Clone Information

BLAST Search Result

Clone Name	baet07c11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	42	5e-04
2	UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1....	37	0.013
3	UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	37	0.013
4	UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	37	0.013
5	UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	37	0.013
6	UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	37	0.013
7	FABG_MYCSM (P71534) 3-oxoacyl-[acyl-carrier-protein] reductase (...	37	0.013
8	FABG_MYCTU (P0A5Y4) 3-oxoacyl-[acyl-carrier-protein] reductase (...	35	0.037
9	FABG_MYCBO (P0A5Y5) 3-oxoacyl-[acyl-carrier-protein] reductase (...	35	0.037
10	YFCH_ECOLI (P77775) Hypothetical UPF0105 protein yfcH	35	0.049
11	FABG_MYCAV (O07399) 3-oxoacyl-[acyl-carrier-protein] reductase (...	34	0.083
12	Y1208_HAEIN (P71373) Hypothetical UPF0105 protein HI1208	34	0.083
13	GALE_NEIMA (P56997) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	33	0.18
14	RFBJ_SALMU (Q00329) CDP-abequose synthase (EC 4.2.1.-)	31	0.70
15	GALE_NEIMC (P56986) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	31	0.92
16	GALE_NEIMB (P56985) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	31	0.92
17	NSMA2_RAT (O35049) Sphingomyelin phosphodiesterase 3 (EC 3.1.4.1...	31	0.92
18	NSMA2_MOUSE (Q9JJY3) Sphingomyelin phosphodiesterase 3 (EC 3.1.4...	31	0.92
19	YFHF_BACSU (O31574) Hypothetical UPF0105 protein yfhF	31	0.92
20	ACT3_STRCO (P16544) Putative ketoacyl reductase (EC 1.3.1.-)	31	0.92
21	YTH3_RHOER (P46372) Hypothetical 47.3 kDa protein in thcA 5'regi...	30	1.2
22	YBJT_ECOLI (P75822) Hypothetical protein ybjT	30	1.2
23	DLTE_BACSU (P39577) Protein dltE	30	1.6
24	NAOX_ENTFA (P37061) NADH oxidase (EC 1.6.99.3) (NOXase)	30	1.6
25	TRKA_METTH (O27333) Trk system potassium uptake protein trkA hom...	30	1.6
26	GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)	30	1.6
27	BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated ...	30	2.0
28	IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-)	30	2.0
29	DADA2_RALSO (Q8XX54) D-amino acid dehydrogenase 2 small subunit ...	30	2.0
30	Y1223_SYNY3 (P73467) Hypothetical UPF0105 protein slr1223	30	2.0
31	CAPI_STAAU (P39858) Protein capI	30	2.0
32	YMP3_STRCO (P43168) Hypothetical oxidoreductase in mprA 5'region...	29	2.7
33	HETM_ANASP (P37693) Polyketide synthase hetM	29	2.7
34	DFRA_SYNY3 (P73212) Putative dihydroflavonol-4-reductase (EC 1.1...	29	2.7
35	YJGI_ECOLI (P39333) Hypothetical oxidoreductase yjgI (EC 1.-.-.-)	29	2.7
36	GALE_CORDI (P33119) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	29	3.5
37	PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor...	29	3.5
38	YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'regio...	29	3.5
39	FSTL5_MOUSE (Q8BFR2) Follistatin-related protein 5 precursor (Fo...	28	4.5
40	ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA prote...	28	4.5
41	POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p...	28	4.5
42	PCOR_ECOLI (Q47456) Transcriptional regulatory protein pcoR	28	4.5
43	IFRH_MAIZE (P52580) Isoflavone reductase homolog IRL (EC 1.3.1.-)	28	4.5
44	PKHA4_RAT (P60669) Pleckstrin homology domain-containing family ...	28	4.5
45	YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative s...	28	5.9
46	YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative spl...	28	5.9
47	GRAD_TREPA (O83062) Putative greA-associated domains protein	28	5.9
48	ITB3_MOUSE (O54890) Integrin beta-3 precursor (Platelet membrane...	28	5.9
49	PDZK2_HUMAN (Q86UT5) PDZ domain-containing protein 2 (Intestinal...	28	5.9
50	IF2_MYCTU (P65131) Translation initiation factor IF-2	28	7.8
51	IF2_MYCBO (P65132) Translation initiation factor IF-2	28	7.8
52	CNTP1_RAT (P97846) Contactin-associated protein 1 precursor (Cas...	28	7.8
53	PRIA_LENED (Q01200) Protein priA precursor	28	7.8
54	NU133_HUMAN (Q8WUM0) Nuclear pore complex protein Nup133 (Nucleo...	28	7.8
55	VE2_HPV37 (Q80903) Regulatory protein E2	28	7.8

