ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet07b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
2gb|AY105110.1| Zea mays PCO079612 mRNA sequence 176 4e-41
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 123 5e-25
5emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 123 5e-25
6ref|NM_111655.3| Arabidopsis thaliana unknown protein AT3G07760 ... 100 8e-18
7ref|NM_180207.1| Arabidopsis thaliana unknown protein AT3G07760 ... 100 8e-18
8gb|BT014708.1| Arabidopsis thaliana At3g07760.2 mRNA sequence 100 8e-18
9gb|AY064693.1| Arabidopsis thaliana unknown protein mRNA, comple... 100 8e-18
10gb|AF428412.1|AF428412 Arabidopsis thaliana At3g07760/F17A17.10 ... 100 8e-18
11gb|AY054591.1| Arabidopsis thaliana Unknown protein mRNA, comple... 100 8e-18
12emb|BX824593.1|CNS0A5KM Arabidopsis thaliana Full-length cDNA Co... 100 8e-18
13emb|BX823377.1|CNS0A5GP Arabidopsis thaliana Full-length cDNA Co... 100 8e-18
14gb|AY088501.1| Arabidopsis thaliana clone 7246 mRNA, complete se... 100 8e-18
15emb|BX825228.1|CNS0A58A Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
16gb|AY023480.1| Oryza sativa microsatellite MRG5805 containing (T... 74 4e-10
17gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 ... 72 2e-09
18gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC... 72 2e-09
19gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 52 0.002
20emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20... 52 0.002
21gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, co... 44 0.40
22gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, comple... 44 0.40
23gb|AC011979.7| Homo sapiens chromosome 11, clone RP11-16F15, com... 44 0.40
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
25gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome... 44 0.40
26dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
27gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, co... 44 0.40
28dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.40
29dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.40
30gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, comp... 42 1.6
31gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, com... 42 1.6
32gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, comp... 42 1.6
33emb|BX294141.1| Pirellula sp. strain 1 complete genome; segment ... 42 1.6
34gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, comp... 42 1.6
35gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome... 40 6.2
36gb|AC002310.1|HUAC002310 Human Chromosome 16 BAC clone CIT987SK-... 40 6.2
37gb|AC159619.2| Mus musculus BAC clone RP24-392J3 from chromosome... 40 6.2
38ref|NM_002209.1| Homo sapiens integrin, alpha L (antigen CD11A (... 40 6.2
39gb|DQ131904.1| Homo sapiens integrin, alpha L (antigen CD11A (p1... 40 6.2
40gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, co... 40 6.2
41emb|Z94045.1|CSBGLZ C.stercorarium bglZ gene 40 6.2
42gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete se... 40 6.2
43gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cance... 40 6.2
44gb|AC107223.5| Homo sapiens BAC clone RP11-1289C17 from 4, compl... 40 6.2
45ref|NM_214600.1| Strongylocentrotus purpuratus seawi (LOC373434)... 40 6.2
46gb|S72472.1| isoflavone reductase [Pisum sativum=peas, seedlings... 40 6.2
47gb|AY014901.1| Strongylocentrotus purpuratus clone C12/2 seawi m... 40 6.2
48gb|AY014900.1| Strongylocentrotus purpuratus clone 6-2 seawi mRN... 40 6.2
49gb|AY014899.1| Strongylocentrotus purpuratus seawi mRNA, complet... 40 6.2
50gb|AC093249.4| Homo sapiens chromosome 16 clone RP11-146F11, com... 40 6.2
51gb|AF277052.1|AF277052 Medicago truncatula isoflavone reductase ... 40 6.2
52emb|X58078.1|MSISREDMR M.sativa mRNA for isoflavone reductase 40 6.2
53emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7... 40 6.2
54gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, comple... 40 6.2
55gb|U17436.1|MSU17436 Medicago sativa isoflavone reductase (IFR) ... 40 6.2
56gb|AC123620.14| Mus musculus chromosome 12, clone RP23-53J21, co... 40 6.2
57gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, comple... 40 6.2
58gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, compl... 40 6.2
59emb|AL845531.3| Mouse DNA sequence from clone RP23-232I4 on chro... 40 6.2
60emb|AL670959.8| Mouse DNA sequence from clone RP23-94L5 on chrom... 40 6.2
61gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosom... 40 6.2
62emb|Y00796.1|HSFLA1A Human mRNA for leukocyte-associated molecul... 40 6.2

>dbj|AK073732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I15, full
           insert sequence
          Length = 925

 Score =  186 bits (94), Expect = 4e-44
 Identities = 157/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 281 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 340
           |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 235 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 294

                                                                       
Query: 341 gacgtcggcttgtggcttgaagagataaatcttggtggctacagacaagtttttgaagaa 400
           || || || || ||||||||||||||||| |||||  ||||||| ||||||||||| |||
Sbjct: 295 gatgttgggttatggcttgaagagataaaccttggcagctacaggcaagtttttgaggaa 354

                                                                     
Query: 401 aacagtgtcaatggagagtatctagagagcttgtcgatgtttactaccgagcagattc 458
           ||| ||||||||||||||||||| || ||| |||||||||||||||| || |||||||
Sbjct: 355 aacggtgtcaatggagagtatcttgaaagcctgtcgatgtttactacagaacagattc 412



to top

>gb|AY105110.1| Zea mays PCO079612 mRNA sequence
          Length = 1023

 Score =  176 bits (89), Expect = 4e-41
 Identities = 158/181 (87%)
 Strand = Plus / Plus

                                                                       
Query: 278 aggagggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtc 337
           |||| ||||||| |||| ||| |||| ||||| ||||| |||||||||||||||||||||
Sbjct: 318 aggaaggagatgggccgtgggcggtcgccggaaccgctcgatttcttcatatggactgtc 377

