIGYGSLWYTSVGFGGLAQLRSGERVY 282
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 29.3 bits (64), Expect = 3.8 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 17/147 (11%) Frame = +2 Query: 5 ELPDLALFQASSNNFGGEVPI-LTGLSYMYMLDVHNKQGD----QFEEAKSGTATTHLTQ 169 ++ L Q NN GE+P+ +T L + L ++ Q A S LT+ Sbjct: 378 KIQSLQSLQLYQNNLSGELPVDMTELKQLVSLALYENHFTGVIPQDLGANSSLEVLDLTR 437 Query: 170 LC----LGKNFCPGIRLRPILKPKHPRHGATSAKAXXXXXXQ--------LSESLPANLG 313 + N C +L+ +L + G+ + + L LP + Sbjct: 438 NMFTGHIPPNLCSQKKLKRLLLGYNYLEGSVPSDLGGCSTLERLILEENNLRGGLPDFVE 497 Query: 314 LSKVSYLALANNKLTGPIPPSIAQAQD 394 + + L+ N TGPIPPS+ ++ Sbjct: 498 KQNLLFFDLSGNNFTGPIPPSLGNLKN 524
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 28.9 bits (63), Expect = 5.0 Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 3/128 (2%) Frame = +2 Query: 8 LPDLALFQASSNNFGGEVPILTGLSYMYMLDVHNKQGDQFEEA--KSGTATTHLTQLCLG 181 LP L SSNN G +P M L V Q + F+ S + + L L L Sbjct: 400 LPKLETLDMSSNNLTGIIPSGICKDPMNNLKVLYLQNNLFKGPIPDSLSNCSQLVSLDLS 459 Query: 182 KNFCPGIRLRPILKPKHPRHGATSAKAXXXXXXQLSESLPANLG-LSKVSYLALANNKLT 358 N+ G + + K QLS +P L L + L L N LT Sbjct: 460 FNYLTGSIPSSL-------GSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLT 512 Query: 359 GPIPPSIA 382 GPIP S++ Sbjct: 513 GPIPASLS 520
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 28.9 bits (63), Expect = 5.0 Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 2/127 (1%) Frame = +2 Query: 5 ELPDLALFQASSNNFGGEVPI-LTGLSYMYMLDVHNKQGDQFEEAKSGTATTHLTQLCLG 181 +L LA+ + N GE+P LT L + L++ A G+ L+++ LG Sbjct: 157 KLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKM-LSRVLLG 215 Query: 182 KNFCPGIRLRPILKPKHPRHGATSAKAXXXXXXQLSESLPANLGLSKV-SYLALANNKLT 358 +N G I G + +P +G KV S L L N LT Sbjct: 216 RNELTGSIPESI-------SGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLT 268 Query: 359 GPIPPSI 379 GPIP S+ Sbjct: 269 GPIPGSL 275
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 28.9 bits (63), Expect = 5.0 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Frame = +1 Query: 196 GYTPSPH-FEAEAPPPWCHECQGTPAQQQPVIGVASCQPWLIKGELPRPRQQQAHRANPA 372 G P+P E EAP P +G P G A P +GE P P + +A PA Sbjct: 246 GEAPAPAPAEGEAPAP--APAEGEAPAPAPAEGEAPA-PAPAEGEAPAPAEGEAPAPAPA 302 Query: 373 VNRASARLPPRG 408 A A P G Sbjct: 303 EGEAPAPAPAEG 314
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 28.9 bits (63), Expect = 5.0 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = +2 Query: 296 LPANLG-LSKVSYLALANNKLTGPIPPSIAQ 385 +P+ LG L+++ L LA L GPIPPS+++ Sbjct: 204 IPSQLGNLTELQVLWLAGCNLVGPIPPSLSR 234
>SYTL1_MOUSE (Q99N80) Synaptotagmin-like protein 1 (Exophilin-7)| Length = 567 Score = 28.9 bits (63), Expect = 5.0 Identities = 20/75 (26%), Positives = 34/75 (45%) Frame = +1 Query: 184 ELLPGYTPSPHFEAEAPPPWCHECQGTPAQQQPVIGVASCQPWLIKGELPRPRQQQAHRA 363 +L Y PS E + P HEC+ A + + VA P L P + +Q + Sbjct: 157 DLSSPYVPSKASEGQEEEPQDHECE-LEAPGEGGVQVAEADPELD----PEQKAEQESQP 211 Query: 364 NPAVNRASARLPPRG 408 PA ++A++++ G Sbjct: 212 TPAQSKATSKILENG 226
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 28.9 bits (63), Expect = 5.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 208 SPHFEAEAPPPWCHECQGTPAQQQP 282 +P EAP P CQ +PAQQ+P Sbjct: 570 APRAPPEAPHPGKRSCQKSPAQQEP 594
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 28.9 bits (63), Expect = 5.0 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 281 QLSESLPANLGLSKVSYLALANNKLTGPIPPSIAQAQDSLLEV 409 +L+ +PA L + L L+ N+LTGPIP AQ + + +++ Sbjct: 179 KLTGCIPAGLVQGQFRSLILSYNQLTGPIPRDDAQDEINTVDL 221