>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = +1

Query: 106 QNRRRSWQPRGARMQVAAAADSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           QN  RS+  +   ++  +  D K ILI GG  F+G  L+ KL+ +GH+VT+
Sbjct: 68  QNLERSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTV 118

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>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 166 DSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           D K ILI GG  F+G  L+ KL+ +GH+VT+
Sbjct: 87  DRKRILITGGAGFVGSHLTDKLMMDGHEVTV 117

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>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 166 DSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           D K ILI GG  F+G  L+ KL+ +GH+VT+
Sbjct: 87  DRKRILITGGAGFVGSHLTDKLMMDGHEVTV 117

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>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 166 DSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           D K ILI GG  F+G  L+ KL+ +GH+VT+
Sbjct: 87  DRKRILITGGAGFVGSHLTDKLMMDGHEVTV 117

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>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 166 DSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           D K ILI GG  F+G  L+ KL+ +GH+VT+
Sbjct: 87  DRKRILITGGAGFVGSHLTDKLMMDGHEVTV 117

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>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 166 DSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           D K ILI GG  F+G  L+ KL+ +GH+VT+
Sbjct: 85  DRKRILITGGAGFVGSHLTDKLMMDGHEVTV 115

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>FABG_MYCSM (P71534) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)|
           (3-ketoacyl-acyl carrier protein reductase)
          Length = 255

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 15/34 (44%), Positives = 25/34 (73%)
 Frame = +1

Query: 169 SKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRG 270
           S+++L+ GG R IGL ++R+L  +GH+V +  RG
Sbjct: 23  SRSVLVTGGNRGIGLAIARRLAADGHKVAVTHRG 56

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>FABG_MYCTU (P0A5Y4) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)|
           (3-ketoacyl-acyl carrier protein reductase)
          Length = 247

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 14/34 (41%), Positives = 25/34 (73%)
 Frame = +1

Query: 169 SKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRG 270
           S+++L+ GG R IGL ++++L  +GH+V +  RG
Sbjct: 15  SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG 48

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>FABG_MYCBO (P0A5Y5) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)|
           (3-ketoacyl-acyl carrier protein reductase)
          Length = 247

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 14/34 (41%), Positives = 25/34 (73%)
 Frame = +1

Query: 169 SKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRG 270
           S+++L+ GG R IGL ++++L  +GH+V +  RG
Sbjct: 15  SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG 48

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>YFCH_ECOLI (P77775) Hypothetical UPF0105 protein yfcH|
          Length = 297

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 175 NILIMGGTRFIGLFLSRKLVQEGHQVTLFTR 267
           NI+I GGT  IG  L  +L++ GHQ+T+ TR
Sbjct: 2   NIVITGGTGLIGRHLIPRLLELGHQITVVTR 32

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>FABG_MYCAV (O07399) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)|
           (3-ketoacyl-acyl carrier protein reductase)
          Length = 255

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 169 SKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRG 270
           S+++L+ GG R IGL ++++L  E H+V +  RG
Sbjct: 23  SRSVLVTGGNRGIGLAIAQRLAAEAHKVAVTHRG 56

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>Y1208_HAEIN (P71373) Hypothetical UPF0105 protein HI1208|
          Length = 296

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1

Query: 175 NILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAPIT 285
           NIL+ GGT  IG  L  +L     QVT+ TR  +P T
Sbjct: 2   NILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHT 38

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>GALE_NEIMA (P56997) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 172 KNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           KNIL+ GGT FIG      L++ GHQV +
Sbjct: 2   KNILVTGGTGFIGSHTVVSLLKSGHQVVI 30

