ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet07f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1403 Score = 109 bits (55), Expect = 8e-21 Identities = 116/135 (85%), Gaps = 6/135 (4%) Strand = Plus / Plus Query: 170 ccgcagccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctc 229 |||| ||| |||||||||||||||||| ||||||||||| ||||||||| ||||| || Sbjct: 130 ccgcggccctcctccctcccgcgcgccgccgccgtctgcgcgcgctggcgccgcctcgtc 189 Query: 230 accg---acccggccttccgccgccgcttccgcgtccaccaccgccgccgcagcgccccc 286 |||| |||| ||||||| |||||||||||||| |||||| ||||||| |||| ||| Sbjct: 190 accgccgaccccgccttcctccgccgcttccgcgcccacca---ccgccgcggcgcgccc 246 Query: 287 ctcctcggcttcttc 301 ||||||||||||||| Sbjct: 247 ctcctcggcttcttc 261
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 8e-21 Identities = 116/135 (85%), Gaps = 6/135 (4%) Strand = Plus / Minus Query: 170 ccgcagccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctc 229 |||| ||| |||||||||||||||||| ||||||||||| ||||||||| ||||| || Sbjct: 8454906 ccgcggccctcctccctcccgcgcgccgccgccgtctgcgcgcgctggcgccgcctcgtc 8454847 Query: 230 a---ccgacccggccttccgccgccgcttccgcgtccaccaccgccgccgcagcgccccc 286 | ||||||| ||||||| |||||||||||||| |||||| ||||||| |||| ||| Sbjct: 8454846 accgccgaccccgccttcctccgccgcttccgcgcccacca---ccgccgcggcgcgccc 8454790 Query: 287 ctcctcggcttcttc 301 ||||||||||||||| Sbjct: 8454789 ctcctcggcttcttc 8454775 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 202 cgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcg 260 ||||| || |||||||| | ||||| | ||||||||||||||| |||||||||||||| Sbjct: 10861797 cgtctccacccgctggctccgcctcgcctccgacccggccttcctccgccgcttccgcg 10861739 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||| ||||||||||||| ||||||| | || || | ||| ||||||||||| |||| Sbjct: 10853524 cgcgccgccgccgtctgcaggcgctggctccgcgtcgcctccgccccggccttcctccgc 10853583 Query: 251 cgcttccgcgtccaccacc 269 |||| ||||| || ||||| Sbjct: 10853584 cgctaccgcgccctccacc 10853602 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgc 274 ||||||||||||||||||| || ||||||| Sbjct: 9470630 cgccgccgcttccgcgtcccccgccgccgc 9470601 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cgcgtccaccaccgccgccgc 277 ||||||||||||||||||||| Sbjct: 17213035 cgcgtccaccaccgccgccgc 17213015 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cctccctcccgcgcgcctccgccg 203 ||||||||||||||||| |||||| Sbjct: 17375683 cctccctcccgcgcgccgccgccg 17375660
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 109 bits (55), Expect = 8e-21 Identities = 116/135 (85%), Gaps = 6/135 (4%) Strand = Plus / Minus Query: 170 ccgcagccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctc 229 |||| ||| |||||||||||||||||| ||||||||||| ||||||||| ||||| || Sbjct: 107756 ccgcggccctcctccctcccgcgcgccgccgccgtctgcgcgcgctggcgccgcctcgtc 107697 Query: 230 a---ccgacccggccttccgccgccgcttccgcgtccaccaccgccgccgcagcgccccc 286 | ||||||| ||||||| |||||||||||||| |||||| ||||||| |||| ||| Sbjct: 107696 accgccgaccccgccttcctccgccgcttccgcgcccacca---ccgccgcggcgcgccc 107640 Query: 287 ctcctcggcttcttc 301 ||||||||||||||| Sbjct: 107639 ctcctcggcttcttc 107625
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 109 bits (55), Expect = 8e-21 Identities = 116/135 (85%), Gaps = 6/135 (4%) Strand = Plus / Minus Query: 170 ccgcagccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctc 229 |||| ||| |||||||||||||||||| ||||||||||| ||||||||| ||||| || Sbjct: 4176 ccgcggccctcctccctcccgcgcgccgccgccgtctgcgcgcgctggcgccgcctcgtc 4117 Query: 230 a---ccgacccggccttccgccgccgcttccgcgtccaccaccgccgccgcagcgccccc 286 | ||||||| ||||||| |||||||||||||| |||||| ||||||| |||| ||| Sbjct: 4116 accgccgaccccgccttcctccgccgcttccgcgcccacca---ccgccgcggcgcgccc 4060 Query: 287 ctcctcggcttcttc 301 ||||||||||||||| Sbjct: 4059 ctcctcggcttcttc 4045
>dbj|AK106350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H10, full insert sequence Length = 1403 Score = 109 bits (55), Expect = 8e-21 Identities = 116/135 (85%), Gaps = 6/135 (4%) Strand = Plus / Plus Query: 170 ccgcagccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctc 229 |||| ||| |||||||||||||||||| ||||||||||| ||||||||| ||||| || Sbjct: 130 ccgcggccctcctccctcccgcgcgccgccgccgtctgcgcgcgctggcgccgcctcgtc 189 Query: 230 accg---acccggccttccgccgccgcttccgcgtccaccaccgccgccgcagcgccccc 286 |||| |||| ||||||| |||||||||||||| |||||| ||||||| |||| ||| Sbjct: 190 accgccgaccccgccttcctccgccgcttccgcgcccacca---ccgccgcggcgcgccc 246 Query: 287 ctcctcggcttcttc 301 ||||||||||||||| Sbjct: 247 ctcctcggcttcttc 261
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || |||||||||||| | || || || |||| || ||| Sbjct: 71631 ctgccggacgacgacgacctcctctcggagatcctcctccgcctcccgccgcgtccctcc 71572 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 71571 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 71512 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 71511 ttccaccgccgcttccgcgcccgccaccg 71483
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || |||||||||||| | || || || |||| || ||| Sbjct: 14736217 ctgccggacgacgacgacctcctctcggagatcctcctccgcctcccgccgcgtccctcc 14736158 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 14736157 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 14736098 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 14736097 ttccaccgccgcttccgcgcccgccaccg 14736069 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccga 234 ||||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 15892862 cgcgcctccctcgtctgcaaacgctggcgccgcctcctcaccga 15892905
>ref|NM_194792.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029P06.10), mRNA Length = 1248 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || |||| |||||||||||| Sbjct: 405 ggaagacgacgaccttctctccgagatcctcctccgcctcccgccgctgccgtcctccct 464 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| |||||||||| ||||||||||||||||||| | || || ||||||| | ||||| Sbjct: 465 cccccgcgcctccgtcgtctgcagccgctggcgcctcatcgtctccgaccccggcttcct 524 Query: 247 ccgccgcttcc 257 ||||||||||| Sbjct: 525 ccgccgcttcc 535
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || |||| |||||||||||| Sbjct: 73969 ggaagacgacgaccttctctccgagatcctcctccgcctcccgccgctgccgtcctccct 74028 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| |||||||||| ||||||||||||||||||| | || || ||||||| | ||||| Sbjct: 74029 cccccgcgcctccgtcgtctgcagccgctggcgcctcatcgtctccgaccccggcttcct 74088 Query: 247 ccgccgcttcc 257 ||||||||||| Sbjct: 74089 ccgccgcttcc 74099 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || |||||||||||| | || || || |||||||||||||||||||| || Sbjct: 81501 cgacgacctcctctcggagatcctcctccgcctcccgccgcagccgtcctccctccctcg 81560 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctc 229 ||||||| |||||||| |||||||||| |||||||| Sbjct: 81561 cgcctccctcgtctgcacccgctggcgccgcctcctc 81597
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || |||| |||||||||||| Sbjct: 2417237 ggaagacgacgaccttctctccgagatcctcctccgcctcccgccgctgccgtcctccct 2417296 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| |||||||||| ||||||||||||||||||| | || || ||||||| | ||||| Sbjct: 2417297 cccccgcgcctccgtcgtctgcagccgctggcgcctcatcgtctccgaccccggcttcct 2417356 Query: 247 ccgccgcttcc 257 ||||||||||| Sbjct: 2417357 ccgccgcttcc 2417367 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || | ||||||||| | || || || |||| ||| ||| Sbjct: 2271990 ctgccggacgacgacgacctcctcgccgagatcctcctccgcctcccgccgctgccctcc 2271931 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| |||||||||| ||||| |||||||||| ||| Sbjct: 2271930 tcgctcccccgcgcctccctcgtctgcaaccgctggcgccgcctcgtcaccgaccccgcc 2271871 Query: 242 ttccgccgccgcttccgc 259 |||| ||||||||||||| Sbjct: 2271870 ttccaccgccgcttccgc 2271853 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||||||||||||||||||| || Sbjct: 2258400 cgacgacctcctctccgagatcctcctccgcctcccgccgcagccgtcctccctccctcg 2258341 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| ||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 2258340 cgcctccctcgtctgcaagcgctggcgccgcctcgtctccgaccacggcttcctccgccg 2258281 Query: 253 cttccgcgtccaccaccg 270 |||||||| || |||||| Sbjct: 2258280 cttccgcgcccgccaccg 2258263 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || |||||||||||| | || || || |||||||||||||||||||| || Sbjct: 2424769 cgacgacctcctctcggagatcctcctccgcctcccgccgcagccgtcctccctccctcg 2424828 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctc 229 ||||||| |||||||| |||||||||| |||||||| Sbjct: 2424829 cgcctccctcgtctgcacccgctggcgccgcctcctc 2424865 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||| ||| ||||||||||| || Sbjct: 