ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet07d11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor (inv1 gene) Length = 2250 Score = 167 bits (84), Expect = 3e-38 Identities = 120/132 (90%) Strand = Plus / Plus Query: 268 cagcagcaggggccctgagtccggcgtctcggagaaggcgtccggcgccgcagcgcacgg 327 ||||||| |||| |||||||| ||||||||||||||| |||| |||||||| |||||||| Sbjct: 302 cagcagccgggggcctgagtctggcgtctcggagaagacgtctggcgccgccgcgcacgg 361 Query: 328 cggcatgcttggtgccgacgccggcggcaacgcgttcccgtggagcaacgccatgctcca 387 ||||||||| || || || ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 362 cggcatgctgggcgcggatgccagcggcaacgcgttcccgtggagcaatgccatgctcca 421 Query: 388 gtggcagcgcac 399 |||||||||||| Sbjct: 422 gtggcagcgcac 433 Score = 95.6 bits (48), Expect = 1e-16 Identities = 125/150 (83%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 35 ctgccgtgctcctactggcctctgccggacgatgccgaggccgccgt---ggtgggccac 91 ||||||||||||||| ||| |||||||| ||||||||||||||| |||||| | | Sbjct: 72 ctgccgtgctcctacgcgccgctgccggaggatgccgaggccgccaccacggtggggcgc 131 Query: 92 gcgcgccggagtgccgccccgctgtgcgccgcgctgctggcggcgtcggcagccgtgctc 151 |||||||||| ||| | |||||| || || |||||| || || | | |||||||||||| Sbjct: 132 gcgcgccggactgcaggcccgctctgtgctgcgctgatgctggtgaccgcagccgtgctc 191 Query: 152 ctcgtggttgccgcgctcgccggcgtcagg 181 || |||||||||||||||||||||||||| Sbjct: 192 cttatggttgccgcgctcgccggcgtcagg 221
>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene) Length = 2038 Score = 139 bits (70), Expect = 8e-30 Identities = 117/132 (88%), Gaps = 3/132 (2%) Strand = Plus / Plus Query: 268 cagcagcaggggccctgagtccggcgtctcggagaaggcgtccggcgccgcagcgcacgg 327 ||||||| ||||||| |||| |||||||||||||||| |||||||||||| || ||||| Sbjct: 289 cagcagccggggcccggagtacggcgtctcggagaagacgtccggcgccggcgcccacgg 348 Query: 328 cggcatgcttggtgccgacgccggcggcaacgcgttcccgtggagcaacgccatgctcca 387 |||||||| || || ||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 349 tggcatgctgggcgcggacgccggc---aacgcgttcccgtggagcaatgccatgctcca 405 Query: 388 gtggcagcgcac 399 |||||||||||| Sbjct: 406 gtggcagcgcac 417 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 161 gccgcgctcgccggcgtcaggatcgctggtcagctgcc 198 |||||||| |||||||||||| |||| || |||||||| Sbjct: 188 gccgcgctggccggcgtcagggtcgccggccagctgcc 225
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds Length = 2337 Score = 127 bits (64), Expect = 3e-26 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 272 agcaggggccctgagtccggcgtctcggagaaggcgtccggcgccgc-agcgca--cggc 328 ||||| || |||||||| ||||| ||||||||| ||||||| ||||| |||| |||| Sbjct: 339 agcagagggcctgagtcaggcgtgtcggagaagacgtccggggccgccagcgagagcggc 398 Query: 329 ggcatgcttggtgccgacgccggcggcaacgcgttcccgtggagcaacgccatgctccag 388 |||||||| || |||||||||||| |||||||||||||||||||||| || ||||||||| Sbjct: 399 ggcatgctgggcgccgacgccggcagcaacgcgttcccgtggagcaatgcgatgctccag 458 Query: 389 tggcagcgcaccggc 403 ||||||||||||||| Sbjct: 459 tggcagcgcaccggc 473
>dbj|AB159786.1| Triticum aestivum 1-SST gene for sucrose:sucrose 1-fructosyltransferase, complete cds Length = 3326 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 355 caacgcgttcccgtggagcaacgccatgctccagtggcagcgcaccggc 403 |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 324 caacgcgttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 372
>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose 1-fructosytransferase, complete cds Length = 2330 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 355 caacgcgttcccgtggagcaacgccatgctccagtggcagcgcaccggc 403 |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 379 caacgcgttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 427
