>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Brain cyclic nucleotide
           gated channel 3) (BCNG-3)
          Length = 1186

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 155 HRVQLQARRSPIPTPLVEAPLL 220
           HRVQ  A  +P PTP++  PL+
Sbjct: 742 HRVQAAASATPTPTPVIWTPLI 763

>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4
          Length = 1203

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 155 HRVQLQARRSPIPTPLVEAPLL 220
           HRVQ  A  +P PTP++  PL+
Sbjct: 757 HRVQAAASATPTPTPVIWTPLI 778

>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4
          Length = 1198

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 155 HRVQLQARRSPIPTPLVEAPLL 220
           HRVQ  A  +P PTP++  PL+
Sbjct: 757 HRVQAAASATPTPTPVIWTPLI 778

>IF2_XYLFT (Q87EV4) Translation initiation factor IF-2|
          Length = 892

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 255 ASRAHIPGRRPARRGASTRGVGIGERRA 172
           A + H+     ARRG++TRG G G  R+
Sbjct: 255 AGQMHLTAAERARRGSNTRGKGGGSHRS 282

>IF2_XYLFA (Q9PGR3) Translation initiation factor IF-2|
          Length = 892

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 255 ASRAHIPGRRPARRGASTRGVGIGERR 175
           A + H+     ARRG++TRG G G  R
Sbjct: 255 AGQMHLTAAERARRGSNTRGKGGGSHR 281

>MRAY_SYNP7 (Q31RY5) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 365

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 188 IPTPLVEAPLLAGRRPGIWAL 250
           IP  L+ A +LAGR P +WAL
Sbjct: 100 IPAGLLPALILAGRSPLVWAL 120

>MRAY_SYNP6 (Q5N2C7) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 368

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 188 IPTPLVEAPLLAGRRPGIWAL 250
           IP  L+ A +LAGR P +WAL
Sbjct: 103 IPAGLLPALILAGRSPLVWAL 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.122    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,473,589
Number of Sequences: 219361
Number of extensions: 310106
Number of successful extensions: 766
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)