2319086 cgacgacctcctctccgagatcctcctccgcctcccgccgctgccatcctccctcccccg 2319027 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| |||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 2319026 cgcctccctcgtctgcacccgctggcgccgcctcgtctccgaccgcggcttcctccgccg 2318967 Query: 253 cttccgcgtccaccaccgc 271 |||||||| || ||||||| Sbjct: 2318966 cttccgcgcccgccaccgc 2318948 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 2279529 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 2279470 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 2279469 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 2279410 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 2279409 ttccaccgccgcttccgcgcccgccaccg 2279381 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 149 gagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctgc 208 ||||||||| | || || || ||||||||||| ||||||| ||||||||| ||||||| Sbjct: 1458754 gagatcctcctccgcctcccaccgcagccgtcgtccctcctccgcgcctccctcgtctgc 1458813 Query: 209 agccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccaccac 268 | ||||||||| ||||| || ||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 1458814 aagcgctggcgccgcctcgtcgccggcccggtcttcctccgccgcttccgcgcccaccac 1458873 Query: 269 c 269 | Sbjct: 1458874 c 1458874 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 2528583 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 2528642 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 2528643 cacgcccgccgccgccgagctcccctcctcggcttcttc 2528681 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 175 gccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccga 234 ||||||||||||||||||||||||| |||||||| | |||||| || || || |||| Sbjct: 2333410 gccgtcctccctcccgcgcgcctccctcgtctgcaagcagtggcgccgcgtcgtctccga 2333351 Query: 235 cccggccttccgccgccgcttccgcgtccaccac 268 ||||||||||| |||||||| ||||| ||||||| Sbjct: 2333350 cccggccttcctccgccgctaccgcgcccaccac 2333317 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 198 ccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttcc 257 ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 3707170 ccgccgtctgcaggacatggcgcagcctcctcaccgacccggccttcctccgccgctacc 3707229 Query: 258 gcg 260 ||| Sbjct: 3707230 gcg 3707232 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 2224802 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 2224743 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | |||||| ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 2224742 caagcagtggcgccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 2224683 Query: 268 ccg 270 ||| Sbjct: 2224682 ccg 2224680 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || || ||||||||||||| Sbjct: 5719192 ggaagacgacgacctcctctccgagatcctcctccgcctcccggcgaagccgtcctccct 5719251 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| ||||||||| |||||||| || |||||| || || || ||||| | | ||||| Sbjct: 5719252 cccccgcgcctccctcgtctgcaagcggtggcgccgcgtcgtctccgacgccgtcttcct 5719311 Query: 247 ccgccgcttccg 258 ||| |||||||| Sbjct: 5719312 ccggcgcttccg 5719323 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||||||||||||| ||||||||| ||||| | ||| |||| |||||||||||| Sbjct: 3447214 cgcctccgccgtctgcaagcgctggcgccgcctcgccttcgagccgggcttccgccgccg 3447273 Query: 253 cttc 256 |||| Sbjct: 3447274 cttc 3447277 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 333 ccctcgacgcccccgaccgcctcccgc 359 |||||||||||||||||||| |||||| Sbjct: 2566632 ccctcgacgcccccgaccgcgtcccgc 2566658 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcgcctccgccgtctgcagccg 213 |||||||||||||||||||||| Sbjct: 5429146 gcgcctccgccgtctgcagccg 5429167 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 183 ccctcccgcgcgcctccgccgtctgcagccgctggcgc 220 ||||| |||||||| || |||||||| ||||||||||| Sbjct: 5362335 ccctcgcgcgcgccgccaccgtctgccgccgctggcgc 5362298 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 246 gccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| |||| ||| ||||||||||||| Sbjct: 20708169 gccgccgctgccgcttccgccaccgccgccgc 20708138 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 ccaccgccgccgcagcgcccccctcctc 292 ||||||||||||| |||| ||||||||| Sbjct: 18390968 ccaccgccgccgccgcgctcccctcctc 18390941
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || |||| |||||||||||| Sbjct: 2417188 ggaagacgacgaccttctctccgagatcctcctccgcctcccgccgctgccgtcctccct 2417247 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| |||||||||| ||||||||||||||||||| | || || ||||||| | ||||| Sbjct: 2417248 cccccgcgcctccgtcgtctgcagccgctggcgcctcatcgtctccgaccccggcttcct 2417307 Query: 247 ccgccgcttcc 257 ||||||||||| Sbjct: 2417308 ccgccgcttcc 2417318 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || | ||||||||| | || || || |||| ||| ||| Sbjct: 2271941 ctgccggacgacgacgacctcctcgccgagatcctcctccgcctcccgccgctgccctcc 2271882 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| |||||||||| ||||| |||||||||| ||| Sbjct: 2271881 tcgctcccccgcgcctccctcgtctgcaaccgctggcgccgcctcgtcaccgaccccgcc 2271822 Query: 242 ttccgccgccgcttccgc 259 |||| ||||||||||||| Sbjct: 2271821 ttccaccgccgcttccgc 2271804 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||||||||||||||||||| || Sbjct: 2258351 cgacgacctcctctccgagatcctcctccgcctcccgccgcagccgtcctccctccctcg 2258292 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| ||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 2258291 cgcctccctcgtctgcaagcgctggcgccgcctcgtctccgaccacggcttcctccgccg 2258232 Query: 253 cttccgcgtccaccaccg 270 |||||||| || |||||| Sbjct: 2258231 cttccgcgcccgccaccg 2258214 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || |||||||||||| | || || || |||||||||||||||||||| || Sbjct: 2424720 cgacgacctcctctcggagatcctcctccgcctcccgccgcagccgtcctccctccctcg 2424779 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctc 229 ||||||| |||||||| |||||||||| |||||||| Sbjct: 2424780 cgcctccctcgtctgcacccgctggcgccgcctcctc 2424816 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||| ||| ||||||||||| || Sbjct: 2319037 cgacgacctcctctccgagatcctcctccgcctcccgccgctgccatcctccctcccccg 2318978 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| |||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 2318977 cgcctccctcgtctgcacccgctggcgccgcctcgtctccgaccgcggcttcctccgccg 2318918 Query: 253 cttccgcgtccaccaccgc 271 |||||||| || ||||||| Sbjct: 2318917 cttccgcgcccgccaccgc 2318899 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 2279480 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 2279421 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 2279420 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 2279361 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 2279360 ttccaccgccgcttccgcgcccgccaccg 2279332 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 149 gagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctgc 208 ||||||||| | || || || ||||||||||| ||||||| ||||||||| ||||||| Sbjct: 1458751 gagatcctcctccgcctcccaccgcagccgtcgtccctcctccgcgcctccctcgtctgc 1458810 Query: 209 agccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccaccac 268 | ||||||||| ||||| || ||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 1458811 aagcgctggcgccgcctcgtcgccggcccggtcttcctccgccgcttccgcgcccaccac 1458870 Query: 269 c 269 | Sbjct: 1458871 c 1458871 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 2528534 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 2528593 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 2528594 cacgcccgccgccgccgagctcccctcctcggcttcttc 2528632 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 175 gccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccga 234 ||||||||||||||||||||||||| |||||||| | |||||| || || || |||| Sbjct: 2333361 gccgtcctccctcccgcgcgcctccctcgtctgcaagcagtggcgccgcgtcgtctccga 2333302 Query: 235 cccggccttccgccgccgcttccgcgtccaccac 268 ||||||||||| |||||||| ||||| ||||||| Sbjct: 2333301 cccggccttcctccgccgctaccgcgcccaccac 2333268 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 198 ccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttcc 257 ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 3707091 ccgccgtctgcaggacatggcgcagcctcctcaccgacccggccttcctccgccgctacc 3707150 Query: 258 gcg 260 ||| Sbjct: 3707151 gcg 3707153 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 2224753 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 2224694 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | |||||| ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 2224693 caagcagtggcgccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 2224634 