>emb|AJ532549.1|LTE532549 Lolium temulentum mRNA for putative soluble acid invertase (inv1:4 gene) Length = 2407 Score = 87.7 bits (44), Expect = 3e-14 Identities = 120/144 (83%), Gaps = 6/144 (4%) Strand = Plus / Plus Query: 266 agcagcagcaggggccctgagtccggcgtctcggagaaggcgtccggcgccgcagc---g 322 ||||||||||| || |||||||| ||||| ||||||||| ||||||| | | | || | Sbjct: 398 agcagcagcagagggcctgagtcgggcgtgtcggagaagacgtccggtgtccctgccgag 457 Query: 323 cacggcggcatgcttggtgccgacgccg---gcggcaacgcgttcccgtggagcaacgcc 379 |||||||||||||| | || ||||| | || |||||||||||||||||||||| || Sbjct: 458 cacggcggcatgctggcggcggacgcagccagcagcaacgcgttcccgtggagcaatgcg 517 Query: 380 atgctccagtggcagcgcaccggc 403 |||||||||||||| ||||||||| Sbjct: 518 atgctccagtggcaacgcaccggc 541 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 33 tgctgccgtgctcctactggcctctgccggacgatgccgaggccgccgtggt 84 |||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 180 tgctgccgtgctcctatgtgccgttgccggacgatgccgaggccgccgtggt 231
>gb|AY575717.1| Triticum monococcum vacuolar invertase1 (vin1) mRNA, complete cds Length = 2414 Score = 77.8 bits (39), Expect = 2e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccggc 403 |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 394 gttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 436
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 77.8 bits (39), Expect = 2e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 349 cggcggcaacgcgttcccgtggagcaacgccatgctccagtggcagcgcac 399 |||||| |||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 4936 cggcgggaacgcgttcccgtggagcaatgccatgctgcagtggcagcgcac 4986 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 266 agcagcagcaggggccctgagtccggcgtctcggagaaggcgtccggcgc 315 ||||||||||||||||| ||| ||||||| ||||||||| |||||||||| Sbjct: 4841 agcagcagcaggggccccgaggccggcgtgtcggagaagacgtccggcgc 4890 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 tgctcctcgtggttgccgcgctcgccggcgtc 178 ||||||||| || |||||||||||||||||| Sbjct: 4752 tgctcctcgccgtggccgcgctcgccggcgtc 4783
>gb|AY245431.1| Lolium perenne sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 1962 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 327 gttcccgtggagcaacgccatgctgcagtggcagcgcaccgg 368
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucrose-sucrose-1-fructosyltransferase (1-sst gene) Length = 2157 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 362 ttcccgtggagcaacgccatgctccagtggcagcgcaccggc 403 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 259 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 300
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 362 ttcccgtggagcaacgccatgctccagtggcagcgcaccggc 403 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 376 ttcccgtggagcaacgccatgctgcagtggcagcgcaccggc 417
>emb|AJ297369.1|FAR297369 Festuca arundinacea mRNA for sucrose:sucrose 1-fructosyltransferase (1-SST gene) Length = 2045 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 330 gttcccgtggagcaacgccatgctgcagtggcagcgcaccgg 371
>gb|AY302083.1| Saccharum hybrid cultivar soluble acid invertase (ShinvA) mRNA, partial cds Length = 2274 Score = 73.8 bits (37), Expect = 4e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 339 gtgccgacgccggcggcaacgcgttcccgtggagcaacgccatgctccagtggcagcgca 398 |||| |||| |||||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 218 gtgctgacggcggcgggaacgcgttcccgtggagcaatgcgatgctgcagtggcagcgca 277 Query: 399 c 399 | Sbjct: 278 c 278 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 266 agcagcagcaggggccctgagtccggcgtctcggagaaggcgtccggcgc 315 |||| |||||||||||| || ||||||| ||||||||| |||||||||| Sbjct: 133 agcatcagcaggggccccgacgccggcgtgtcggagaagacgtccggcgc 182 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 tgctcctcgtggttgccgcgctcgccggcgtc 178 ||||||||| || |||||||||||||||||| Sbjct: 56 tgctcctcgccgtggccgcgctcgccggcgtc 87
>gb|AF062735.1|AF062735 Saccharum officinarum soluble acid invertase mRNA, partial cds Length = 1808 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 343 cgacgccggcggcaacgcgttcccgtggagcaacgccatgctccagtggcagcgcac 399 ||||| |||||| |||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 3 cgacggcggcgggaacgcgttcccgtggagcaatgcgatgctgcagtggcagcgcac 59
