>FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat|
           protein 6) (F-box protein FBL6) (FBL6A)
          Length = 539

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
 Frame = +2

Query: 47  PQCV*RPHSASRPAPAQATAGTMEALPE---GDDLLSEILVRL--------PPQPSSLPR 193
           P+   R  +A+ PAPA A   T E  P+   GD +  EILV++         P P  L R
Sbjct: 81  PKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEILVQIFGLLVAADGPMPF-LGR 139

Query: 194 ASAVCSRWRSLLTDPAXXXXXXXXXXXXSAPLLG 295
           A+ VC RW+   + PA            S+PL+G
Sbjct: 140 AARVCRRWQEAASQPA-----LWHTVTLSSPLVG 168

>YMW3_YEAST (Q04772) Hypothetical 23.2 kDa protein in ABF2-CHL12 intergenic|
           region
          Length = 201

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
 Frame = +2

Query: 278 SAPLLGFFVVHRGVAFHPALDAP--------DRLPLGRFRLRLDDGYIALGW 409
           S P + F    R    HPA+ +P         R PL R ++RLD G+ AL W
Sbjct: 13  SKPNVRFAAPQRLSVAHPAISSPLHMPMSKSSRKPLVRTKIRLDPGHSALDW 64

>AMS2_SCHPO (Q9URT4) CENP-A multicopy suppressor protein 2|
          Length = 697

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = +2

Query: 71  SASRPAPAQATAGTMEALP------EGDDLLSEILVRLPPQPSSLPRASAVCSRWRS--L 226
           + ++P P      T   LP      E DDL  E   R PP+P++L +     S WRS   
Sbjct: 551 TTTKPMPKVNKEETEPTLPVCDSEKENDDL--ECYFRTPPKPTTLQKQQQSPSPWRSELF 608

Query: 227 LTDP 238
           L+DP
Sbjct: 609 LSDP 612

>FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)|
          Length = 286

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 77  SRPAPAQATAGTMEALPE-GDDLLSEILVRLPPQPSSLPRASAVCSRWRSLLTDPA 241
           +RP+  Q T     AL +   +LL ++L  +PP+ + + R   VC  WR L+  P+
Sbjct: 3   ARPSRRQMTEARRLALTKLPPELLVQVLSHVPPR-ALVTRCRPVCRAWRDLVDGPS 57

>SELV_HUMAN (P59797) Selenoprotein V|
          Length = 346

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5   RRSSDLQTNRLVLTPQCV*RPHSASRPAPAQATAGTMEALPEGDDLLSEIL-VRLPPQPS 181
           R  + + T    LTP     P     PAPAQ  AG   ALP  D  L+  L +  PP+P+
Sbjct: 104 RNPTPVPTPARTLTP-----PVRVPAPAPAQLLAGIRAALPVLDSYLAPALPLDPPPEPA 158

>MAB11_COPCI (P40333) Mating-type protein beta1-1|
          Length = 681

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +2

Query: 5   RRSSDLQTNRLVLTPQCV*RPHSASRPAPAQATAGTMEALPEGDDLLSEILVRLPPQPSS 184
           +R   L+++  V +P C  RP S S         G     P   D L E      PQPS 
Sbjct: 365 KRRRSLESDETVSSPLCK-RPRSQSVFCELSPVKGLPSPSPSTQDELLETSAAPSPQPSL 423

Query: 185 LPR 193
           LP+
Sbjct: 424 LPK 426

>FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)|
          Length = 278

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 113 MEALPEGDDLLSEILVRLPPQPSSLPRASAVCSRWRSLLTDP 238
           ++ALP   +LL ++L  +PP+ S + R   VC  WR ++  P
Sbjct: 18  LDALPP--ELLVQVLSHVPPR-SLVTRCRPVCRAWRDIVDGP 56

>FBX33_HUMAN (Q7Z6M2) F-box only protein 33|
          Length = 555

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +2

Query: 62  RPHSASRPAPAQATAGTMEALPEGDDLLSEILVRL---PPQPSSLPRASAVCSRWRSLLT 232
           RP + SR     A  G          L SE++V +    P P  L RASA CS WR  L 
Sbjct: 48  RPGAGSRRRGRMALCGQAAGAAS---LPSELIVHIFSFLPAPDRL-RASASCSHWRECLF 103

Query: 233 DPA 241
            PA
Sbjct: 104 YPA 106

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 430  EEAEPVAPSEGDVAVVEPQAESPEREAVGGVEGRMEGDS 314
            +EAE  A  E D    +P++E  E + V G   + EGD+
Sbjct: 2090 QEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDA 2128

>ZMPB_STRPN (Q9L7Q2) Zinc metalloprotease zmpB precursor (EC 3.4.24.-)|
          Length = 1906

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -1

Query: 430 EEAEPVAPSEGDVAVVEP--QAESPERE 353
           +  EPVAP E + A VEP  Q E+PE E
Sbjct: 280 QAGEPVAPREDEKAPVEPEKQPEAPEEE 307

>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = +2

Query: 74  ASRPAPAQATAGTMEALPEGDDLLSEILVRLPPQPSSLPRASAVCSRWRSLLTDP 238
           ASRP   QA+   ++ LP  D  + +I   LP   + L R + VC RW +L  DP
Sbjct: 104 ASRPQKEQAS---IDRLP--DHSMVQIFSFLPT--NQLCRCARVCRRWYNLAWDP 151

>FBX17_RAT (Q6AY27) F-box only protein 17|
          Length = 250

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 77  SRPAPAQATAGTMEALPE-GDDLLSEILVRLPPQPSSLPRASAVCSRWRSLLTDPA 241
           ++P+  + T     AL E   +LL ++L  +PP+ + + R   VC  WR L+  P+
Sbjct: 3   AQPSRRRMTEAQHMALAELPPELLLQVLSHVPPR-ALVTRCRPVCRAWRDLVDGPS 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.118    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,139,586
Number of Sequences: 219361
Number of extensions: 463843
Number of successful extensions: 1464
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)