Query: 268 ccg 270 ||| Sbjct: 2224633 ccg 2224631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || || ||||||||||||| Sbjct: 5720379 ggaagacgacgacctcctctccgagatcctcctccgcctcccggcgaagccgtcctccct 5720438 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| ||||||||| |||||||| || |||||| || || || ||||| | | ||||| Sbjct: 5720439 cccccgcgcctccctcgtctgcaagcggtggcgccgcgtcgtctccgacgccgtcttcct 5720498 Query: 247 ccgccgcttccg 258 ||| |||||||| Sbjct: 5720499 ccggcgcttccg 5720510 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||||||||||||| ||||||||| ||||| | ||| |||| |||||||||||| Sbjct: 3447135 cgcctccgccgtctgcaagcgctggcgccgcctcgccttcgagccgggcttccgccgccg 3447194 Query: 253 cttc 256 |||| Sbjct: 3447195 cttc 3447198 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 333 ccctcgacgcccccgaccgcctcccgc 359 |||||||||||||||||||| |||||| Sbjct: 2566583 ccctcgacgcccccgaccgcgtcccgc 2566609 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcgcctccgccgtctgcagccg 213 |||||||||||||||||||||| Sbjct: 5429933 gcgcctccgccgtctgcagccg 5429954 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 183 ccctcccgcgcgcctccgccgtctgcagccgctggcgc 220 ||||| |||||||| || |||||||| ||||||||||| Sbjct: 5363122 ccctcgcgcgcgccgccaccgtctgccgccgctggcgc 5363085 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 246 gccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| |||| ||| ||||||||||||| Sbjct: 20719441 gccgccgctgccgcttccgccaccgccgccgc 20719410 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 ccaccgccgccgcagcgcccccctcctc 292 ||||||||||||| |||| ||||||||| Sbjct: 18401021 ccaccgccgccgccgcgctcccctcctc 18400994
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || | ||||||||| | || || || |||| ||| ||| Sbjct: 2271990 ctgccggacgacgacgacctcctcgccgagatcctcctccgcctcccgccgctgccctcc 2271931 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| |||||||||| ||||| |||||||||| ||| Sbjct: 2271930 tcgctcccccgcgcctccctcgtctgcaaccgctggcgccgcctcgtcaccgaccccgcc 2271871 Query: 242 ttccgccgccgcttccgc 259 |||| ||||||||||||| Sbjct: 2271870 ttccaccgccgcttccgc 2271853 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||||||||||||||||||| || Sbjct: 2258400 cgacgacctcctctccgagatcctcctccgcctcccgccgcagccgtcctccctccctcg 2258341 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| ||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 2258340 cgcctccctcgtctgcaagcgctggcgccgcctcgtctccgaccacggcttcctccgccg 2258281 Query: 253 cttccgcgtccaccaccg 270 |||||||| || |||||| Sbjct: 2258280 cttccgcgcccgccaccg 2258263 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||| ||| ||||||||||| || Sbjct: 2319086 cgacgacctcctctccgagatcctcctccgcctcccgccgctgccatcctccctcccccg 2319027 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| |||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 2319026 cgcctccctcgtctgcacccgctggcgccgcctcgtctccgaccgcggcttcctccgccg 2318967 Query: 253 cttccgcgtccaccaccgc 271 |||||||| || ||||||| Sbjct: 2318966 cttccgcgcccgccaccgc 2318948 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 2279529 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 2279470 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 2279469 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 2279410 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 2279409 ttccaccgccgcttccgcgcccgccaccg 2279381 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 149 gagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctgc 208 ||||||||| | || || || ||||||||||| ||||||| ||||||||| ||||||| Sbjct: 1458754 gagatcctcctccgcctcccaccgcagccgtcgtccctcctccgcgcctccctcgtctgc 1458813 Query: 209 agccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccaccac 268 | ||||||||| ||||| || ||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 1458814 aagcgctggcgccgcctcgtcgccggcccggtcttcctccgccgcttccgcgcccaccac 1458873 Query: 269 c 269 | Sbjct: 1458874 c 1458874 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 2224802 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 2224743 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | |||||| ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 2224742 caagcagtggcgccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 2224683 Query: 268 ccg 270 ||| Sbjct: 2224682 ccg 2224680
>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence Length = 156654 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || | ||||||||| | || || || |||| ||| ||| Sbjct: 97644 ctgccggacgacgacgacctcctcgccgagatcctcctccgcctcccgccgctgccctcc 97585 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| |||||||||| ||||| |||||||||| ||| Sbjct: 97584 tcgctcccccgcgcctccctcgtctgcaaccgctggcgccgcctcgtcaccgaccccgcc 97525 Query: 242 ttccgccgccgcttccgc 259 |||| ||||||||||||| Sbjct: 97524 ttccaccgccgcttccgc 97507 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||||||||||||||||||| || Sbjct: 84054 cgacgacctcctctccgagatcctcctccgcctcccgccgcagccgtcctccctccctcg 83995 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| ||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 83994 cgcctccctcgtctgcaagcgctggcgccgcctcgtctccgaccacggcttcctccgccg 83935 Query: 253 cttccgcgtccaccaccg 270 |||||||| || |||||| Sbjct: 83934 cttccgcgcccgccaccg 83917 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||| ||| ||||||||||| || Sbjct: 144740 cgacgacctcctctccgagatcctcctccgcctcccgccgctgccatcctccctcccccg 144681 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| |||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 144680 cgcctccctcgtctgcacccgctggcgccgcctcgtctccgaccgcggcttcctccgccg 144621 Query: 253 cttccgcgtccaccaccgc 271 |||||||| || ||||||| Sbjct: 144620 cttccgcgcccgccaccgc 144602 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 105183 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 105124 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 105123 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 105064 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 105063 ttccaccgccgcttccgcgcccgccaccg 105035 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 50456 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 50397 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | |||||| ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 50396 caagcagtggcgccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 50337 Query: 268 ccg 270 ||| Sbjct: 50336 ccg 50334
>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence Length = 132268 Score = 99.6 bits (50), Expect = 7e-18 Identities = 116/138 (84%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || | ||||||||| | || || || |||| ||| ||| Sbjct: 990 ctgccggacgacgacgacctcctcgccgagatcctcctccgcctcccgccgctgccctcc 931 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| |||||||||| ||||| |||||||||| ||| Sbjct: 930 tcgctcccccgcgcctccctcgtctgcaaccgctggcgccgcctcgtcaccgaccccgcc 871 Query: 242 ttccgccgccgcttccgc 259 |||| ||||||||||||| Sbjct: 870 ttccaccgccgcttccgc 853 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||| ||| ||||||||||| || Sbjct: 48086 cgacgacctcctctccgagatcctcctccgcctcccgccgctgccatcctccctcccccg 48027 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| |||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 48026 cgcctccctcgtctgcacccgctggcgccgcctcgtctccgaccgcggcttcctccgccg 47967 Query: 253 cttccgcgtccaccaccgc 271 |||||||| || ||||||| Sbjct: 47966 cttccgcgcccgccaccgc 47948 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Minus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 8529 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 8470 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 8469 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 8410 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 8409 ttccaccgccgcttccgcgcccgccaccg 8381 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Minus Query: 175 gccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccga 234 ||||||||||||||||||||||||| |||||||| | |||||| || || || |||| Sbjct: 62410 gccgtcctccctcccgcgcgcctccctcgtctgcaagcagtggcgccgcgtcgtctccga 62351 Query: 235 cccggccttccgccgccgcttccgcgtccaccac 268 ||||||||||| |||||||| ||||| ||||||| Sbjct: 62350 cccggccttcctccgccgctaccgcgcccaccac 62317
>ref|NM_194774.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0087H07.11), mRNA Length = 393 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||||||||||||||||||| || Sbjct: 54 cgacgacctcctctccgagatcctcctccgcctcccgccgcagccgtcctccctccctcg 113 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| ||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 114 cgcctccctcgtctgcaagcgctggcgccgcctcgtctccgaccacggcttcctccgccg 173 Query: 253 cttccgcgtccaccacc 269 |||||||| || ||||| Sbjct: 174 cttccgcgcccgccacc 190