>gb|AF062734.1|AF062734 Saccharum robustum soluble acid invertase mRNA, partial cds Length = 1808 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 343 cgacgccggcggcaacgcgttcccgtggagcaacgccatgctccagtggcagcgcac 399 ||||| |||||| |||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 3 cgacggcggcgggaacgcgttcccgtggagcaatgcgatgctgcagtggcagcgcac 59
>gb|AF481763.1| Lolium perenne fructosyltransferase (FT1) mRNA, complete cds Length = 2386 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcac 399 |||||||||||||||||||||||| |||||||||||||| Sbjct: 380 gttcccgtggagcaacgccatgctgcagtggcagcgcac 418
>emb|AJ532552.1|LTE532552 Lolium temulentum partial inv1:2 gene for putative soluble acid invertase, exons 1-3 Length = 1381 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcac 399 |||||||||||||||||||||||| |||||||||||||| Sbjct: 356 gttcccgtggagcaacgccatgctgcagtggcagcgcac 394
>gb|AF492836.1| Lolium perenne putative sucrose:sucrose 1-fructosyltransferase mRNA, complete cds Length = 2508 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 362 ttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 348 ttcccgtggagcaacgccatgctgcagtggcagcacaccgg 388
>dbj|AB125218.1| Lolium perenne mRNA for putative fructosyltransferase2, complete cds Length = 2462 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 362 ttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 333 ttcccgtggagcaacgccatgctgcagtggcagcacaccgg 373
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 359 gcgttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 |||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 343493 gcgttcccgtggagcaacgcgatgctgcaatggcagcgcaccgg 343536 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 agcaggggccctgagtccggcgtctcggagaaggcgtc 309 |||||||| || ||||||||||| ||||||||| |||| Sbjct: 343406 agcagggggccggagtccggcgtgtcggagaagacgtc 343443
>gb|AF276704.1|AF276704 Oryza sativa vacuolar acid invertase (INV3) gene, complete cds Length = 3725 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 359 gcgttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 |||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 552 gcgttcccgtggagcaacgcgatgctgcaatggcagcgcaccgg 595 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 agcaggggccctgagtccggcgtctcggagaaggcgtc 309 |||||||| || ||||||||||| ||||||||| |||| Sbjct: 465 agcagggggccggagtccggcgtgtcggagaagacgtc 502
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 359 gcgttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 |||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 72277 gcgttcccgtggagcaacgcgatgctgcaatggcagcgcaccgg 72320 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 agcaggggccctgagtccggcgtctcggagaaggcgtc 309 |||||||| || ||||||||||| ||||||||| |||| Sbjct: 72190 agcagggggccggagtccggcgtgtcggagaagacgtc 72227
>dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002K22, full insert sequence Length = 2443 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 359 gcgttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 |||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 438 gcgttcccgtggagcaacgcgatgctgcaatggcagcgcaccgg 481 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 272 agcaggggccctgagtccggcgtctcggagaaggcgtc 309 |||||||| || ||||||||||| ||||||||| |||| Sbjct: 351 agcagggggccggagtccggcgtgtcggagaagacgtc 388
>dbj|AB088410.1| Triticum aestivum 1-FFT-B mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2251 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 362 ttcccgtggagcaacgccatgctccagtggcagcgcaccggc 403 ||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 ttcccgtggagcaacgccatgctggggtggcagcgcaccggc 378