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>RFBJ_SALMU (Q00329) CDP-abequose synthase (EC 4.2.1.-)|
          Length = 293

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 169 SKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAPITQ 288
           +K IL+ G T F+G  L   L++EG+ +      K PIT+
Sbjct: 5   NKKILMTGATSFVGTHLLHSLIKEGYSIIAL---KRPITE 41

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>GALE_NEIMC (P56986) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 172 KNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           K IL+ GGT FIG      L++ GHQV +
Sbjct: 2   KKILVTGGTGFIGSHTVVSLLKSGHQVVI 30

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>GALE_NEIMB (P56985) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 172 KNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           K IL+ GGT FIG      L++ GHQV +
Sbjct: 2   KKILVTGGTGFIGSHTVVSLLKSGHQVVI 30

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>NSMA2_RAT (O35049) Sphingomyelin phosphodiesterase 3 (EC 3.1.4.12) (Neutral|
           sphingomyelinase 2) (Neutral sphingomyelinase II)
           (nSMase2) (nSMase-2) (Confluent 3Y1 cell-associated
           protein 1)
          Length = 655

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -3

Query: 288 LGYGCLSSGEQCDLVSLLDKFSGQEETNEPGAPHDQNVLGVCSCCHLHSGP 136
           + Y C  +G  C   +L  K +   +      P DQ ++G  +C HLH+ P
Sbjct: 416 VAYHCYPNG--CSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP 464

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>NSMA2_MOUSE (Q9JJY3) Sphingomyelin phosphodiesterase 3 (EC 3.1.4.12) (Neutral|
           sphingomyelinase 2) (Neutral sphingomyelinase II)
           (nSMase2) (nSMase-2)
          Length = 655

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -3

Query: 288 LGYGCLSSGEQCDLVSLLDKFSGQEETNEPGAPHDQNVLGVCSCCHLHSGP 136
           + Y C  +G  C   +L  K +   +      P DQ ++G  +C HLH+ P
Sbjct: 416 VAYHCYPNG--CSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPP 464

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>YFHF_BACSU (O31574) Hypothetical UPF0105 protein yfhF|
          Length = 303

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 175 NILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAPITQQ 291
           NI + GGT F+G  L+  L ++GH V + +R      Q+
Sbjct: 2   NIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNARETEQK 40

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>ACT3_STRCO (P16544) Putative ketoacyl reductase (EC 1.3.1.-)|
          Length = 261

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 157 AAADSKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGK 273
           A  DS+  L+ G T  IGL ++R+L +EG +V +  RG+
Sbjct: 2   ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE 40

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>YTH3_RHOER (P46372) Hypothetical 47.3 kDa protein in thcA 5'region (ORF3)|
          Length = 437

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -1

Query: 209 PMNLVPPMIR-MFLESAAAATCILAPLGCHDRLLFWAEMEMAAPPKS 72
           PM+L+ P+IR + +E AA    ++A    H RLL W E + +A  K+
Sbjct: 92  PMSLIRPVIRKLLVEDAAETGLLIAISDAHGRLL-WVEGDNSAKDKA 137

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>YBJT_ECOLI (P75822) Hypothetical protein ybjT|
          Length = 476

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 172 KNILIMGGTRFIGLFLSRKLVQEGHQVTLFTR 267
           + IL++G + +IG  L R L Q+GHQ+    R
Sbjct: 3   QRILVLGASGYIGQHLVRTLSQQGHQILAAAR 34

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>DLTE_BACSU (P39577) Protein dltE|
          Length = 252

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/40 (32%), Positives = 27/40 (67%)
 Frame = +1

Query: 169 SKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAPITQ 288
           +  +LI GG+  IGL L+++L++ G++V +  R +A + +
Sbjct: 5   NNTVLITGGSAGIGLELAKRLLELGNEVIICGRSEARLAE 44

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>NAOX_ENTFA (P37061) NADH oxidase (EC 1.6.99.3) (NOXase)|
          Length = 446