>dbj|AK069016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002C03, full insert sequence Length = 1523 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || |||||||||||| | || || || |||||||||||||||||||| || Sbjct: 84 cgacgacctcctctcggagatcctcctccgcctcccgccgcagccgtcctccctccctcg 143 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctc 229 ||||||| |||||||| |||||||||| |||||||| Sbjct: 144 cgcctccctcgtctgcacccgctggcgccgcctcctc 180
>dbj|AK103313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G21, full insert sequence Length = 1511 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 133 cgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcg 192 ||||||||| || || ||||||||| | || || || |||| ||| ||||||||||| || Sbjct: 89 cgacgacctcctctccgagatcctcctccgcctcccgccgctgccatcctccctcccccg 148 Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||| |||||||| |||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 149 cgcctccctcgtctgcacccgctggcgccgcctcgtctccgaccgcggcttcctccgccg 208 Query: 253 cttccgcgtccaccaccgc 271 |||||||| || ||||||| Sbjct: 209 cttccgcgcccgccaccgc 227
>ref|NM_194777.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0087H07.14), mRNA Length = 1161 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 52 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 111 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 112 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 171 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 172 ttccaccgccgcttccgcgcccgccaccg 200
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 149 gagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctgc 208 ||||||||| | || || || ||||||||||| ||||||| ||||||||| ||||||| Sbjct: 71508 gagatcctcctccgcctcccaccgcagccgtcgtccctcctccgcgcctccctcgtctgc 71567 Query: 209 agccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccaccac 268 | ||||||||| ||||| || ||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 71568 aagcgctggcgccgcctcgtcgccggcccggtcttcctccgccgcttccgcgcccaccac 71627 Query: 269 c 269 | Sbjct: 71628 c 71628
>dbj|AK119430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-A03, full insert sequence Length = 2800 Score = 89.7 bits (45), Expect = 7e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 122 ctgccggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcc 181 |||||||| | ||||||||| || || ||||||||| | | || || |||| || ||| Sbjct: 198 ctgccggacgacgacgacctcctctccgagatcctcctccacctcccgccgcgcccctcc 257 Query: 182 tccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggcc 241 || ||||| ||||||||| |||||||| ||||||||| ||||| |||||||||| ||| Sbjct: 258 tcgctcccccgcgcctccctcgtctgcaagcgctggcgccgcctcgtcaccgaccccgcc 317 Query: 242 ttccgccgccgcttccgcgtccaccaccg 270 |||| |||||||||||||| || |||||| Sbjct: 318 ttccaccgccgcttccgcgcccgccaccg 346
>dbj|AK107098.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H10, full insert sequence Length = 1686 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 149 gagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctgc 208 ||||||||| | || || || ||||||||||| ||||||| ||||||||| ||||||| Sbjct: 216 gagatcctcctccgcctcccaccgcagccgtcgtccctcctccgcgcctccctcgtctgc 275 Query: 209 agccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccaccac 268 | ||||||||| ||||| || ||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 276 aagcgctggcgccgcctcgtcgccggcccggtcttcctccgccgcttccgcgcccaccac 335 Query: 269 c 269 | Sbjct: 336 c 336
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 93782 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 93841 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 93842 cacgcccgccgccgccgagctcccctcctcggcttcttc 93880
>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence Length = 185904 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 31463 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 31522 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 31523 cacgcccgccgccgccgagctcccctcctcggcttcttc 31561 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 333 ccctcgacgcccccgaccgcctcccgc 359 |||||||||||||||||||| |||||| Sbjct: 69512 ccctcgacgcccccgaccgcgtcccgc 69538
>tpg|BK000366.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M86 transposase gene, complete cds Length = 24489 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 17126 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 17185 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 17186 cacgcccgccgccgccgagctcccctcctcggcttcttc 17224
>dbj|AK108171.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-H12, full insert sequence Length = 901 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 168 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 227 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 228 cacgcccgccgccgccgagctcccctcctcggcttcttc 266
>dbj|AK063564.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F07, full insert sequence Length = 1513 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 203 gtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtc 262 ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||| | | Sbjct: 193 gtctgcaagcgctggcgccgcctcgtctccgacccggccttccaccgccgcttccactcc 252 Query: 263 caccaccgccgccgcagcgcccccctcctcggcttcttc 301 ||| |||||||||| | || |||||||||||||||||| Sbjct: 253 cacgcccgccgccgccgagctcccctcctcggcttcttc 291
>ref|NM_194782.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNAa0087H07.6), mRNA Length = 2187 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 175 gccgtcctccctcccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccga 234 ||||||||||||||||||||||||| |||||||| | |||||| || || || |||| Sbjct: 105 gccgtcctccctcccgcgcgcctccctcgtctgcaagcagtggcgccgcgtcgtctccga 164 Query: 235 cccggccttccgccgccgcttccgcgtccaccac 268 ||||||||||| |||||||| ||||| ||||||| Sbjct: 165 cccggccttcctccgccgctaccgcgcccaccac 198
>ref|NM_194951.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0036D19.10), mRNA Length = 1380 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 198 ccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttcc 257 ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 347 ccgccgtctgcaggacatggcgcagcctcctcaccgacccggccttcctccgccgctacc 406 Query: 258 gcg 260 ||| Sbjct: 407 gcg 409
>ref|NM_194770.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0087H07.7), mRNA Length = 2286 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 96 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 155 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | |||||| ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 156 caagcagtggcgccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 215 Query: 268 ccg 270 ||| Sbjct: 216 ccg 218
>gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0036D19, complete sequence Length = 126686 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 198 ccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttcc 257 ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 55652 ccgccgtctgcaggacatggcgcagcctcctcaccgacccggccttcctccgccgctacc 55711 Query: 258 gcg 260 ||| Sbjct: 55712 gcg 55714
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 198 ccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttcc 257 ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 140011 ccgccgtctgcaggacatggcgcagcctcctcaccgacccggccttcctccgccgctacc 140070 Query: 258 gcg 260 ||| Sbjct: 140071 gcg 140073
>dbj|AK106884.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-F07, full insert sequence Length = 1577 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 198 ccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttcc 257 ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 197 ccgccgtctgcaggacatggcgcagcctcctcaccgacccggccttcctccgccgctacc 256 Query: 258 gcg 260 ||| Sbjct: 257 gcg 259
>dbj|AK106351.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H11, full insert sequence Length = 1723 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 181 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 240 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | |||||| ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 241 caagcagtggcgccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 300 Query: 268 ccg 270 ||| Sbjct: 301 ccg 303