>gb|AF192394.1|AF192394 Poa secunda sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2057 Score = 56.0 bits (28), Expect = 9e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 357 acgcgttcccgtggagcaacgccatgctccagtggcagcg 396 |||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 254 acgccttcccgtggagcaactccatgctgcagtggcagcg 293
>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds Length = 2279 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 ||||||||||||||||| ||||| |||||||||||| |||| Sbjct: 314 gttcccgtggagcaacgagatgctgcagtggcagcgcgccgg 355
>emb|AJ532551.1|LTE532551 Lolium temulentum partial mRNA for putative soluble acid invertase (inv1:2 gene) Length = 1998 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 370 gagcaacgccatgctccagtggcagcgcac 399 ||||||||||||||| |||||||||||||| Sbjct: 1 gagcaacgccatgctgcagtggcagcgcac 30
>emb|AJ532550.1|LTE532550 Lolium temulentum mRNA for putative fructan 6-fructosyltransferase (6ft gene) Length = 2331 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 ||||||||||||||||| ||||| |||||||||||| |||| Sbjct: 317 gttcccgtggagcaacgagatgctgcagtggcagcgcgccgg 358
>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds Length = 2268 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 ||||||||||||||||| ||||| |||||||||||| |||| Sbjct: 308 gttcccgtggagcaacgagatgctgcagtggcagcgcgccgg 349
>dbj|AB029887.1| Triticum aestivum 6-SFT mRNA for sucrose:fructan 6-fructosyltransferase, complete cds Length = 2220 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgca 398 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 248 gttcccgtggagcaacgagatgctgcagtggcagcgca 285
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase Length = 2091 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgca 398 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 255 gttcccgtggagcaacgagatgctgcagtggcagcgca 292
>gb|DQ073970.1| Lolium perenne fructosyltransferase-like protein mRNA, complete cds Length = 1962 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcgcaccgg 402 ||||||||||| || ||| ||||| ||||||||||||||||| Sbjct: 351 gttcccgtggaccagcgcgatgctgcagtggcagcgcaccgg 392
>gb|BC073152.1| Homo sapiens emopamil binding protein-like, mRNA (cDNA clone IMAGE:6022481), complete cds Length = 1060 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 111 gctgtgcgccgcgctgctggcggcg 135
>ref|XM_529592.1| PREDICTED: Pan troglodytes LOC452721 (LOC452721), mRNA Length = 418 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 90 gctgtgcgccgcgctgctggcggcg 114
>ref|NM_032565.1| Homo sapiens emopamil binding protein-like (EBPL), mRNA Length = 931 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 100 gctgtgcgccgcgctgctggcggcg 124
>gb|BC021021.1| Homo sapiens emopamil binding protein-like, mRNA (cDNA clone IMAGE:3622349) Length = 980 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 88 gctgtgcgccgcgctgctggcggcg 112
>gb|AC156596.2| Laccaria bicolor clone JGIAHZW-15X, complete sequence Length = 40924 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 225 ccggccacacgacgacggccgacgacacg 253 |||||||||||||||||| |||||||||| Sbjct: 14325 ccggccacacgacgacggacgacgacacg 14297
>gb|BC018478.1| Homo sapiens emopamil binding protein-like, mRNA (cDNA clone MGC:21376 IMAGE:4476654), complete cds Length = 718 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 77 gctgtgcgccgcgctgctggcggcg 101
>gb|AF243433.1| Homo sapiens delta8-delta7 sterol isomerase related protein EBRP (EBRP) mRNA, complete cds Length = 931 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 100 gctgtgcgccgcgctgctggcggcg 124
>emb|AL135901.23| Human DNA sequence from clone RP11-432M24 on chromosome 13 Contains a novel gene (LOC115761), the gene for emopamil binding related protein delta8-delta7sterol isomerase related protein (EBRP), the 3' end of the KPNA3 gene for karyopherin alpha 3 (importin alpha 4), a novel pseudogene and two CpG islands, complete sequence Length = 149433 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 94702 gctgtgcgccgcgctgctggcggcg 94678
