| Clone Name | baet07b05 |
|---|---|
| Clone Library Name | barley_pub |
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 35.4 bits (80), Expect = 0.056 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLE--- 215 ER + SR + + Q + E+ GSRH+ R EA + H VG GQ Sbjct: 1850 ERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHSQVGQGQSSGPR 1909 Query: 214 -VSNRLSALRQNQMLGDHG-DGRRWRARANQ 128 N+ S++ Q+ H D RW A++ Sbjct: 1910 TSRNQGSSVSQDSDSQGHSEDSERWSGSASR 1940 Score = 32.3 bits (72), Expect = 0.48 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 5/90 (5%) Frame = -2 Query: 382 RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSNR 203 R + SR + + + E GSRH+ R EA + H G GQ E S Sbjct: 879 RSDASRGQSGSRSASRTTRNEEQSRDGSRHSGSRHHEASSHADISRHSQAGQGQSEGSRT 938 Query: 202 -----LSALRQNQMLGDHGDGRRWRARANQ 128 S + + G D RW A++ Sbjct: 939 SRRQGSSVSQDSDSEGHSEDSERWSGSASR 968 Score = 30.8 bits (68), Expect = 1.4 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 8/83 (9%) Frame = -2 Query: 352 HPERAGQRQQERLDEA---GSRHARGREEEALLNVVAREHGHVGDGQLE----VSNRLSA 194 H +Q R DE GSRH+ R EA + H VG GQ E N S+ Sbjct: 2507 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 2566 Query: 193 LRQNQMLGDHG-DGRRWRARANQ 128 Q+ H D RW A++ Sbjct: 2567 FSQDSDSQGHSEDSERWSGSASR 2589 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 5/90 (5%) Frame = -2 Query: 382 RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLE---- 215 R + S + + Q + E G+RH+ R EA + H VG GQ Sbjct: 554 RSDASHGQSGSRSASRQTRNEEQSGDGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRT 613 Query: 214 VSNRLSALRQNQMLGDHG-DGRRWRARANQ 128 N+ S++ Q+ H D RW A++ Sbjct: 614 SRNQGSSVSQDSDSQGHSEDSERWSGSASR 643 Score = 28.1 bits (61), Expect = 9.0 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Frame = -2 Query: 382 RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ----LE 215 R + SR + + Q + + GSRH+ EA + H G GQ Sbjct: 3472 RSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRT 3531 Query: 214 VSNRLSALRQNQMLGDHG-DGRRWRARANQ 128 N+ S++ Q+ H D RW A++ Sbjct: 3532 SRNQGSSVSQDSDSQGHSEDSERWSGSASR 3561
>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H| antigen) Length = 2115 Score = 33.9 bits (76), Expect = 0.16 Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = -2 Query: 388 GERDEP-SRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEV 212 GE+ E SRE K P RAG RQ E L+E R + +A L + RE +G+ +LE Sbjct: 927 GEQQETASRELVKEPARAGDRQPEWLEEQQGR--QFCSTQAALQAMEREAEQMGN-ELER 983 Query: 211 SNRLSALRQNQMLGDHGDGRRWRARANQ 128 Q Q + G R AR Q Sbjct: 984 LRAALMESQGQQQEERGQQEREVARLTQ 1011
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2| Length = 185 Score = 33.5 bits (75), Expect = 0.21 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Frame = -2 Query: 388 GERDEPSRERRKHPERAGQRQQERLDE----AGSRHARGREEEALLNVVA-REHGHVGDG 224 G E R+R + ER +RQ+ER E + RGRE E A ++ G G Sbjct: 94 GREREAERQRGREAEREAERQRERQRERQRGREAERQRGREAERQRGREAEKQRGERQRG 153 Query: 223 ---QLEVSNRLSALRQNQMLGDHGDGRRWRAR 137 + E R +RQ + G G+R R R Sbjct: 154 REVEAEAEGRGRGMRQEAEATEQGQGQRQRQR 185
>CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2336 Score = 32.7 bits (73), Expect = 0.37 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = -2 Query: 388 GERDEPSRERRKHPERA-GQRQQERLDEAGSRHARGREEEALLNVVAREHGH 236 G R+E +R RR H + A G Q R + + H RG EEA R H Sbjct: 885 GAREERARPRRSHSKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAH 936
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 32.3 bits (72), Expect = 0.48 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = -2 Query: 412 APDDDAVVGERDEPSRER-RKHPERAGQRQQERLDEAGSRHARGREEEALLNVVA-REHG 239 A +D V +RDE RER R+ ER +R++E+ E + +E E + V +E G Sbjct: 552 ASQEDEVKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSVKDKEKG 611 Query: 238 HVGDGQLEVSNRLSALR 188 DG+ + + + L+ Sbjct: 612 KHDDGRKKEAEIIKQLK 628
