ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet07d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
114KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 72 6e-13
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 69 7e-12
3PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 59 7e-09
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 50 2e-06
5XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... 28 8.1

>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 38/72 (52%), Positives = 45/72 (62%)
 Frame = +2

Query: 236 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVLN 415
           D LKLG CA+                   CCSLL GL +LEAAVCLCTA+KAN+LG  LN
Sbjct: 57  DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCTAIKANILGKNLN 114

Query: 416 IPVKLSLLLNYC 451
           +P+ LSL+LN C
Sbjct: 115 LPIALSLVLNNC 126



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = +2

Query: 236 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVLN 415
           D LKL  CA                  ++CC LL GL DL+AA+CLCTA+KANVLGI LN
Sbjct: 51  DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIKANVLGIHLN 105

Query: 416 IPVKLSLLLNYC 451
           +P+ L+ +LN C
Sbjct: 106 VPLSLNFILNNC 117



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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +2

Query: 236 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVLN 415
           D LKLGAC +                   CC LLGGL DL+AA+CLCT ++  +L I + 
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCTTIRLKLLNINII 321

Query: 416 IPVKLSLLLNYC 451
           +P+ L +L++ C
Sbjct: 322 LPIALQVLIDDC 333



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = +2

Query: 317 DKCCSLLGGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYC 451
           D CC+L+GGL D+EA VCLC  L+A  LGI LN+   L L+LN C
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSC 67



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>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase|
           B) (1,4-beta-D-xylan xylanohydrolase B)
          Length = 592

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 11  TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 124
           T SAS  + PG    RT +  C+   L A  F A  AC
Sbjct: 2   TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,948,005
Number of Sequences: 219361
Number of extensions: 297048
Number of successful extensions: 1117
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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