>PO2F1_MOUSE (P25425) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 770 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +1 Query: 262 TPAQQQPVIGVASCQPWLIKGELPRPRQQQAHRANPAVNRASARLP 399 TPAQQQ ++ A Q L+ + + Q H A A ASA P Sbjct: 116 TPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATP 161
>PO2F1_HUMAN (P14859) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 743 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +1 Query: 262 TPAQQQPVIGVASCQPWLIKGELPRPRQQQAHRANPAVNRASARLP 399 TPAQQQ ++ A Q L+ + + Q H A A ASA P Sbjct: 115 TPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATP 160
>EPS8_PONPY (Q5R4H4) Epidermal growth factor receptor kinase substrate 8| Length = 822 Score = 28.5 bits (62), Expect = 6.6 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Frame = +1 Query: 193 PGYTPSPHFEAEAPPPWCHECQGTPAQQQPVIGVASCQPWLI-KGELPRPRQQQAHRANP 369 PG P P A APP GT Q VA+ W +G+ +PRQ P Sbjct: 207 PGIPPPPRAPAPAPP-------GTVTQVDVRSRVAAWSAWAADQGDFEKPRQYHEQEETP 259 Query: 370 AVNRA 384 + A Sbjct: 260 EMMAA 264
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +1 Query: 205 PSPHFEAEAPPPWCHECQGTPAQQ--QPVIGVASCQP 309 PSP P P+CH QG+ Q+ P VA C P Sbjct: 7022 PSPDSPWGQPAPFCHPKQGSAPQEGCSPHPAVAPCPP 7058
>PO2F1_PIG (Q29076) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 745 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +1 Query: 262 TPAQQQPVIGVASCQPWLIKGELPRPRQQQAHRANPAVNRASARLP 399 TPAQQQ ++ A Q L+ + + Q H A A ASA P Sbjct: 115 TPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATP 160
>PO2F1_RAT (P31503) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (Fragment) Length = 632 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +1 Query: 262 TPAQQQPVIGVASCQPWLIKGELPRPRQQQAHRANPAVNRASARLP 399 TPAQQQ ++ A Q L+ + + Q H A A ASA P Sbjct: 2 TPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATP 47
>MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1| Length = 1319 Score = 28.5 bits (62), Expect = 6.6 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Frame = +1 Query: 226 EAPPPWCHECQGTPAQQQP------VIGVASCQPWLIKGELPRPRQQQAHRANPAVNRAS 387 +APPP + P QQQP ++ SC P LPRP+Q +A + + Sbjct: 342 QAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPP-----ALPRPQQGEAGTPSGGLQDGG 396 Query: 388 ARLP 399 LP Sbjct: 397 PMLP 400
>MUTL_ECO57 (Q8XDN4) DNA mismatch repair protein mutL| Length = 615 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1 Query: 154 NTFNSTMSREELLPGYTPSPHFEAEAPPPWCHECQGTPAQQQPV 285 N F RE + P YTP+P + PW + G QQ V Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEV 404
>HUTU_STRAW (Q82HL2) Urocanate hydratase (EC 4.2.1.49) (Urocanase)| (Imidazolonepropionate hydrolase) Length = 554 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -3 Query: 269 AGVPWHSWHHGGGASASKWGEGVYPGKSSSRDIVEL 162 +G W S HHGGG G ++ G+ S D EL Sbjct: 475 SGASWVSIHHGGGVG---MGRSIHAGQVSVADGTEL 507
>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 262 Score = 28.1 bits (61), Expect = 8.6 Identities = 23/82 (28%), Positives = 33/82 (40%) Frame = +1 Query: 169 TMSREELLPGYTPSPHFEAEAPPPWCHECQGTPAQQQPVIGVASCQPWLIKGELPRPRQQ 348 T+ ++E +P P+P PP PA P + ++ P L + P P Sbjct: 124 TIRKKEAMPQPPPAPQPSVVYSPP-------PPALPPPPVPASTPAPTLARAT-PTPTSA 175 Query: 349 QAHRANPAVNRASARLPPRGSP 414 PAV A + LPP SP Sbjct: 176 ------PAVKSAKSSLPPLKSP 191
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +1 Query: 328 LPRPRQQQAHRANPAVNRASARLPPRGSP 414 LP R+ ++ + +PA RA+ RL P GSP Sbjct: 811 LPPARRPRSLQESPAPRRAAGRLGPPGSP 839
