| Clone Name | baet07d01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | 14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor | 72 | 6e-13 | 2 | CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... | 69 | 7e-12 | 3 | PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein | 59 | 7e-09 | 4 | HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... | 50 | 2e-06 | 5 | XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... | 28 | 8.1 |
|---|
>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 72.0 bits (175), Expect = 6e-13 Identities = 38/72 (52%), Positives = 45/72 (62%) Frame = +2 Query: 236 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVLN 415 D LKLG CA+ CCSLL GL +LEAAVCLCTA+KAN+LG LN Sbjct: 57 DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCTAIKANILGKNLN 114 Query: 416 IPVKLSLLLNYC 451 +P+ LSL+LN C Sbjct: 115 LPIALSLVLNNC 126
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 68.6 bits (166), Expect = 7e-12 Identities = 35/72 (48%), Positives = 44/72 (61%) Frame = +2 Query: 236 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVLN 415 D LKL CA ++CC LL GL DL+AA+CLCTA+KANVLGI LN Sbjct: 51 DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIKANVLGIHLN 105 Query: 416 IPVKLSLLLNYC 451 +P+ L+ +LN C Sbjct: 106 VPLSLNFILNNC 117
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 58.5 bits (140), Expect = 7e-09 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = +2 Query: 236 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVLN 415 D LKLGAC + CC LLGGL DL+AA+CLCT ++ +L I + Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCTTIRLKLLNINII 321 Query: 416 IPVKLSLLLNYC 451 +P+ L +L++ C Sbjct: 322 LPIALQVLIDDC 333
>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)| Length = 80 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +2 Query: 317 DKCCSLLGGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYC 451 D CC+L+GGL D+EA VCLC L+A LGI LN+ L L+LN C Sbjct: 26 DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSC 67
>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase| B) (1,4-beta-D-xylan xylanohydrolase B) Length = 592 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +2 Query: 11 TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 124 T SAS + PG RT + C+ L A F A AC Sbjct: 2 TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,948,005 Number of Sequences: 219361 Number of extensions: 297048 Number of successful extensions: 1117 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1117 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)