>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  119 bits (60), Expect = 2e-24
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                         
Query: 56    cacgttgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 115
             ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 18340

                     
Query: 116   ccgcacgg 123
             ||||||||
Sbjct: 18341 ccgcacgg 18348

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  119 bits (60), Expect = 2e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                           
Query: 56      cacgttgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 115
               ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798674 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7798615

                       
Query: 116     ccgcacgg 123
               ||||||||
Sbjct: 7798614 ccgcacgg 7798607

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  119 bits (60), Expect = 2e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                           
Query: 56      cacgttgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 115
               ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7868761 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7868702

                       
Query: 116     ccgcacgg 123
               ||||||||
Sbjct: 7868701 ccgcacgg 7868694

>ref|XM_466267.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 52.0 bits (26), Expect = 4e-04
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 65  ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgt 114
           |||||||||||| |||| |||||||| ||| | || ||||||||||||||
Sbjct: 70  ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgt 119

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 4e-04
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 65       ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgt 114
                |||||||||||| |||| |||||||| ||| | || ||||||||||||||
Sbjct: 21385077 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgt 21385126

>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 52.0 bits (26), Expect = 4e-04
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 65    ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgt 114
             |||||||||||| |||| |||||||| ||| | || ||||||||||||||
Sbjct: 45030 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgt 45079

>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  ccgacgacgtcgccgtcgac 100
           ||||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcgac 564

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 75      ggatgcccgacgacgtcgcc 94
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395

>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
             complete sequence
          Length = 125650

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    cccgacgacgtcgccgtcg 98
             |||||||||||||||||||
Sbjct: 88745 cccgacgacgtcgccgtcg 88727

>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence
          Length = 171000

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    cgacgtcgccgtcgactgc 103
             |||||||||||||||||||
Sbjct: 25665 cgacgtcgccgtcgactgc 25683

>gb|AY098942.1| Homarus americanus ionotropic glutamate receptor subunit mRNA,
            complete cds
          Length = 3514

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 14   atgatgaacccaaagagcc 32
            |||||||||||||||||||
Sbjct: 2150 atgatgaacccaaagagcc 2132

>gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22C-22C, BAC clone
             BACR11F10, complete sequence
          Length = 175115

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    cgacgtcgccgtcgactgc 103
             |||||||||||||||||||
Sbjct: 27791 cgacgtcgccgtcgactgc 27773

>gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, region 22A-22B, BAC clone
              BACR18A24, complete sequence
          Length = 160551

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     cgacgtcgccgtcgactgc 103
              |||||||||||||||||||
Sbjct: 143454 cgacgtcgccgtcgactgc 143472

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 85      cgacgtcgccgtcgactgc 103
               |||||||||||||||||||
Sbjct: 4325543 cgacgtcgccgtcgactgc 4325561

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 80       cccgacgacgtcgccgtcg 98
                |||||||||||||||||||
Sbjct: 20666705 cccgacgacgtcgccgtcg 20666687

>gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequence
          Length = 124024

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 83     gacgacgtcgccgtcgact 101
              |||||||||||||||||||
Sbjct: 118506 gacgacgtcgccgtcgact 118524

>ref|XM_233740.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           MGC19604 (LOC313786), mRNA
          Length = 525

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 54  accacgttgacctcatcccgggg 76
           |||||||||||| ||||||||||
Sbjct: 185 accacgttgaccacatcccgggg 163

>ref|XM_218851.3| PREDICTED: Rattus norvegicus interleukin 16 (Il16), mRNA
          Length = 4860

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 26   aagagccgtgtccaggggt 44
            |||||||||||||||||||
Sbjct: 1886 aagagccgtgtccaggggt 1904

>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0054L03
          Length = 183623

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    cgacgtcgccgtcgactgc 103
             |||||||||||||||||||
Sbjct: 88337 cgacgtcgccgtcgactgc 88355

>dbj|AK121054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055P22, full
           insert sequence
          Length = 1972

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 80  cccgacgacgtcgccgtcg 98
           |||||||||||||||||||
Sbjct: 269 cccgacgacgtcgccgtcg 287

>gb|AC002523.1|AC002523 Homo sapiens Xq28 BACs 360 F12, GSHB-555C13, complete sequence
          Length = 228516

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     ctatgatgaacccaaagag 30
              |||||||||||||||||||
Sbjct: 198125 ctatgatgaacccaaagag 198107

>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence
          Length = 54288

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    cgacgacgtcgccgtcgac 100
             |||||||||||||||||||
Sbjct: 18023 cgacgacgtcgccgtcgac 18041

>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete
             sequence
          Length = 346734

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    cgacgtcgccgtcgactgc 103
             |||||||||||||||||||
Sbjct: 70349 cgacgtcgccgtcgactgc 70367

>emb|CT573418.2| Pan troglodytes chromosome X clone PTB-046H01 map Xq28, complete
             sequence
          Length = 161084

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    ctatgatgaacccaaagag 30
             |||||||||||||||||||
Sbjct: 15991 ctatgatgaacccaaagag 15973

>emb|CT574566.2| Pan troglodytes chromosome X clone CH251-413C05 map Xq28, complete
             sequence
          Length = 161928

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    ctatgatgaacccaaagag 30
             |||||||||||||||||||
Sbjct: 75192 ctatgatgaacccaaagag 75174

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 79      gcccgacgacgtcgccgtc 97
               |||||||||||||||||||
Sbjct: 1601767 gcccgacgacgtcgccgtc 1601749

>gb|AC005749.1|AC005749 Drosophila melanogaster DNA sequence (P1s DS06378 (D278) and DS03995
             (D277)), complete sequence
          Length = 96288

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    cgacgtcgccgtcgactgc 103
             |||||||||||||||||||
Sbjct: 22127 cgacgtcgccgtcgactgc 22145

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     cgacgacgtcgccgtcgac 100
              |||||||||||||||||||
Sbjct: 609152 cgacgacgtcgccgtcgac 609134

>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 78     tgcccgacgacgtcgccgtcgac 100
              |||||||||||||||||| ||||
Sbjct: 266284 tgcccgacgacgtcgccgacgac 266306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,026,412
Number of Sequences: 3902068
Number of extensions: 1026412
Number of successful extensions: 53604
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52936
Number of HSP's gapped (non-prelim): 668
length of query: 138
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 117
effective length of database: 17,151,101,840
effective search space: 2006678915280
effective search space used: 2006678915280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)