>PTPA2_NEUCR (Q7SEF9) Serine/threonine-protein phosphatase 2A activator 2 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2) (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl phosphatase activator 2) Length = 449 Score = 28.1 bits (61), Expect = 8.6 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = +1 Query: 256 QGTPAQQ-QPVIGVASCQPWLIKGELPR--PRQQQAHRANPAVNRASARLPPRGSPS 417 QG+PA QP+ P L + +P+ PR+++ +NP + LPPR PS Sbjct: 16 QGSPAASGQPISKAGQAIPNL-RDRIPKLEPRRRKQEPSNPTPVPETPALPPRPDPS 71
>VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)| Length = 382 Score = 28.1 bits (61), Expect = 8.6 Identities = 22/84 (26%), Positives = 31/84 (36%) Frame = +1 Query: 163 NSTMSREELLPGYTPSPHFEAEAPPPWCHECQGTPAQQQPVIGVASCQPWLIKGELPRPR 342 N S E L G P P APP W + +P + + Q + EL Sbjct: 103 NGMASALEALEGGGPLPPPPPTAPPTWSAQNGPSPEEMEQ-------QKRQQQSELMERE 155 Query: 343 QQQAHRANPAVNRASARLPPRGSP 414 ++ ++ P A A PP G P Sbjct: 156 RRASNAGGPPAASAGAPPPPPGPP 179
>SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4| Length = 385 Score = 28.1 bits (61), Expect = 8.6 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 2/81 (2%) Frame = +1 Query: 181 EELLPG-YTPSPHFEAEAPPPWCHECQGTPAQQ-QPVIGVASCQPWLIKGELPRPRQQQA 354 + LLPG PSP + H G P Q+ P G+AS P G + P A Sbjct: 174 QPLLPGAMEPSPRAQG-------HPSMGGPMQRVTPPRGMASVGPQSYGGGMRPPPNSLA 226 Query: 355 HRANPAVNRASARLPPRGSPS 417 PA+N P SPS Sbjct: 227 GPGLPAMNMGPGVRGPWASPS 247
>GAG_MLVHO (P21435) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30; Nucleoprotein p10] Length = 539 Score = 28.1 bits (61), Expect = 8.6 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 33/124 (26%) Frame = +1 Query: 142 WNSNNTFNSTMSREELLPGYTPSPH-----------FEAEA--PPPWC------------ 246 W + TFN + + + ++P PH +EA A PPPW Sbjct: 49 WPQDGTFNKDIITQVKIKVFSPGPHGHPDQVPYIVTWEAIAYDPPPWAKPFVHPQLSVSP 108 Query: 247 -------HECQGTPAQQQPVIGVASCQPWLIKGELPRPRQQ-QAHRANPAVNRASARLPP 402 HE G P + +S P L + P P+ Q + P ++ S PP Sbjct: 109 SAPSAFSHEVSGPPTR-------SSLYPALTPTKSPSPKTQVLSDDGGPLIDLLSDDPPP 161 Query: 403 RGSP 414 P Sbjct: 162 YRGP 165
>SYLM_MOUSE (Q8VDC0) Probable leucyl-tRNA synthetase, mitochondrial precursor| (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS) Length = 902 Score = 28.1 bits (61), Expect = 8.6 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +2 Query: 323 VSYLALANNKLTG--PIPPSIAQAQDSLLEVVL 415 V L NNK G P+P +AQ QD + E+VL Sbjct: 838 VQMAVLINNKACGKIPVPQHVAQDQDKVHELVL 870
>SACS_MOUSE (Q9JLC8) Sacsin| Length = 3830 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/47 (27%), Positives = 21/47 (44%) Frame = +2 Query: 92 MLDVHNKQGDQFEEAKSGTATTHLTQLCLGKNFCPGIRLRPILKPKH 232 +L+++ D E K + GKNFCP + ++KP H Sbjct: 502 LLEIYGFMHDHLSEGKDSFKALKFPWVWTGKNFCP--LAQAVIKPTH 546
>RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40)| Length = 310 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = -3 Query: 317 ISQGWQEATPITGCC*AGVPWHSWHHGGGASASKWGEGVYP 195 I Q W +A P GV W + A+ WGE V P Sbjct: 250 IDQSWSDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPP 290
>TMM_ARATH (Q9SSD1) TOO MANY MOUTHS protein precursor (TMM)| Length = 496 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +2 Query: 281 QLSESLPANLGLSKVSYLALANNKLTGPIPPSIAQAQDSLLEVVL 415 +L+ S+P + L +S L L N LTGP+PP++ SL+++ L Sbjct: 218 RLTGSIPGFV-LPALSVLDLNQNLLTGPVPPTLTSC-GSLIKIDL 260 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,520,467 Number of Sequences: 219361 Number of extensions: 1270734 Number of successful extensions: 4077 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3832 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4058 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