>ref|NM_193472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1578 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttcc 245 ||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| Sbjct: 346 cgcgcctccgccgtctgcaagcgctggcgccgcctcctctccgaccgggccttcc 400
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttcc 245 ||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| Sbjct: 21064774 cgcgcctccgccgtctgcaagcgctggcgccgcctcctctccgaccgggccttcc 21064828 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 37988113 ccaccaccgccgccgcagcg 37988132 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 cccggccttccgccgccgcttccg 258 |||| ||||||||||||||||||| Sbjct: 23797204 cccgtccttccgccgccgcttccg 23797227 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ccgccgccgcttccgcgtcc 263 |||||||||||||||||||| Sbjct: 17807707 ccgccgccgcttccgcgtcc 17807726
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttcc 245 ||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| Sbjct: 32319 cgcgcctccgccgtctgcaagcgctggcgccgcctcctctccgaccgggccttcc 32373
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttcc 245 ||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| Sbjct: 127976 cgcgcctccgccgtctgcaagcgctggcgccgcctcctctccgaccgggccttcc 128030
>dbj|AK107049.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C12, full insert sequence Length = 1677 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttcc 245 ||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| Sbjct: 158 cgcgcctccgccgtctgcaagcgctggcgccgcctcctctccgaccgggccttcc 212
>dbj|AK069758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033H12, full insert sequence Length = 1556 Score = 69.9 bits (35), Expect = 6e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 148 ggagatcctcgtgcggctgcccccgcagccgtcctccctcccgcgcgcctccgccgtctg 207 |||||||||| | || || ||| |||| || ||||||||||| ||||||||| |||||| Sbjct: 108 ggagatcctcctccgcctcccctcgcatccctcctccctcccccgcgcctccctcgtctg 167 Query: 208 cagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgtccacca 267 || | ||| || ||||| || ||||||| ||||||| |||||||||||||| || ||| Sbjct: 168 caagcagtggggccgcctcgtctccgaccccgccttcctccgccgcttccgcgcccgcca 227 Query: 268 ccg 270 ||| Sbjct: 228 ccg 230
>ref|XM_476438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1836 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||||| |||||||||| | ||||||| | ||||||||||||| |||||||| |||| Sbjct: 140 cgcgcctcggccgtctgcaagccctggcgccgtctcctcaccgaccaggccttcctccgc 199 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 200 cgctaccgcg 209
>gb|AC145437.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022I08 map near C794A, complete sequence Length = 28207 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 202 cgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgt 261 |||||||||||| |||||| ||||| || ||||||| ||| ||||||||||| | |||| Sbjct: 2478 cgtctgcagccgttggcgccgcctcgtctccgaccccgccctccgccgccgcctgcgcgc 2419 Query: 262 ccaccaccgc 271 |||||||||| Sbjct: 2418 ccaccaccgc 2409
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||||| |||||||||| | ||||||| | ||||||||||||| |||||||| |||| Sbjct: 1184529 cgcgcctcggccgtctgcaagccctggcgccgtctcctcaccgaccaggccttcctccgc 1184470 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 1184469 cgctaccgcg 1184460 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||||||||||||| | ||||||| | |||||| ||||||| | ||||| |||| Sbjct: 1179373 cgcgcctccgccgtctgcaagccctggcgccgtctcctctccgaccccgtcttcctccgc 1179432 Query: 251 cgc 253 ||| Sbjct: 1179433 cgc 1179435 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| | |||| || || || |||||||||||||||||| |||| Sbjct: 1083341 cgcgcctccctcgtctgcaagccctggtgccgcatcatcaccgacccggccttcctccgc 1083282 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 1083281 cgctaccgcg 1083272 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 225 tcctcaccgacccggccttccgccgccgcttccgcg 260 ||||||||||||| ||||||| |||||||| ||||| Sbjct: 1093636 tcctcaccgaccccgccttcctccgccgctaccgcg 1093601 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgccgca 278 ||||||||| ||||| ||| |||||||||||||| Sbjct: 20776504 cgccgccgcctccgcctcctccaccgccgccgca 20776471 Score = 44.1 bits (22), Expect = 0.37 Identities = 58/70 (82%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| |||||||| ||||||||||| || ||||||| |||| Sbjct: 1088090 cgcgcctccctcgtctgcaagcgctggcgtcaactcctcaccgatcccgccttcctccgc 1088031 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 1088030 cgctaccgcg 1088021 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 caccgacccggccttccgccgccgc 253 ||||||||||||||||| ||||||| Sbjct: 22029183 caccgacccggccttcctccgccgc 22029207
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||||| |||||||||| | ||||||| | ||||||||||||| |||||||| |||| Sbjct: 86136 cgcgcctcggccgtctgcaagccctggcgccgtctcctcaccgaccaggccttcctccgc 86077 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 86076 cgctaccgcg 86067 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||||||||||||| | ||||||| | |||||| ||||||| | ||||| |||| Sbjct: 80980 cgcgcctccgccgtctgcaagccctggcgccgtctcctctccgaccccgtcttcctccgc 81039 Query: 251 cgc 253 ||| Sbjct: 81040 cgc 81042
>dbj|AK070836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071O06, full insert sequence Length = 1835 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||||| |||||||||| | ||||||| | ||||||||||||| |||||||| |||| Sbjct: 139 cgcgcctcggccgtctgcaagccctggcgccgtctcctcaccgaccaggccttcctccgc 198 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 199 cgctaccgcg 208
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 202 cgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcgt 261 |||||||||||| |||||| ||||| || ||||||| ||| ||||||||||| | |||| Sbjct: 3168259 cgtctgcagccgttggcgccgcctcgtctccgaccccgccctccgccgccgcctgcgcgc 3168318 Query: 262 ccaccaccgc 271 |||||||||| Sbjct: 3168319 ccaccaccgc 3168328 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 268 ccgccgccgcagcgcccccctcctc 292 ||||||||||| ||||||||||||| Sbjct: 4963883 ccgccgccgcatcgcccccctcctc 4963907
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 224 ctcctcaccgacccggccttccgccgccgcttccgcg 260 |||||||||||||| ||||||| |||||||||||||| Sbjct: 25655358 ctcctcaccgacccagccttcctccgccgcttccgcg 25655322
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 224 ctcctcaccgacccggccttccgccgccgcttccgcg 260 |||||||||||||| ||||||| |||||||||||||| Sbjct: 25583534 ctcctcaccgacccagccttcctccgccgcttccgcg 25583498
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 224 ctcctcaccgacccggccttccgccgccgcttccgcg 260 |||||||||||||| ||||||| |||||||||||||| Sbjct: 22596 ctcctcaccgacccagccttcctccgccgcttccgcg 22560
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 224 ctcctcaccgacccggccttccgccgccgcttccgcg 260 |||||||||||||| ||||||| |||||||||||||| Sbjct: 18360 ctcctcaccgacccagccttcctccgccgcttccgcg 18396
>ref|NM_195247.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0009C07.11), mRNA Length = 960 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || || ||||||||||||| Sbjct: 57 ggaagacgacgacctcctctccgagatcctcctccgcctcccggcgaagccgtcctccct 116 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| ||||||||| |||||||| || |||||| || || || ||||| | | ||||| Sbjct: 117 cccccgcgcctccctcgtctgcaagcggtggcgccgcgtcgtctccgacgccgtcttcct 176 Query: 247 ccgccgcttccg 258 ||| |||||||| Sbjct: 177 ccggcgcttccg 188
>ref|NM_194927.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNAa0034B05.12), mRNA Length = 1140 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||||||||||||| ||||||||| ||||| | ||| |||| |||||||||||| Sbjct: 150 cgcctccgccgtctgcaagcgctggcgccgcctcgccttcgagccgggcttccgccgccg 209 Query: 253 cttc 256 |||| Sbjct: 210 cttc 213
>gb|AC105744.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0009C07, complete sequence Length = 124266 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || || ||||||||||||| Sbjct: 62207 ggaagacgacgacctcctctccgagatcctcctccgcctcccggcgaagccgtcctccct 62148 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| ||||||||| |||||||| || |||||| || || || ||||| | | ||||| Sbjct: 62147 cccccgcgcctccctcgtctgcaagcggtggcgccgcgtcgtctccgacgccgtcttcct 62088 Query: 247 ccgccgcttccg 258 ||| |||||||| Sbjct: 62087 ccggcgcttccg 62076
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||||||||||||| ||||||||| ||||| | ||| |||| |||||||||||| Sbjct: 38343 cgcctccgccgtctgcaagcgctggcgccgcctcgccttcgagccgggcttccgccgccg 38402 Query: 253 cttc 256 |||| Sbjct: 38403 cttc 38406