>emb|CR618798.1| full-length cDNA clone CS0DI043YE20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 872 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||||||||||||||||||| Sbjct: 61 gctgtgcgccgcgctgctggcggcg 85
>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA, complete cds Length = 2155 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 359 gcgttcccgtggagcaacgccatgctccagtggcagcgcac 399 ||||||||||||||||| || ||||| || ||||||||||| Sbjct: 325 gcgttcccgtggagcaatgcgatgctgcaatggcagcgcac 365
>gb|DQ148410.1| Oryza sativa (indica cultivar-group) sodium transporter (SKC1) mRNA, complete cds Length = 1665 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 232 cacgacgacggccgacgacacggt 255 |||||||||||||||||||||||| Sbjct: 1218 cacgacgacggccgacgacacggt 1195
>ref|NM_189316.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 232 cacgacgacggccgacgacacggt 255 |||||||||||||||||||||||| Sbjct: 1218 cacgacgacggccgacgacacggt 1195
>gb|AF211253.1| Agropyron cristatum sucrose:fructan 6-fructosyltransferase (6-SFT) mRNA, complete cds Length = 2174 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 361 gttcccgtggagcaacgccatgctccagtggcagcg 396 ||||||||||||||||| ||||| ||||||||||| Sbjct: 289 gttcccgtggagcaacgagatgctgcagtggcagcg 324
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 232 cacgacgacggccgacgacacggt 255 |||||||||||||||||||||||| Sbjct: 11460134 cacgacgacggccgacgacacggt 11460157 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 acgacgacggccgacgacacggtc 256 ||||||||||||||||||| |||| Sbjct: 22261861 acgacgacggccgacgacaaggtc 22261884
>dbj|AP006856.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa173H09 Length = 39054 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 232 cacgacgacggccgacgacacggt 255 |||||||||||||||||||||||| Sbjct: 6295 cacgacgacggccgacgacacggt 6318
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 232 cacgacgacggccgacgacacggt 255 |||||||||||||||||||||||| Sbjct: 97332 cacgacgacggccgacgacacggt 97355
>dbj|AK108663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F10, full insert sequence Length = 2160 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 232 cacgacgacggccgacgacacggt 255 |||||||||||||||||||||||| Sbjct: 1385 cacgacgacggccgacgacacggt 1362
>ref|XM_469445.1| Oryza sativa (japonica cultivar-group), mRNA Length = 585 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 gccgacgccggcggcaacgcgt 362 |||||||||||||||||||||| Sbjct: 51 gccgacgccggcggcaacgcgt 72
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 gccgacgccggcggcaacgcgt 362 |||||||||||||||||||||| Sbjct: 27992700 gccgacgccggcggcaacgcgt 27992721
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 341 gccgacgccggcggcaacgcgt 362 |||||||||||||||||||||| Sbjct: 32326 gccgacgccggcggcaacgcgt 32305
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gccgaggccgccgtggtgggcc 89 |||||||||||||||||||||| Sbjct: 116615 gccgaggccgccgtggtgggcc 116594
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gccgaggccgccgtggtgggcc 89 |||||||||||||||||||||| Sbjct: 53107 gccgaggccgccgtggtgggcc 53086
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gccgaggccgccgtggtgggcc 89 |||||||||||||||||||||| Sbjct: 117677 gccgaggccgccgtggtgggcc 117656
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ccacgcgcgccggagtgccgcc 109 |||||||||||||||||||||| Sbjct: 14386588 ccacgcgcgccggagtgccgcc 14386609
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 gccgacgccggcggcaacgcgt 362 |||||||||||||||||||||| Sbjct: 28084024 gccgacgccggcggcaacgcgt 28084045
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ccacgcgcgccggagtgccgcc 109 |||||||||||||||||||||| Sbjct: 78391 ccacgcgcgccggagtgccgcc 78412
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gccgaggccgccgtggtgggcc 89 |||||||||||||||||||||| Sbjct: 2129613 gccgaggccgccgtggtgggcc 2129592