>GLMM_SILPO (Q5LTP9) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 448 Score = 32.3 bits (72), Expect = 0.48 Identities = 30/100 (30%), Positives = 45/100 (45%) Frame = -2 Query: 316 LDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRAR 137 +D+ G+ A G + ALL G + G L V+ +S L + LGD G G A Sbjct: 250 IDQLGNV-ADGDQIMALLAARWAAEGRLQGGAL-VATVMSNLGLERFLGDRGIGLERTAV 307 Query: 136 ANQLVXXXXXXXXRSLHHDVGGDQRSHLNWSGFCSLGDGV 17 ++ V +L GG+Q H+ S F + GDG+ Sbjct: 308 GDRYVVERMREGGFNL----GGEQSGHIVMSDFATTGDGL 343
>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2327 Score = 32.0 bits (71), Expect = 0.62 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -2 Query: 388 GERDEPSRERRKH-PERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGH 236 G R+E +R RR H E G Q R + + H RG EEA R H Sbjct: 879 GAREERARPRRSHSKETPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAH 930
>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1268 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 8/45 (17%) Frame = -1 Query: 206 PAERPPAEPDAWRPRRWSALARSRKPVGLAR--------PWTGPA 96 PAE PA+ P RWS R K G + PW GPA Sbjct: 1060 PAEYSPAQAQCLIPERWSTPQRDVKCAGASEERTACVWGPWAGPA 1104
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 31.2 bits (69), Expect = 1.1 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 13/100 (13%) Frame = -2 Query: 412 APDDDAVVGERDEPSR--ERRKHPERAGQRQQERLDEAGSRH-ARGREEEALLNVVARE- 245 AP +A+ EP+ R+ R G + L AG R RG + A + + R Sbjct: 1986 APSPEALPSPGQEPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHKAASVELPQRRS 2045 Query: 244 ---------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGR 152 G +G+G E + RL ALRQ + G DG+ Sbjct: 2046 PGPGATRLARGGLGEG--EYAQRLQALRQRLLRGGPEDGK 2083
>DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 1) Length = 707 Score = 31.2 bits (69), Expect = 1.1 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = -2 Query: 397 AVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQL 218 A+ E D + E++K ER ++QQ+ L + E+ L+ +R + +GQL Sbjct: 625 ALHAELDRRASEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQL 684 Query: 217 EVSNRLSALRQNQMLGDHGDGRRWRA 140 +S S+ + LG+ G R A Sbjct: 685 VLS---SSQSEESDLGEEGKKRESEA 707
>TRHY_RABIT (P37709) Trichohyalin| Length = 1407 Score = 30.8 bits (68), Expect = 1.4 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Frame = -2 Query: 421 RVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARG---REEEALLNVVA 251 R + ++ + E E RER + Q QER +E R R REEE LL Sbjct: 934 RKLREEEQLLRREEQELRRERARKLREEEQLLQEREEERLRRQERARKLREEEQLLRREE 993 Query: 250 REHGHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRARANQL 125 +E D + +L R+ + L R++R QL Sbjct: 994 QELRQERDRKFREEEQLLQEREEERLRRQERDRKFREEERQL 1035 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSN 206 +R+E + RR+ ER + +E E R + REEE LL E + + ++ Sbjct: 573 QREEDEKRRRQERERQYRELEELRQEEQLRDRKLREEEQLLQEREEERLRRQERERKLRE 632 Query: 205 RLSALRQNQ 179 LRQ + Sbjct: 633 EEQLLRQEE 641 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEV-- 212 E ++ RERR+ ERA Q ++E+L R R REE + RE + + + + Sbjct: 220 EEEQQRRERREQHERALQEEEEQL----LRQRRWREEPREQQQLRRELEEIREREQRLEQ 275 Query: 211 -SNRLSALRQNQML 173 R LR+ Q L Sbjct: 276 EERREQQLRREQRL 289
>CHEB3_RHOSH (O33558) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 369 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Frame = +2 Query: 11 LCDAIAERAEAT---------PVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPT-PTI 160 +CDAI E T P+ P +TAD ++ A P + +VC A T T Sbjct: 129 ICDAIRAATETTRRRSQPEPRPLAPGPKLTADEILPARPPRPVPETMPVVCIGASTGGTE 188 Query: 161 AVVSKHLVLPEGAQPV 208 A+ LP A P+ Sbjct: 189 ALRDVLTALPASAPPI 204