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 139 ARMQVAAAADSKNILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           A + +  A D+K ++++GG  +IG+ L    V+ G QVTL
Sbjct: 137 ANVIIEKAKDAKRVVVVGGG-YIGIELVEAFVESGKQVTL 175

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>TRKA_METTH (O27333) Trk system potassium uptake protein trkA homolog|
           (K(+)-uptake protein trkA homolog)
          Length = 216

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 178 ILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           ++IMGG R +GL L+  L+ +GH VTL
Sbjct: 3   VVIMGGGR-VGLTLANLLISDGHDVTL 28

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>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)|
          Length = 620

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +2

Query: 62  PPFPTSAARPSPSQPRIGDGHGSR---GGPECRW 154
           PP+P S   P PS   +G G G R   G   CRW
Sbjct: 166 PPYPLSQLPPGPSLGGLGLGLGGRVVAGRQACRW 199

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>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein|
          Length = 653

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
 Frame = +2

Query: 65  PFPTSAARPSPSQPRIGDG-----HGSRGGP 142
           PFP +AA P+PS    G G      G+RGGP
Sbjct: 484 PFPAAAAAPAPSLASPGGGFNDRYFGARGGP 514

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>IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-)|
          Length = 310

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 160 AADSKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTR 267
           A +   IL++GGT +IG FL     + GH      R
Sbjct: 2   ATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVR 37

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>DADA2_RALSO (Q8XX54) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)|
          Length = 425

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 193 GTRFIGLFLSRKLVQEGHQVTLFTRGKAP 279
           G   +G+  +  L QEGHQVTL  R   P
Sbjct: 7   GAGIVGISTAYALAQEGHQVTLVERNPGP 35

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>Y1223_SYNY3 (P73467) Hypothetical UPF0105 protein slr1223|
          Length = 307

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 178 ILIMGGTRFIGLFLSRKLVQEGHQVTLFTR 267
           I++ G T F+G  L   L Q+GH++TL  R
Sbjct: 3   IILTGATGFVGCSLVPLLHQQGHELTLLVR 32

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>CAPI_STAAU (P39858) Protein capI|
          Length = 334

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 178 ILIMGGTRFIGLFLSRKLVQEGHQV 252
           ILI G   FIG  L++KL+++GH V
Sbjct: 3   ILITGTAGFIGSHLAKKLIKQGHYV 27

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>YMP3_STRCO (P43168) Hypothetical oxidoreductase in mprA 5'region (EC 1.-.-.-)|
           (ORF3)
          Length = 251

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +1

Query: 157 AAADSKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAPITQQ 291
           A+   +++L++GGT  IGL  +R+L+  G ++       +P  ++
Sbjct: 5   ASGPPRSLLVLGGTSAIGLATARRLIARGARLVHLAARPSPALEK 49

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>HETM_ANASP (P37693) Polyketide synthase hetM|
          Length = 506

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 130 PRGARMQVAAAADSKNILIMGGTRFIGLFLSRKLVQE 240
           P GA          K + + GGT F+G FL R+L+Q+
Sbjct: 121 PGGAIPVDFPVTQPKKVFLTGGTGFLGAFLIRELLQQ 157

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>DFRA_SYNY3 (P73212) Putative dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 343

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 184 IMGGTRFIGLFLSRKLVQEGHQVTLFTRGKA 276
           + GGT F+G  L R L+++G+QV    R  +
Sbjct: 15  VTGGTGFVGANLVRHLLEQGYQVRALVRASS 45

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>YJGI_ECOLI (P39333) Hypothetical oxidoreductase yjgI (EC 1.-.-.-)|
          Length = 237

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 160 AADSKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAPITQQL 294
           A   K +LI+GG+R IG  + R+ V +G  V     G     ++L
Sbjct: 3   AFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRL 47

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>GALE_CORDI (P33119) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 328

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +1

Query: 178 ILIMGGTRFIGLFLSRKLVQEGHQVTL 258
           +L+ GG  ++G   S  L+++GH+VT+
Sbjct: 3   LLVTGGAGYVGSVCSTVLLEQGHEVTI 29