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gccgaggccgccgtggtgggc 88 ||||||||||||||||||||| Sbjct: 1930753 gccgaggccgccgtggtgggc 1930733
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gcgccgcgctgctggcggcgt 137 ||||||||||||||||||||| Sbjct: 3477036 gcgccgcgctgctggcggcgt 3477056 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cgacgacggccgacgacacg 253 |||||||||||||||||||| Sbjct: 1388084 cgacgacggccgacgacacg 1388065
>ref|XM_364002.1| Magnaporthe grisea 70-15 hypothetical protein (MG08847.4) partial cds Length = 1845 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tggagcaacgccatgctccag 388 ||||||||||||||||||||| Sbjct: 402 tggagcaacgccatgctccag 382
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gcgccgcgctgctggcggcgt 137 ||||||||||||||||||||| Sbjct: 513271 gcgccgcgctgctggcggcgt 513291 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cgacgacggccgacgacacg 253 |||||||||||||||||||| Sbjct: 2612872 cgacgacggccgacgacacg 2612853
>gb|AC005481.3| Homo sapiens PAC clone RP4-703P8 from 7, complete sequence Length = 118802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 cagcagcaggggccctgagtc 288 ||||||||||||||||||||| Sbjct: 7670 cagcagcaggggccctgagtc 7650
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 cacgcgcgccggagtgccgccccgc 113 |||||||||||||||||||| |||| Sbjct: 870645 cacgcgcgccggagtgccgcgccgc 870621
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccacgcgcgccggagtgccgc 108 ||||||||||||||||||||| Sbjct: 94324 ccacgcgcgccggagtgccgc 94304
>emb|AL158068.18| Human DNA sequence from clone RP11-478C1 on chromosome 4, complete sequence Length = 178338 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tgagaagcagcagcaggggcc 281 ||||||||||||||||||||| Sbjct: 91711 tgagaagcagcagcaggggcc 91691
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 gccgcgctgctggcggcgtcg 139 ||||||||||||||||||||| Sbjct: 5393 gccgcgctgctggcggcgtcg 5413
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 gccgcgctgctggcggcgtcg 139 ||||||||||||||||||||| Sbjct: 290311 gccgcgctgctggcggcgtcg 290331 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcgccgcgctgctggcggcg 136 |||||||||||||||||||| Sbjct: 204553 gcgccgcgctgctggcggcg 204572
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gcgccgcgctgctggcggcgt 137 ||||||||||||||||||||| Sbjct: 321892 gcgccgcgctgctggcggcgt 321912 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgacgacggccgacgacacg 253 |||||||||||||||||||| Sbjct: 1769280 cgacgacggccgacgacacg 1769299
>gb|BC092471.1| Homo sapiens emopamil binding protein-like, mRNA (cDNA clone MGC:104589 IMAGE:4796715), complete cds Length = 947 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctggcggcg 136 ||||||||| ||||||||||||||| Sbjct: 106 gctgtgcgcggcgctgctggcggcg 130
>ref|NM_000956.2| Homo sapiens prostaglandin E receptor 2 (subtype EP2), 53kDa (PTGER2), mRNA Length = 2395 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 779 caatgagaagcagcagcaggg 759
>gb|AY275471.1| Homo sapiens prostaglandin E receptor 2 subtype EP2 (PTGER2) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 625 caatgagaagcagcagcaggg 605
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gctggcggcgtcggcagccgt 147 ||||||||||||||||||||| Sbjct: 4071359 gctggcggcgtcggcagccgt 4071339
>gb|DQ398948.1| Homo sapiens prostaglandin E receptor 2 (subtype EP2), 53kDa (PTGER2) gene, complete cds Length = 18107 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 2714 caatgagaagcagcagcaggg 2694
>gb|AC010851.2| Leishmania major chromosome 22 clone L4134, complete sequence Length = 33339 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 cggcggcatgcttggtgccgacgcc 349 ||||||||| ||||||||||||||| Sbjct: 2409 cggcggcattcttggtgccgacgcc 2385
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccacgcgcgccggagtgccgc 108 ||||||||||||||||||||| Sbjct: 13248075 ccacgcgcgccggagtgccgc 13248055