>CHEB1_RHOS4 (Q3J653) Chemotaxis response regulator protein-glutamate| methylesterase 1 (EC 3.1.1.61) Length = 369 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Frame = +2 Query: 11 LCDAIAERAEAT---------PVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPT-PTI 160 +CDAI E T P+ P +TAD ++ A P + +VC A T T Sbjct: 129 ICDAIRAATETTRRRSQPEPRPLAPGPKLTADEILPARPPRPVPETMPVVCIGASTGGTE 188 Query: 161 AVVSKHLVLPEGAQPV 208 A+ LP A P+ Sbjct: 189 ALRDVLTALPASAPPI 204
>RS3_CORJK (Q4JT53) 30S ribosomal protein S3| Length = 247 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -2 Query: 424 GRVVAPDDDAVVGERDE-PSRERRKHPERAGQRQQ 323 G VV ++++ RDE PSR RR+ P R G R+Q Sbjct: 205 GDVVGGRRESLMNARDERPSRGRRERPRRGGARRQ 239
>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 30.4 bits (67), Expect = 1.8 Identities = 23/85 (27%), Positives = 32/85 (37%) Frame = -2 Query: 424 GRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVARE 245 G+ V + G+R E R +H Q+ +E+ S+H G + E R Sbjct: 123 GQAVGAHRQSGAGQRHEQRSSRGQHGSGYYYEQEHSEEESDSQHQHGHQHEQ-----QRG 177 Query: 244 HGHVGDGQLEVSNRLSALRQNQMLG 170 H H Q E S RQ Q G Sbjct: 178 HQHQHQHQHEHEQPESGHRQQQSSG 202
>MYS_PODCA (Q05000) Myosin heavy chain (Fragment)| Length = 692 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/75 (32%), Positives = 33/75 (44%) Frame = -2 Query: 400 DAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ 221 D + E+DE RK+ QRQ E L +R + E+ L + Q Sbjct: 312 DRKLSEKDEELEGLRKNH----QRQMESLQNTIDSESRSKAEQQKLRKKYDADMMELESQ 367 Query: 220 LEVSNRLSALRQNQM 176 LE SNR++A Q QM Sbjct: 368 LESSNRVAAESQKQM 382
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 30.4 bits (67), Expect = 1.8 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -2 Query: 400 DAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEE 272 D V RDE +RER + ER +R++ER E + RE E Sbjct: 666 DRVDDRRDERARERDRERERDRERERERERERDREREKERELE 708 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEE 272 ER+ RER + ER +R++ER E + RE + Sbjct: 750 EREREERERERERERERERERERERERARERDKERERQ 787
>IF2_BURS3 (Q39H30) Translation initiation factor IF-2| Length = 972 Score = 30.0 bits (66), Expect = 2.4 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 13/72 (18%) Frame = -2 Query: 421 RVVAPDDDAVVGERDEPSR-----------ERRKHPERAGQRQQER--LDEAGSRHARGR 281 +V DDDA + R+E +R E R+ ER + + ER +EA R Sbjct: 112 QVAEADDDAELKRREEEARREADLLEKQAQELRERQERLEREEAERRAREEAAEAERRRA 171 Query: 280 EEEALLNVVARE 245 EEEA VA E Sbjct: 172 EEEAAAKRVAAE 183
>AN32E_MOUSE (P97822) Acidic leucine-rich nuclear phosphoprotein 32 family| member E (LANP-like protein) (LANP-L) (Cerebellar postnatal development protein 1) Length = 260 Score = 29.6 bits (65), Expect = 3.1 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%) Frame = -2 Query: 406 DDDAVVGERDEPSRERRKH--PERAGQRQQERLDEAGSRHARGREEEALLNVVARE---- 245 DDD G+ DE + + PE + + + DEAGS G EE L ++ E Sbjct: 162 DDDDEDGDEDEEDEDEDEAGPPEGYEEEEDDDEDEAGSEVGEGEEEVGLSYLMKDEIQDE 221 Query: 244 ---HGHVGDGQLEVSNRLSALRQNQMLGDHGD 158 +V +G+ E LR + D D Sbjct: 222 EDDDDYVDEGEEEEEEEEEGLRGEKRKRDAED 253
>V120_EHV1V (P84405) Capsid assembly protein 23| Length = 1020 Score = 29.6 bits (65), Expect = 3.1 Identities = 29/123 (23%), Positives = 44/123 (35%) Frame = +2 Query: 17 DAIAERAEATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEG 196 D + A ++P + D AP P+MA N L ++ V + L+ PE Sbjct: 640 DGYRTKLTAIIASVSPFLQKD-----APTPTMAHANNLEALLGELHSVVVAAIALI-PER 693 Query: 197 AQPVGDLKLSVSDMPMLSCHYIQKGLFFTPAGMPTARLVKXXXXXXXRALGVFPALAGRL 376 A ++ V + P + GLF T LV LG + + Sbjct: 694 A------RMPVPERPSVKTSTFLAGLFLTAVYKRLETLVGHTAELTNNILGTASGIVSSI 747 Query: 377 VTL 385 VTL Sbjct: 748 VTL 750