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>PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor A-interacting|
           complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent
           helicase PRIC285) (PPAR-alpha-interacting complex
           protein 285) (PPAR-gamma DBD-interacting protein 1)
           (PDIP1)
          Length = 2649

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = -1

Query: 257 NVTWCPSWTSFLDRKRPMNLVPPMIRMFLESAAAATCILAPLGCHDRLLFWAEMEMAA 84
           N+ + P    + +   P +L+P   + FL   A +T ++AP+   D  +F   +E  A
Sbjct: 382 NMLFAPPGALYAEVPVPSSLMPDTDQGFLLGRAVSTALVAPVPAPDNTVFEVRLERRA 439

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>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)|
          Length = 334

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 181 LIMGGTRFIGLFLSRKLVQEGHQV 252
           L+ G   FIG  +S++L++ GHQV
Sbjct: 4   LVTGAAGFIGFHVSKRLLEAGHQV 27

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>FSTL5_MOUSE (Q8BFR2) Follistatin-related protein 5 precursor (Follistatin-like|
           5) (m-D/Bsp120I 1-2)
          Length = 847

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = -1

Query: 197 VPPMIRMFLESAAAATCILAPLGCH-----DRLLFWAEMEMAAPPK 75
           VPP+IR++ ES A    + A L CH     D  L W +  +   PK
Sbjct: 339 VPPVIRVYPESQAREPGVTASLRCHAEGIPDPQLGWLKNGIDITPK 384

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>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 662

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 136 GARMQVAAAADSKN--ILIMGGTRFIGLFLSRKLVQEG 243
           GAR++ AA +  +   +LI+G   FIG  LS +L+++G
Sbjct: 304 GARLRGAACSPQRRTRVLILGVNGFIGNHLSERLLRDG 341

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>POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3017

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 191  GAPGSLVSSCPENLSRRDTRSHCSPEERHP 280
            G+P SL SS    LS    R+ C+  ++HP
Sbjct: 2196 GSPPSLASSSANQLSAPSLRATCTTSQKHP 2225

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>PCOR_ECOLI (Q47456) Transcriptional regulatory protein pcoR|
          Length = 226

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 172 KNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGK 273
           + ILI+   +  G +L + LV+EG+Q  LF  G+
Sbjct: 2   QRILIVEDEQKTGRYLQQGLVEEGYQADLFNNGR 35

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>IFRH_MAIZE (P52580) Isoflavone reductase homolog IRL (EC 1.3.1.-)|
          Length = 309

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 160 AADSKNILIMGGTRFIGLFLSRKLVQEGHQVTLFTRGKAP 279
           A++   IL++GGT ++G  +     + GH  +   R  AP
Sbjct: 2   ASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAP 41

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>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 16/83 (19%)
 Frame = +2

Query: 92  SPSQPRIGDGHGSRGGPECRWQQLQTPRTF*S--------------WGAPGSLVSSCPEN 229
           SP++PR G+G G  GGP     + +  RT  S                APGS     P+ 
Sbjct: 164 SPARPRPGEGPGGPGGPP-EVNRREEGRTSESPEVAPLSRGPGRHEMHAPGSSADLQPDT 222

Query: 230 LSRRDTRS--HCSPEERHP*PSS 292
            SRR TRS    SP  R P P S
Sbjct: 223 WSRR-TRSPEPFSPLSRPPSPLS 244

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>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor|
           YT521)
          Length = 727

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 RLQEHSDHGGHQVHWSLP 218
           RL   S HGG  +HW LP
Sbjct: 414 RLSSESHHGGSPIHWVLP 431

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>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor|
           YT521) (RA301-binding protein)
          Length = 738

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 165 RLQEHSDHGGHQVHWSLP 218
           RL   S HGG  +HW LP
Sbjct: 417 RLSSESHHGGSPIHWVLP 434

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>GRAD_TREPA (O83062) Putative greA-associated domains protein|
          Length = 657

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 150 GGSSCRLQEHSDHGGHQVHWSLPVQKTCPGGTP 248
           G  SC L ++S        W+L + K+  GGTP
Sbjct: 609 GSRSCALPQNSGLSSSSTLWTLLIGKSLTGGTP 641