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||||||||||||| ||||||||| ||||| | ||| |||| |||||||||||| Sbjct: 103998 cgcctccgccgtctgcaagcgctggcgccgcctcgccttcgagccgggcttccgccgccg 104057 Query: 253 cttc 256 |||| Sbjct: 104058 cttc 104061
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccg 238 ||||||||||||||||||| ||||||||| || ||||| |||||||| Sbjct: 23574952 cgcgcctccgccgtctgcaagcgctggcgccgcgtcctcgccgacccg 23574905 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 16634382 ccaccaccgccgccgcagcg 16634363 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 accgccgccgcagcgccccc 286 |||||||||||||||||||| Sbjct: 4984 accgccgccgcagcgccccc 4965
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccg 238 ||||||||||||||||||| ||||||||| || ||||| |||||||| Sbjct: 55916 cgcgcctccgccgtctgcaagcgctggcgccgcgtcctcgccgacccg 55869
>dbj|AK108031.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B05, full insert sequence Length = 1268 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 127 ggaaggcgacgacctgctgtcggagatcctcgtgcggctgcccccgcagccgtcctccct 186 ||||| ||||||||| || || ||||||||| | || || || || ||||||||||||| Sbjct: 51 ggaagacgacgacctcctctccgagatcctcctccgcctcccggcgaagccgtcctccct 110 Query: 187 cccgcgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccg 246 ||| ||||||||| |||||||| || |||||| || || || ||||| | | ||||| Sbjct: 111 cccccgcgcctccctcgtctgcaagcggtggcgccgcgtcgtctccgacgccgtcttcct 170 Query: 247 ccgccgcttccg 258 ||| |||||||| Sbjct: 171 ccggcgcttccg 182
>dbj|AK070930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074M13, full insert sequence Length = 1311 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 193 cgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccg 252 ||||||||||||||||| ||||||||| ||||| | ||| |||| |||||||||||| Sbjct: 204 cgcctccgccgtctgcaagcgctggcgccgcctcgccttcgagccgggcttccgccgccg 263 Query: 253 cttc 256 |||| Sbjct: 264 cttc 267
>ref|XM_465002.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1441 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 202 cgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcg 260 ||||| || |||||||| | ||||| | ||||||||||||||| |||||||||||||| Sbjct: 164 cgtctccacccgctggctccgcctcgcctccgacccggccttcctccgccgcttccgcg 222
>ref|XM_465000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||| ||||||||||||| ||||||| | || || | ||| ||||||||||| |||| Sbjct: 118 cgcgccgccgccgtctgcaggcgctggctccgcgtcgcctccgccccggccttcctccgc 177 Query: 251 cgcttccgcgtccaccacc 269 |||| ||||| || ||||| Sbjct: 178 cgctaccgcgccctccacc 196
>ref|XM_476437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||||||||||||| | ||||||| | |||||| ||||||| | ||||| |||| Sbjct: 130 cgcgcctccgccgtctgcaagccctggcgccgtctcctctccgaccccgtcttcctccgc 189 Query: 251 cgc 253 ||| Sbjct: 190 cgc 192
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 202 cgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcg 260 ||||| || |||||||| | ||||| | ||||||||||||||| |||||||||||||| Sbjct: 67996 cgtctccacccgctggctccgcctcgcctccgacccggccttcctccgccgcttccgcg 67938 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 |||||| ||||||||||||| ||||||| | || || | ||| ||||||||||| |||| Sbjct: 59723 cgcgccgccgccgtctgcaggcgctggctccgcgtcgcctccgccccggccttcctccgc 59782 Query: 251 cgcttccgcgtccaccacc 269 |||| ||||| || ||||| Sbjct: 59783 cgctaccgcgccctccacc 59801
>dbj|AK109705.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-G04, full insert sequence Length = 1441 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 202 cgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgccgcttccgcg 260 ||||| || |||||||| | ||||| | ||||||||||||||| |||||||||||||| Sbjct: 164 cgtctccacccgctggctccgcctcgcctccgacccggccttcctccgccgcttccgcg 222
>dbj|AK070767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069J11, full insert sequence Length = 2727 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||||||||||||| | ||||||| | |||||| ||||||| | ||||| |||| Sbjct: 131 cgcgcctccgccgtctgcaagccctggcgccgtctcctctccgaccccgtcttcctccgc 190 Query: 251 cgc 253 ||| Sbjct: 191 cgc 193
>ref|NM_194191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| | |||| || || || |||||||||||||||||| |||| Sbjct: 85 cgcgcctccctcgtctgcaagccctggtgccgcatcatcaccgacccggccttcctccgc 144 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 145 cgctaccgcg 154
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| | |||| || || || |||||||||||||||||| |||| Sbjct: 80929 cgcgcctccctcgtctgcaagccctggtgccgcatcatcaccgacccggccttcctccgc 80870 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 80869 cgctaccgcg 80860 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 225 tcctcaccgacccggccttccgccgccgcttccgcg 260 ||||||||||||| ||||||| |||||||| ||||| Sbjct: 91224 tcctcaccgaccccgccttcctccgccgctaccgcg 91189 Score = 44.1 bits (22), Expect = 0.37 Identities = 58/70 (82%) Strand = Plus / Minus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| |||||||| ||||||||||| || ||||||| |||| Sbjct: 85678 cgcgcctccctcgtctgcaagcgctggcgtcaactcctcaccgatcccgccttcctccgc 85619 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 85618 cgctaccgcg 85609
>ref|NM_194195.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Plus Query: 225 tcctcaccgacccggccttccgccgccgcttccgcg 260 ||||||||||||| ||||||| |||||||| ||||| Sbjct: 119 tcctcaccgaccccgccttcctccgccgctaccgcg 154
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccga 234 ||||||||| |||||||| ||||||||| ||||||||||||| Sbjct: 6551 cgcgcctccctcgtctgcaaacgctggcgccgcctcctcaccga 6594
>ref|NM_194811.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0034A02.9), mRNA Length = 1185 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 333 ccctcgacgcccccgaccgcctcccgc 359 |||||||||||||||||||| |||||| Sbjct: 233 ccctcgacgcccccgaccgcgtcccgc 259
>dbj|AK072788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142B11, full insert sequence Length = 1294 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 333 ccctcgacgcccccgaccgcctcccgc 359 |||||||||||||||||||| |||||| Sbjct: 253 ccctcgacgcccccgaccgcgtcccgc 279
>ref|NM_195194.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNAb0022I16.8), mRNA Length = 975 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 183 ccctcccgcgcgcctccgccgtctgcagccgctggcgc 220 ||||| |||||||| || |||||||| ||||||||||| Sbjct: 71 ccctcgcgcgcgccgccaccgtctgccgccgctggcgc 108
>ref|XM_476423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 44.1 bits (22), Expect = 0.37 Identities = 58/70 (82%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| |||||||| ||||||||||| || ||||||| |||| Sbjct: 121 cgcgcctccctcgtctgcaagcgctggcgtcaactcctcaccgatcccgccttcctccgc 180 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 181 cgctaccgcg 190
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 183 ccctcccgcgcgcctccgccgtctgcagccgctggcgc 220 ||||| |||||||| || |||||||| ||||||||||| Sbjct: 125533 ccctcgcgcgcgccgccaccgtctgccgccgctggcgc 125496
>ref|XM_822860.1| Trypanosoma brucei TREU927 fibrillarin (Tb10.61.1920) partial mRNA Length = 915 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 ccgcgtccaccaccgccgccgc 277 |||||||||||||||||||||| Sbjct: 104 ccgcgtccaccaccgccgccgc 83
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gcgcctccgccgtctgcagccg 213 |||||||||||||||||||||| Sbjct: 104943 gcgcctccgccgtctgcagccg 104922
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 cgacctgctgtcggagatcctc 157 |||||||||||||||||||||| Sbjct: 3550986 cgacctgctgtcggagatcctc 3551007
>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16, complete sequence Length = 126133 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 192 gcgcctccgccgtctgcagccg 213 |||||||||||||||||||||| Sbjct: 125276 gcgcctccgccgtctgcagccg 125297 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 183 ccctcccgcgcgcctccgccgtctgcagccgctggcgc 220 ||||| |||||||| || |||||||| ||||||||||| Sbjct: 58465 ccctcgcgcgcgccgccaccgtctgccgccgctggcgc 58428
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gcgcctccgccgtctgcagccg 213 |||||||||||||||||||||| Sbjct: 114502 gcgcctccgccgtctgcagccg 114481
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gcgcctccgccgtctgcagccg 213 |||||||||||||||||||||| Sbjct: 29195484 gcgcctccgccgtctgcagccg 29195463 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccctcccgcgcgcctccgcc 202 |||||||||||||||||||| Sbjct: 21635406 ccctcccgcgcgcctccgcc 21635387
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgc 274 ||||||||||||||||||| || ||||||| Sbjct: 84191 cgccgccgcttccgcgtcccccgccgccgc 84162
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgccgca 278 ||||||||| ||||| ||| |||||||||||||| Sbjct: 129254 cgccgccgcctccgcctcctccaccgccgccgca 129221