>V120_EHV1B (P28956) Capsid assembly protein 23| Length = 1020 Score = 29.6 bits (65), Expect = 3.1 Identities = 29/123 (23%), Positives = 44/123 (35%) Frame = +2 Query: 17 DAIAERAEATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEG 196 D + A ++P + D AP P+MA N L ++ V + L+ PE Sbjct: 640 DGYRTKLTAIIASVSPFLQKD-----APTPTMAHANNLEALLGELHSVVVAAIALI-PER 693 Query: 197 AQPVGDLKLSVSDMPMLSCHYIQKGLFFTPAGMPTARLVKXXXXXXXRALGVFPALAGRL 376 A ++ V + P + GLF T LV LG + + Sbjct: 694 A------RMPVPERPSVKTSTFLAGLFLTAVYKRLETLVGHTAELTNNILGTASGIVSSI 747 Query: 377 VTL 385 VTL Sbjct: 748 VTL 750
>TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF-responsive| element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP) (AR1) Length = 1960 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +2 Query: 98 PAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQPVGDLKLSVSDMPMLS 250 P+P+ +V+ C+S P+P + ++L +G+ P+G + MP LS Sbjct: 370 PSPAASVVQSPSCSSTPSP-LMQTGENLQCGQGSVPMGSRNRILQLMPQLS 419
>RFC1_YEAST (P38630) Activator 1 95 kDa subunit (Replication factor C subunit| 1) (Replication factor C1) (Cell division control protein 44) Length = 861 Score = 29.6 bits (65), Expect = 3.1 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Frame = -3 Query: 396 RSSGSVTSRPASAGNT-PSARDSDSKSDLTRR-------AVGMPAGVKKRPF*M*WHESM 241 R + S T +PAS+ T PS++ SDS S++T + ++ + K + + Sbjct: 76 RKASSPTVKPASSKKTKPSSKSSDSASNITAQDVLDKIPSLDLSNVHVKENAKFDFKSAN 135 Query: 240 GMSETDSLRSPTG*APSGRTRCLETTAMVGVGAL 139 ++ D + S G P G+ CL +V G L Sbjct: 136 SNADPDEIVSEIGSFPEGKPNCLLGLTIVFTGVL 169
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 29.3 bits (64), Expect = 4.0 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = -2 Query: 376 EPSRERRKHPERAGQRQQERLDEAGSRHARGREEEA 269 E RER K ++ ++++E ++ +H GR++EA Sbjct: 597 EKEREREKQKQKESEKERESKEKEKGKHEDGRKKEA 632 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/94 (24%), Positives = 38/94 (40%) Frame = -2 Query: 421 RVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREH 242 R + + V RDE RER + +R++ER E R +E+E +E Sbjct: 551 RAASEEASEVKARRDEEERERERR-----EREREREKEKEKEREREKEKE-------KEK 598 Query: 241 GHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRA 140 + Q + + + + G H DGR+ A Sbjct: 599 EREREKQKQKESEKERESKEKEKGKHEDGRKKEA 632
>TNNI_CHLNI (Q7M3Y3) Troponin I (TnI)| Length = 292 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEA 269 +R E R+RR+ +R Q ++ERL R + REEEA Sbjct: 90 QRQEEERQRREEEQRRQQEEEERL--RLEREEQEREEEA 126
>DP13A_HUMAN (Q9UKG1) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 1) Length = 709 Score = 29.3 bits (64), Expect = 4.0 Identities = 22/86 (25%), Positives = 40/86 (46%) Frame = -2 Query: 397 AVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQL 218 A+ E D + E++K ER ++QQ+ L++ E+ L+ +R + +GQ Sbjct: 626 ALHAELDRRASEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSEGQF 685 Query: 217 EVSNRLSALRQNQMLGDHGDGRRWRA 140 V + S+ + LG+ G R A Sbjct: 686 VVLS--SSQSEESDLGEGGKKRESEA 709
>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130| (Serine-arginine-rich splicing regulatory protein 130) (SRrp130) (SR-rich protein) (SR-related protein) Length = 805 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -2 Query: 373 PSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ 221 PSRERR+ R+ R+ R + SR R + ++ N+ H H G+ + Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRR-KIDDQRGNLSGNSHKHKGEAK 661