>gb|BC093929.1| Homo sapiens prostaglandin E receptor 2 (subtype EP2), 53kDa, mRNA (cDNA clone MGC:120964 IMAGE:7939774), complete cds Length = 1213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 678 caatgagaagcagcagcaggg 658
>gb|BC093927.1| Homo sapiens prostaglandin E receptor 2 (subtype EP2), 53kDa, mRNA (cDNA clone MGC:120962 IMAGE:7939772), complete cds Length = 1213 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 678 caatgagaagcagcagcaggg 658
>gb|AE004706.1| Pseudomonas aeruginosa PAO1, section 267 of 529 of the complete genome Length = 11011 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gctgtgcgccgcgctgctggc 132 ||||||||||||||||||||| Sbjct: 9600 gctgtgcgccgcgctgctggc 9580
>emb|AL365475.1|CNS05TF6 Human chromosome 14 DNA sequence BAC R-452D12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187947 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 56610 caatgagaagcagcagcaggg 56630
>gb|AF134201.1|HSPTGER2G1 Homo sapiens prostaglandin E2 receptor EP2 subtype (PTGER2) gene, exon 1 Length = 3875 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 3490 caatgagaagcagcagcaggg 3470
>emb|AL355833.4|CNS05TCS Human chromosome 14 DNA sequence BAC R-262M8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197817 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 113154 caatgagaagcagcagcaggg 113174
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 ccgcgctcgccggcgtcaggatcgc 186 ||||||||||| ||||||||||||| Sbjct: 16101 ccgcgctcgccagcgtcaggatcgc 16125
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ccacgcgcgccggagtgccgc 108 ||||||||||||||||||||| Sbjct: 13255415 ccacgcgcgccggagtgccgc 13255395
>emb|Z68282.1|HSL33C6 Human DNA sequence from clone LA04NC01-33C6 on chromosome 4, complete sequence Length = 29839 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tgagaagcagcagcaggggcc 281 ||||||||||||||||||||| Sbjct: 21955 tgagaagcagcagcaggggcc 21935
>gb|U19487.1|HSU19487 Human prostaglandin E2 receptor mRNA, complete cds Length = 2372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 781 caatgagaagcagcagcaggg 761
>emb|X83868.1|HSEP2PR H.sapiens mRNA for EP2 prostaglandin receptor Length = 1077 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 caatgagaagcagcagcaggg 278 ||||||||||||||||||||| Sbjct: 625 caatgagaagcagcagcaggg 605
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cgacgacggccgacgacacg 253 |||||||||||||||||||| Sbjct: 2139544 cgacgacggccgacgacacg 2139525
>ref|NM_193632.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 408 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 acgacgacggccgacgacacggtc 256 ||||||||||||||||||| |||| Sbjct: 72 acgacgacggccgacgacaaggtc 95
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 agagacggcagctcgacgacgccg 28 ||||||||| |||||||||||||| Sbjct: 78232 agagacggcggctcgacgacgccg 78255
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 gcctctgccggacgatgccgaggc 75 ||||||||| |||||||||||||| Sbjct: 1381290 gcctctgcccgacgatgccgaggc 1381313
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggcgtccggcgccgcagcgcacgg 327 ||||||||||||||| |||||||| Sbjct: 845265 ggcgtccggcgccgccgcgcacgg 845242
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgccgcgctgctggcggcgt 137 |||||||||||||||||||| Sbjct: 243896 cgccgcgctgctggcggcgt 243877
>ref|XM_610301.2| PREDICTED: Bos taurus similar to RAS and EF hand domain containing (LOC531799), mRNA Length = 1227 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 cgtggtgggccacgcgcgccggag 102 ||||||||||||||||| |||||| Sbjct: 572 cgtggtgggccacgcgccccggag 595
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 cgctgtgcgccgcgctgctggcgg 134 ||||||||||||||||| |||||| Sbjct: 3206017 cgctgtgcgccgcgctggtggcgg 3206040
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gcgctgctggcggcgtcggc 141 |||||||||||||||||||| Sbjct: 2716872 gcgctgctggcggcgtcggc 2716853 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gccgaggccgccgtggtggg 87 |||||||||||||||||||| Sbjct: 2491850 gccgaggccgccgtggtggg 2491831