>dbj|AK107254.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-G06, full insert sequence Length = 1377 Score = 44.1 bits (22), Expect = 0.37 Identities = 58/70 (82%) Strand = Plus / Plus Query: 191 cgcgcctccgccgtctgcagccgctggcgcagcctcctcaccgacccggccttccgccgc 250 ||||||||| |||||||| |||||||| ||||||||||| || ||||||| |||| Sbjct: 121 cgcgcctccctcgtctgcaagcgctggcgtcaactcctcaccgatcccgccttcctccgc 180 Query: 251 cgcttccgcg 260 |||| ||||| Sbjct: 181 cgctaccgcg 190
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 gacgacctgctgtcggagatcc 155 |||||||||||||||||||||| Sbjct: 1063251 gacgacctgctgtcggagatcc 1063272
>dbj|AP000787.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712B9, complete sequence Length = 173441 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcgcc 283 |||||||||||||||||||||| Sbjct: 111720 ccaccaccgccgccgcagcgcc 111741
>ref|XM_482230.1| Oryza sativa (japonica cultivar-group), mRNA Length = 171 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| ||||| ||| ||||||||||||| Sbjct: 73 cgccgccgcctccgcctcctccaccgccgccgc 41
>ref|XM_468708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 gccgcttccgcgtccaccaccgccgccgc 277 ||||||||||||||| || |||||||||| Sbjct: 440 gccgcttccgcgtcccccgccgccgccgc 468
>ref|XM_478680.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1245 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 caccgacccggccttccgccgccgc 253 ||||||||||||||||| ||||||| Sbjct: 159 caccgacccggccttcctccgccgc 183
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 ccgccgccgcagcgcccccctcctc 292 ||||||||||| ||||||||||||| Sbjct: 49794 ccgccgccgcatcgcccccctcctc 49770
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 gccgcttccgcgtccaccaccgccgccgc 277 ||||||||||||||| || |||||||||| Sbjct: 17148331 gccgcttccgcgtcccccgccgccgccgc 17148303 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcgc 282 ||||||||||||||||||||| Sbjct: 7182234 ccaccaccgccgccgcagcgc 7182254
>ref|XM_384308.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04132.1) partial mRNA Length = 1668 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 gccgccgcttccgcgtccaccaccgccgc 274 |||||||| |||||| ||||||||||||| Sbjct: 54 gccgccgcctccgcgaccaccaccgccgc 26
>ref|XM_965245.1| PREDICTED: Tribolium castaneum similar to CG3606-PB, isoform B (LOC658894), mRNA Length = 1074 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 244 ccgccgccgcttccgcgtccaccaccgccgccg 276 ||||||||||| |||| ||||||||| |||||| Sbjct: 716 ccgccgccgctaccgcctccaccaccaccgccg 684
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 gccgcttccgcgtccaccaccgccgccgc 277 ||||||||||||||| || |||||||||| Sbjct: 39724 gccgcttccgcgtcccccgccgccgccgc 39696
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 268 ccgccgccgcagcgcccccctcctc 292 ||||||||||| ||||||||||||| Sbjct: 4945099 ccgccgccgcatcgcccccctcctc 4945123
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| ||||| ||| ||||||||||||| Sbjct: 18855701 cgccgccgcctccgcctcctccaccgccgccgc 18855669
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 249 gccgcttccgcgtccaccaccgccgccgc 277 ||||||||||||||| || |||||||||| Sbjct: 17141900 gccgcttccgcgtcccccgccgccgccgc 17141872 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcgc 282 ||||||||||||||||||||| Sbjct: 7180129 ccaccaccgccgccgcagcgc 7180149
>gb|AY987391.1| Oryza sativa (japonica cultivar-group) protein disulfide isomerase (PDI) mRNA, complete cds Length = 1915 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 ccgccgccgcagcgcccccctcctc 292 ||||||||||| ||||||||||||| Sbjct: 166 ccgccgccgcatcgcccccctcctc 142
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 ccaccaccgccgccgcagcgc 282 ||||||||||||||||||||| Sbjct: 12104 ccaccaccgccgccgcagcgc 12084
>gb|AC134229.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1081D05, complete sequence Length = 99133 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcgc 282 ||||||||||||||||||||| Sbjct: 8987 ccaccaccgccgccgcagcgc 9007
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1297_D02 Length = 104470 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 245 cgccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| ||||| ||| ||||||||||||| Sbjct: 22454 cgccgccgcctccgcctcctccaccgccgccgc 22422
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 244 ccgccgccgcttccgcgtccaccaccgccgccg 276 |||||||||| ||||| ||||||||||||||| Sbjct: 6120962 ccgccgccgcctccgccaccaccaccgccgccg 6120930
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 caccgacccggccttccgccgccgc 253 ||||||||||||||||| ||||||| Sbjct: 121227 caccgacccggccttcctccgccgc 121251
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cgcgtccaccaccgccgccgc 277 ||||||||||||||||||||| Sbjct: 83802 cgcgtccaccaccgccgccgc 83782
>dbj|AK068268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147I21, full insert sequence Length = 1878 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 268 ccgccgccgcagcgcccccctcctc 292 ||||||||||| ||||||||||||| Sbjct: 166 ccgccgccgcatcgcccccctcctc 142
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cgcgtccaccaccgccgccgc 277 ||||||||||||||||||||| Sbjct: 106766 cgcgtccaccaccgccgccgc 106746
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 caccgacccggccttccgccg 249 ||||||||||||||||||||| Sbjct: 1013708 caccgacccggccttccgccg 1013728
>gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosome 17, complete sequence Length = 223337 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaacaaacaggcttgtcctc 43 |||||||||||||||||||| Sbjct: 41766 aaacaaacaggcttgtcctc 41747
>ref|NM_197600.1| Oryza sativa (japonica cultivar-group) putative homeobox-leucine zipper protein (OSJNBb0015I11.18), mRNA Length = 456 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 246 gccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| |||| ||| ||||||||||||| Sbjct: 414 gccgccgctgccgcttccgccaccgccgccgc 445
>ref|NM_197170.1| Oryza sativa (japonica cultivar-group) putative dentin phosphoryn protein (OSJNBa0017E08.7), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 ccaccgccgccgcagcgcccccctcctc 292 ||||||||||||| |||| ||||||||| Sbjct: 77 ccaccgccgccgccgcgctcccctcctc 50
>ref|XM_463519.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 77 ccaccaccgccgccgcagcg 96
>ref|XM_472573.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1185 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccctcccgcgcgcctccgcc 202 |||||||||||||||||||| Sbjct: 122 ccctcccgcgcgcctccgcc 141
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gcctgaggctcgacgacggc 391 |||||||||||||||||||| Sbjct: 42564 gcctgaggctcgacgacggc 42545
>gb|AY355778.1| Canis familiaris isolate cOR6B8 olfactory receptor family 6 subfamily B-like gene, partial sequence Length = 936 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 147 ccgccgcagcgcccccctcc 166
>gb|AY355762.1| Canis familiaris isolate cOR6B7 olfactory receptor family 6 subfamily B-like gene, partial sequence Length = 890 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 147 ccgccgcagcgcccccctcc 166
>gb|AY559048.1| Oryza sativa (japonica cultivar-group) homeodomain leucine zipper protein 30 (hox30) pseudogene, partial sequence Length = 386 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 246 gccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| |||| ||| ||||||||||||| Sbjct: 212 gccgccgctgccgcttccgccaccgccgccgc 243
>ref|XM_543313.2| PREDICTED: Canis familiaris olfactory receptor (OR12C12), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 267 ccgccgcagcgcccccctcc 286
>ref|XM_543314.2| PREDICTED: Canis familiaris cOR6B8 olfactory receptor family 6 subfamily B-like (cOR6B8), mRNA Length = 1260 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 468 ccgccgcagcgcccccctcc 487
>ref|XM_845667.1| PREDICTED: Canis familiaris similar to olfactory receptor Olr1343 (LOC608598), mRNA Length = 351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 147 ccgccgcagcgcccccctcc 166
>ref|XM_844904.1| PREDICTED: Canis familiaris similar to olfactory receptor 1414 (LOC608013), mRNA Length = 1008 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 216 ccgccgcagcgcccccctcc 235
>ref|XM_845232.1| PREDICTED: Canis familiaris similar to olfactory receptor 1414 (LOC608264), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 264 ccgccgcagcgcccccctcc 283
>ref|XM_845221.1| PREDICTED: Canis familiaris similar to olfactory receptor Olr1343 (LOC608253), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccgccgcagcgcccccctcc 290 |||||||||||||||||||| Sbjct: 264 ccgccgcagcgcccccctcc 283