>TRH_ONCNE (Q8QFQ9) Thyroliberin type A precursor [Contains: Prothyroliberin| type A; Thyroliberin (Thyrotropin-releasing hormone) (TRH) (Thyrotropin-releasing factor) (TRF) (TSH-releasing factor) (Protirelin)] Length = 258 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 388 GERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREE---EALLNVVAREH 242 G+R + E+R+HP + + + E DE R G+ E ++ + + R+H Sbjct: 81 GKRYQEELEKRQHPGKREEDEDEDYDEVQKRQHPGKREDEFDSFVELQRRQH 132
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.9 bits (63), Expect = 5.3 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 18/109 (16%) Frame = -2 Query: 424 GRVVAPDDDAVVGE------RDEPSRERRKHPE-RAGQRQQERLDEAGSRH-ARGREEEA 269 GR + D +A E ++ P + PE R G + L GSR R + A Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELRRGSSAESALPRVGSREPGRSLHKAA 2041 Query: 268 LLNVVARE----------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGR 152 + + R G +G+G E + RL ALRQ + G DG+ Sbjct: 2042 SVELPQRRSPSPGATRLTRGGLGEG--EYAQRLQALRQRLLRGGPEDGK 2088
>TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-kappa-B p65| subunit) Length = 551 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 95 APAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQP 205 APAP+ A+++ L A AP P +A V P +P Sbjct: 392 APAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKP 428
>GLB1_MAIZE (P15590) Globulin-1 S allele precursor (GLB1-S) (7S-like)| Length = 573 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = -2 Query: 385 ERDEPSRERRK----HPERAGQRQQERLDEAGS-RHARGREEE 272 E++E RE R ER G+ ++E+ +E RH RGR EE Sbjct: 518 EQEEEEREERHGGRGERERHGREEREKEEEEREGRHGRGRREE 560
>RPC1_YEAST (P04051) DNA-directed RNA polymerase III largest subunit (EC| 2.7.7.6) (C160) Length = 1460 Score = 28.5 bits (62), Expect = 6.9 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 26/125 (20%) Frame = -2 Query: 418 VVAPDDDAVVGERDEPSRERR--KHPERAGQRQQERLDEA---------GSRHARGREEE 272 V++PD + + E P R + +PE+ + + +L E G+ + R E+ Sbjct: 380 VISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGANYLLKRNED 439 Query: 271 ALLNV-------VARE-------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRA-R 137 A N+ +A+ H+ DG + + NR +L + +L + R WR R Sbjct: 440 ARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYAKIRPWRTFR 499 Query: 136 ANQLV 122 N+ V Sbjct: 500 LNECV 504
>NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 699 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -3 Query: 423 AASSHRMTMRSSGSVTSRPASAGNTPSARDSDSKSDLTRRAVGMPAGVKKRP 268 A + + T +++ S+ ++ A G+ S+ DSDS S + VKK+P Sbjct: 443 ATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKP 494
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -2 Query: 382 RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHV 233 R+E RE+ K ER +R++ER E ++ + E L + GH+ Sbjct: 1171 REEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1220
>TWST1_CALJA (Q8MIH1) Twist-related protein 1| Length = 203 Score = 28.5 bits (62), Expect = 6.9 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = -2 Query: 415 VAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 302 V+P DD++ +EP R++ + +R G++++ AG Sbjct: 10 VSPADDSLSNSEEEPDRQQPQSGKRGGRKRRSSRRSAG 47
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.5 bits (62), Expect = 6.9 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 13/100 (13%) Frame = -2 Query: 412 APDDDAVVGERDE-PSRERRKHPE-RAGQRQQERLDEAGSRH-ARGREEEALLNVVARE- 245 AP +A+ E P + PE R G + L GSR R + A + + R Sbjct: 1991 APSPEALPSPGQESPDGPSPRRPELRRGSSAESALPRVGSREPGRSLHKAASVELPQRRS 2050 Query: 244 ---------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGR 152 G +G+G E + RL ALRQ + G DG+ Sbjct: 2051 PSPGATRLTRGGLGEG--EYAQRLQALRQRLLRGGPEDGK 2088
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 382 RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLN 260 R+E RE+ K ER +R++ER E ++ A E L+ Sbjct: 1171 REEREREKEKEKEREREREREREAERAAQKASSSAHEGRLS 1211