>ref|XM_548400.2| PREDICTED: Canis familiaris hypothetical LOC491279 (LOC491279), mRNA Length = 3549 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cagctgccactgccagccac 210 |||||||||||||||||||| Sbjct: 902 cagctgccactgccagccac 921
>gb|BC041758.1| Xenopus laevis H1 histone family, member X, mRNA (cDNA clone MGC:53643 IMAGE:4884567), complete cds Length = 2269 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agaagcagcagcaggggccc 282 |||||||||||||||||||| Sbjct: 471 agaagcagcagcaggggccc 490
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggcgtccggcgccgcagcgcacgg 327 ||||||||||||||| |||||||| Sbjct: 158851 ggcgtccggcgccgccgcgcacgg 158828
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcgccgcgctgctggcggcg 136 |||||||||||||||||||| Sbjct: 14116 gcgccgcgctgctggcggcg 14135
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcgccgcgctgctggcggcg 136 |||||||||||||||||||| Sbjct: 270896 gcgccgcgctgctggcggcg 270915
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggcgtccggcgccgcagcgcacgg 327 ||||||||||||||| |||||||| Sbjct: 178314 ggcgtccggcgccgccgcgcacgg 178291
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gctgtgcgccgcgctgctgg 131 |||||||||||||||||||| Sbjct: 6327950 gctgtgcgccgcgctgctgg 6327969
>ref|NM_166543.1| Drosophila melanogaster roundabout CG13521-RB, transcript variant B (robo), mRNA Length = 6557 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ggcactgctgccgtgctcct 47 |||||||||||||||||||| Sbjct: 4306 ggcactgctgccgtgctcct 4287
>ref|NM_057551.3| Drosophila melanogaster roundabout CG13521-RA, transcript variant A (robo), mRNA Length = 6384 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ggcactgctgccgtgctcct 47 |||||||||||||||||||| Sbjct: 4133 ggcactgctgccgtgctcct 4114
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ttgccgcgctcgccggcgtc 178 |||||||||||||||||||| Sbjct: 398188 ttgccgcgctcgccggcgtc 398207
>emb|CR523086.1| Gallus gallus finished cDNA, clone ChEST566o18 Length = 793 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ccgctgtgcgccgcgctgct 129 |||||||||||||||||||| Sbjct: 128 ccgctgtgcgccgcgctgct 147
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 agagacggcagctcgacgacgccg 28 ||||||||| |||||||||||||| Sbjct: 20656192 agagacggcggctcgacgacgccg 20656215
>gb|AC008350.4|AC008350 Drosophila melanogaster, chromosome 2R, region 58E-59A, BAC clone BACR11M08, complete sequence Length = 169534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ggcactgctgccgtgctcct 47 |||||||||||||||||||| Sbjct: 90540 ggcactgctgccgtgctcct 90559
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ggcgccgcagcgcacggcgg 330 |||||||||||||||||||| Sbjct: 2287508 ggcgccgcagcgcacggcgg 2287489
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 acgacgacggccgacgacacggtc 256 ||||||||||||||||||| |||| Sbjct: 44340 acgacgacggccgacgacaaggtc 44363
>gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66 of 73 of the complete sequence Length = 302225 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ggcactgctgccgtgctcct 47 |||||||||||||||||||| Sbjct: 101022 ggcactgctgccgtgctcct 101041
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccgccccgctgtgcgccgcgctgctggc 132 |||| |||||| |||||||||||||||| Sbjct: 2896908 ccgcgccgctgcgcgccgcgctgctggc 2896881
>gb|AF040989.1|AF040989 Drosophila melanogaster roundabout 1 (robo1) mRNA, complete cds Length = 6440 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ggcactgctgccgtgctcct 47 |||||||||||||||||||| Sbjct: 4131 ggcactgctgccgtgctcct 4112 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,869,703 Number of Sequences: 3902068 Number of extensions: 2869703 Number of successful extensions: 75163 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71250 Number of HSP's gapped (non-prelim): 3909 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