>gb|AC121595.3| Mus musculus BAC clone RP23-299A12 from chromosome X, complete sequence Length = 214297 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaggcttgtcctcactcct 49 |||||||||||||||||||| Sbjct: 144960 acaggcttgtcctcactcct 144941
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tcctcaccgacccggccttc 244 |||||||||||||||||||| Sbjct: 250361 tcctcaccgacccggccttc 250342
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 ccgcctgaggctcgacgacg 389 |||||||||||||||||||| Sbjct: 246694 ccgcctgaggctcgacgacg 246675
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cgatggaggcgctgccggaa 130 |||||||||||||||||||| Sbjct: 3335055 cgatggaggcgctgccggaa 3335036
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 caccaccgccgccgcagcgc 282 |||||||||||||||||||| Sbjct: 119309 caccaccgccgccgcagcgc 119328
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccctcccgcgcgcctccgcc 202 |||||||||||||||||||| Sbjct: 69948 ccctcccgcgcgcctccgcc 69929
>gb|AC153519.9| Mus musculus 10 BAC RP23-442N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197257 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaggcttgtcctcactcct 49 |||||||||||||||||||| Sbjct: 31933 acaggcttgtcctcactcct 31914
>gb|AC160401.8| Mus musculus 10 BAC RP23-244J10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169912 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaggcttgtcctcactcct 49 |||||||||||||||||||| Sbjct: 86278 acaggcttgtcctcactcct 86259
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 265 ccaccgccgccgcagcgcccccctcctc 292 ||||||||||||| |||| ||||||||| Sbjct: 115725 ccaccgccgccgccgcgctcccctcctc 115752
>dbj|AB084379.1| Cryptococcus humicola URA3 gene for orotidine-5'-phosphate decarboxylase, complete cds Length = 2472 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 1213 ccaccaccgccgccgcagcg 1194
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tccatccggccctcgacgcc 343 |||||||||||||||||||| Sbjct: 4054905 tccatccggccctcgacgcc 4054924
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 246 gccgccgcttccgcgtccaccaccgccgccgc 277 ||||||||| |||| ||| ||||||||||||| Sbjct: 109621 gccgccgctgccgcttccgccaccgccgccgc 109590
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 cttccgccgccgcttccgcgtccaccac 268 ||||| |||||||||||| ||||||||| Sbjct: 9493116 cttcctccgccgcttccgtgtccaccac 9493089 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cggccttccgccgccgcttccgcg 260 ||||||| |||||||||||||||| Sbjct: 972387 cggccttgcgccgccgcttccgcg 972364
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 ccgacccggccttccgccgccgct 254 ||||||| |||||||||||||||| Sbjct: 1633620 ccgaccccgccttccgccgccgct 1633643
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 69057 ccaccaccgccgccgcagcg 69076
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 tccgcgtccaccaccgccgccgcagcgc 282 ||||||||||| ||||||||||| |||| Sbjct: 2014077 tccgcgtccacgaccgccgccgccgcgc 2014104
>dbj|AP003435.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455H03 Length = 175947 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ccgccgccgcttccgcgtcc 263 |||||||||||||||||||| Sbjct: 54829 ccgccgccgcttccgcgtcc 54848
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cggccttccgccgccgcttccgcg 260 ||||||| |||||||||||||||| Sbjct: 136514 cggccttgcgccgccgcttccgcg 136491
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 130362 ccaccaccgccgccgcagcg 130343
>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1460A05 Length = 143371 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 accgccgccgcagcgccccc 286 |||||||||||||||||||| Sbjct: 4984 accgccgccgcagcgccccc 4965
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 cccggccttccgccgccgcttccg 258 |||| ||||||||||||||||||| Sbjct: 77789 cccgtccttccgccgccgcttccg 77812
>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1134_E08 Length = 153002 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cggccttccgccgccgcttccgcg 260 ||||||| |||||||||||||||| Sbjct: 10080 cggccttgcgccgccgcttccgcg 10057
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 cttccgccgccgcttccgcgtccaccac 268 ||||| |||||||||||| ||||||||| Sbjct: 56752 cttcctccgccgcttccgtgtccaccac 56725
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cctccctcccgcgcgcctccgccg 203 ||||||||||||||||| |||||| Sbjct: 148366 cctccctcccgcgcgccgccgccg 148343
>dbj|AK120595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147K17, full insert sequence Length = 5013 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 525 ccaccaccgccgccgcagcg 506
>dbj|AK120408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M08, full insert sequence Length = 3407 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 265 ccaccgccgccgcagcgcccccctcctc 292 ||||||||||||| |||| ||||||||| Sbjct: 430 ccaccgccgccgccgcgctcccctcctc 403
>ref|XM_313332.2| Anopheles gambiae str. PEST ENSANGP00000011295 (ENSANGG00000008806), partial mRNA Length = 5529 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gaccgcctcccgctcgggcgattc 370 ||||||||||||||| |||||||| Sbjct: 4920 gaccgcctcccgctccggcgattc 4897
>dbj|AK103344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126C20, full insert sequence Length = 1407 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccctcccgcgcgcctccgcc 202 |||||||||||||||||||| Sbjct: 171 ccctcccgcgcgcctccgcc 190
>dbj|AK102715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105C09, full insert sequence Length = 3192 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 343 ccaccaccgccgccgcagcg 362
>dbj|AK101399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037E13, full insert sequence Length = 3441 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 121 ccaccaccgccgccgcagcg 140
>dbj|AK073998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H21, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 cttccgccgccgcttccgcgtccaccac 268 ||||| |||||||||||| ||||||||| Sbjct: 1155 cttcctccgccgcttccgtgtccaccac 1128
>dbj|AK068435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155N15, full insert sequence Length = 2751 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 cttccgccgccgcttccgcgtccaccac 268 ||||| |||||||||||| ||||||||| Sbjct: 1221 cttcctccgccgcttccgtgtccaccac 1194
>dbj|AK063934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D06, full insert sequence Length = 1549 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccctcccgcgcgcctccgcc 202 |||||||||||||||||||| Sbjct: 170 ccctcccgcgcgcctccgcc 189
>dbj|AB114855.1| Oryza sativa (japonica cultivar-group) mRNA for stromal ascorbate peroxidase, complete cds Length = 1379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccctcccgcgcgcctccgcc 202 |||||||||||||||||||| Sbjct: 162 ccctcccgcgcgcctccgcc 181
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 tccgcgtccaccaccgccgccgcagcgc 282 ||||||||||| ||||||||||| |||| Sbjct: 915387 tccgcgtccacgaccgccgccgccgcgc 915360
>emb|AJ532423.1|ECL532423 Euglena clara partial 18S rRNA gene, strain SAG 25.98 Length = 3314 Score = 40.1 bits (20), Expect = 5.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 268 ccgccgccgcagcgcccccctcctcggcttct 299 |||||||||| ||||||| ||||||||||||| Sbjct: 1330 ccgccgccgc-gcgccccgctcctcggcttct 1360
>gb|U31512.1|RMU31512 Rhizobium meliloti RmDEGP (degP) gene, complete cds Length = 1974 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 ccgcctgaggctcgacgacg 389 |||||||||||||||||||| Sbjct: 1262 ccgcctgaggctcgacgacg 1243
>emb|BX005240.7| Mouse DNA sequence from clone RP23-185M16 on chromosome X, complete sequence Length = 197310 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 acaggcttgtcctcactcct 49 |||||||||||||||||||| Sbjct: 183655 acaggcttgtcctcactcct 183674
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ggcgccacgggctcggcctc 427 |||||||||||||||||||| Sbjct: 29391 ggcgccacgggctcggcctc 29372
>dbj|AP002761.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-800A3, complete sequence Length = 196988 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 ctggcgcagcctcctcaccgaccc 237 ||||| |||||||||||||||||| Sbjct: 95201 ctggcccagcctcctcaccgaccc 95224
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 ccaccaccgccgccgcagcg 281 |||||||||||||||||||| Sbjct: 84389 ccaccaccgccgccgcagcg 84408 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,845,227 Number of Sequences: 3902068 Number of extensions: 2845227 Number of successful extensions: 78146 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 74128 Number of HSP's gapped (non-prelim): 4005 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