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -2 Query: 382 RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHV 233 R+E RE+ K ER +R++ER E ++ + E L + GH+ Sbjct: 1179 REEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1228
>GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-binding| domain-containing protein 3) (Golgi phosphoprotein 1) (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1) (PBR- and PKA-associated protein 7) (Peripherial benzodiazepine receptor-asso Length = 527 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSN 206 E++E ++R++ ER + ++ER R REEE L E + + +L + Sbjct: 181 EKEEQEKKRKEEEERRRREEEERERLQKEEEKRRREEEERLRREEEERRRIEEERLRLEQ 240 Query: 205 R 203 + Sbjct: 241 Q 241
>HES5_MOUSE (P70120) Transcription factor HES-5 (Hairy and enhancer of split 5)| Length = 167 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 7/40 (17%) Frame = -1 Query: 206 PAERPPAEPDAWRPRRWS------ALARSRKPV-GLARPW 108 PA+ PPA A +P R S A++ SR+P GL RPW Sbjct: 128 PAKEPPAPGAAPQPARSSAKAAAAAVSTSRQPACGLWRPW 167
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 28.1 bits (61), Expect = 9.0 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -2 Query: 406 DDDAVVGERDEPSRER-RKHPERAGQRQQERLDEAGSRHARGREEEALLNVVA-REHGHV 233 D + + +RDE RER R+ ER +R++E+ E + +E E + +E G Sbjct: 556 DANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKEKGKH 615 Query: 232 GDGQLEVSNRLSALR 188 DG+ + + + L+ Sbjct: 616 DDGRKKEAEIIKQLK 630
>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B| subunit (Voltage-gated calcium channel alpha subunit Cav2.2) (DOE-4) Length = 2326 Score = 28.1 bits (61), Expect = 9.0 Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 11/57 (19%) Frame = -2 Query: 379 DEPSRERRKH-PERAGQRQQERLDEA--GSRHAR--------GREEEALLNVVAREH 242 D P RE R+H R G QQ R G RH+R GRE EA V+R H Sbjct: 921 DAPEREHRRHRSHRHGTEQQHREANGTKGERHSRAKDGSRSGGREGEA----VSRSH 973
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -2 Query: 385 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREE 275 ERD +RERR+ R+ +R + R E SR + G + Sbjct: 924 ERDNSNRERREWGRRSPERDRHRDLEERSRRSSGHRD 960
>NOLB_RHIFR (P33208) Nodulation protein nolB| Length = 164 Score = 28.1 bits (61), Expect = 9.0 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = +2 Query: 17 DAIAERAEATPVKMAPLITADVVVEAAP-APSMAVLNQLVCASAPTPTIAVVSKH--LVL 187 D++ +TPV+ AP+ V AAP +P + Q + A P +A + + L Sbjct: 35 DSMKNDTASTPVRTAPISPPMDVHRAAPTSPLKDRVLQTISAICPDSIVAAAAPNHKAAL 94 Query: 188 PEGAQPVGDLKLSVSD 235 GA P KL V D Sbjct: 95 ISGAPPGPSQKLPVED 110
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 6/69 (8%) Frame = -2 Query: 412 APDDDAVVGERDEPSRERRKHPERA------GQRQQERLDEAGSRHARGREEEALLNVVA 251 A ++ + E++E +++R++ ER Q+++ER +E R + +EEAL ++ Sbjct: 82 AQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKKEKEEALQKMLD 141 Query: 250 REHGHVGDG 224 + + +G Sbjct: 142 QAENELENG 150
>JMT_ARATH (Q9AR07) Jasmonate O-methyltransferase (EC 2.1.1.141)| (S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase) Length = 389 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Frame = +2 Query: 128 LVCASAPTPTIAVVSK----HLVLPEGAQPVGDLKLSVSDMPMLSCHYI 262 L C+S P +++ + H + P+ +PV +L++S++D+P +YI Sbjct: 58 LGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYI 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,813,553 Number of Sequences: 219361 Number of extensions: 995214 Number of successful extensions: 4662 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 4239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4618 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)