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>ITB3_MOUSE (O54890) Integrin beta-3 precursor (Platelet membrane glycoprotein|
           IIIa) (GPIIIa) (CD61 antigen)
          Length = 787

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +2

Query: 95  PSQPRIGDGHGSRGGPECRWQQLQTPRTF*SWGAPGSLVSSCPENLSRRDTRSHCSPEER 274
           PS PR  +G+G+     CR  Q          G  GS+   C E   R   +  CSP+E 
Sbjct: 468 PSSPRCNNGNGTFECGVCRCDQ----------GWLGSM-CECSEEDYRPSQQEECSPKEG 516

Query: 275 HP 280
            P
Sbjct: 517 QP 518

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>PDZK2_HUMAN (Q86UT5) PDZ domain-containing protein 2 (Intestinal and|
           kidney-enriched PDZ protein) (DLNB27 protein)
          Length = 571

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
 Frame = +1

Query: 73  DFGGAAISISAQNRRRSWQ--PRGARMQVAAAADSKNILIMGGT---RFIGLFLSRKLVQ 237
           D GG   S++  N+   W     G   + A       +L + G    +F    L+RKL Q
Sbjct: 229 DEGGFGFSVTHGNQGPFWLVLSTGGAAERAGVPPGARLLEVNGVSVEKFTHNQLTRKLWQ 288

Query: 238 EGHQVTLFTRG 270
            G QVTL   G
Sbjct: 289 SGQQVTLLVAG 299

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>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 65  PFPTSAARPSPSQPRIGDGHGSRGGPECRWQQLQTPR 175
           P P +A  PSP  P  G   G+R GP  +   ++TPR
Sbjct: 116 PEPPTAVPPSPQAPHPGMAPGARPGPVPK-PGIRTPR 151

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>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 65  PFPTSAARPSPSQPRIGDGHGSRGGPECRWQQLQTPR 175
           P P +A  PSP  P  G   G+R GP  +   ++TPR
Sbjct: 116 PEPPTAVPPSPQAPHPGMAPGARPGPVPK-PGIRTPR 151

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>CNTP1_RAT (P97846) Contactin-associated protein 1 precursor (Caspr) (Caspr1)|
            (Neurexin 4) (Neurexin IV) (p190) (Paranodin)
          Length = 1381

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 231  KFSGQEETNEPGAPHDQNVLGVCSCCHLHSGPPRLP*PSP 112
            ++ G   TNEP A HD +  G        SGP + P P+P
Sbjct: 1311 RYKGSYHTNEPKATHDSHPGGKAPL--PPSGPAQAPAPTP 1348

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>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/61 (29%), Positives = 24/61 (39%)
 Frame = +2

Query: 56  CLPPFPTSAARPSPSQPRIGDGHGSRGGPECRWQQLQTPRTF*SWGAPGSLVSSCPENLS 235
           CLP +PTS   P+PS       H S   P         P+    W    SL+   P + S
Sbjct: 92  CLPKWPTSTPTPTPSSAHHTSTHTS---PSSTPTSTPPPQCSNGWDWISSLLCCTPSSPS 148

Query: 236 R 238
           +
Sbjct: 149 K 149

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>NU133_HUMAN (Q8WUM0) Nuclear pore complex protein Nup133 (Nucleoporin Nup133)|
           (133 kDa nucleoporin)
          Length = 1156

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 83  ARPSPSQPRIGDGHGSRGGPECRWQQLQTPRTF*SWGAP-GSLVSS 217
           A PSP  P    G GSR GP        TPRT    G P GS VSS
Sbjct: 4   AAPSPRTP----GTGSRRGPLAGLGPGSTPRTASRKGLPLGSAVSS 45

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>VE2_HPV37 (Q80903) Regulatory protein E2|
          Length = 454

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 77  SAARPSPSQPRIGDGHGSRGGPECRWQQLQTPRT 178
           S +R + S P  G G  SRGGPE R Q     R+
Sbjct: 293 SYSRDTSSSPDRGRGGRSRGGPETRSQSRSLSRS 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,601,978
Number of Sequences: 219361
Number of extensions: 1193017
Number of successful extensions: 4455
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 4224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4451
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result