                                                                       
Query: 338 gaggacgtcggcttgtggcttgaagagataaatcttggtggctacagacaagtttttgaa 397
           ||||| || || || ||||| ||||| || || |||||||||||||||||||| ||||||
Sbjct: 378 gaggatgttggattatggctggaagaaattaaccttggtggctacagacaagtatttgaa 437

                                                                       
Query: 398 gaaaacagtgtcaatggagagtatctagagagcttgtcgatgtttactaccgagcagatt 457
           |||||  ||||||| ||||| |||||||| |||||||| ||||||||||| |||||||||
Sbjct: 438 gaaaatggtgtcaacggagaatatctagaaagcttgtccatgtttactactgagcagatt 497

            
Query: 458 c 458
           |
Sbjct: 498 c 498



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                            
Query: 353      tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 412
                ||||||||||||||||| |||||  ||||||| ||||||||||| |||||| ||||||||
Sbjct: 19970946 tggcttgaagagataaaccttggcagctacaggcaagtttttgaggaaaacggtgtcaat 19970887

                                                              
Query: 413      ggagagtatctagagagcttgtcgatgtttactaccgagcagattc 458
                ||||||||||| || ||| |||||||||||||||| || |||||||
Sbjct: 19970886 ggagagtatcttgaaagcctgtcgatgtttactacagaacagattc 19970841



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                            
Query: 281      agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 340
                |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 19973280 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 19973221

                 
Query: 341      g 341
                |
Sbjct: 19973220 g 19973220



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Minus

                                                                            
Query: 353      tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 412
                ||||||||||||||||| |||||  ||||||| ||||||||||| |||||| ||||||||
Sbjct: 19897160 tggcttgaagagataaaccttggcagctacaggcaagtttttgaggaaaacggtgtcaat 19897101

                                                              
Query: 413      ggagagtatctagagagcttgtcgatgtttactaccgagcagattc 458
                ||||||||||| || ||| |||||||||||||||| || |||||||
Sbjct: 19897100 ggagagtatcttgaaagcctgtcgatgtttactacagaacagattc 19897055



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                            
Query: 281      agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 340
                |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 19899494 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 19899435

                 
Query: 341      g 341
                |
Sbjct: 19899434 g 19899434



to top

>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165433

 Score =  123 bits (62), Expect = 5e-25
 Identities = 95/106 (89%)
 Strand = Plus / Plus

                                                                         
Query: 353   tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 412
             ||||||||||||||||| |||||  ||||||| ||||||||||| |||||| ||||||||
Sbjct: 56314 tggcttgaagagataaaccttggcagctacaggcaagtttttgaggaaaacggtgtcaat 56373

                                                           
Query: 413   ggagagtatctagagagcttgtcgatgtttactaccgagcagattc 458
             ||||||||||| || ||| |||||||||||||||| || |||||||
Sbjct: 56374 ggagagtatcttgaaagcctgtcgatgtttactacagaacagattc 56419



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                         
Query: 281   agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 340
             |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 53980 agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 54039

              
Query: 341   g 341
             |
Sbjct: 54040 g 54040



to top

>ref|NM_111655.3| Arabidopsis thaliana unknown protein AT3G07760 transcript variant
           AT3G07760.1 mRNA, complete cds
          Length = 780

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 153 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 212

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 213 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 272

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 273 tagaaagcatgtctgtgtttactaccgagcagat 306



to top

>ref|NM_180207.1| Arabidopsis thaliana unknown protein AT3G07760 transcript variant
           AT3G07760.2 mRNA, complete cds
          Length = 766

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 154 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 213

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 214 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 273

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 274 tagaaagcatgtctgtgtttactaccgagcagat 307



to top

>gb|BT014708.1| Arabidopsis thaliana At3g07760.2 mRNA sequence
          Length = 375

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 14  ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 73

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 74  agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 133

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 134 tagaaagcatgtctgtgtttactaccgagcagat 167



to top

>gb|AY064693.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 400

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 17  ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 76

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 77  agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 136

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 137 tagaaagcatgtctgtgtttactaccgagcagat 170



to top

>gb|AF428412.1|AF428412 Arabidopsis thaliana At3g07760/F17A17.10 mRNA, complete cds
          Length = 814

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 197 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 256

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 257 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 316

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 317 tagaaagcatgtctgtgtttactaccgagcagat 350



to top

>gb|AY054591.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 753

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 154 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 213

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 214 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 273

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 274 tagaaagcatgtctgtgtttactaccgagcagat 307



to top

>emb|BX824593.1|CNS0A5KM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH59ZB08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 690

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 81  ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 140

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 141 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 200

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 201 tagaaagcatgtctgtgtttactaccgagcagat 234



to top

>emb|BX823377.1|CNS0A5GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZG01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 744

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 75  ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 134

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 135 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 194

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 195 tagaaagcatgtctgtgtttactaccgagcagat 228



to top

>gb|AY088501.1| Arabidopsis thaliana clone 7246 mRNA, complete sequence
          Length = 779

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 128/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| |||||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 153 ctcccgagcctcttgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 212

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||||||| ||||
Sbjct: 213 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaatggagaatatc 272

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| ||||  |||||||||||||||||||
Sbjct: 273 tagaaagcatgtctgtgtttactaccgagcagat 306



to top

>emb|BX825228.1|CNS0A58A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL21ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 637

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 125/154 (81%)
 Strand = Plus / Plus

                                                                       
Query: 303 ctccggagccgcttgatttcttcatatggactgtcgaggacgtcggcttgtggcttgaag 362
           |||| ||||| || ||||||||||| |||||||| ||||| || || |  ||||| || |
Sbjct: 123 ctcccgagcctctcgatttcttcatctggactgttgaggatgttgggtcttggctcgagg 182

                                                                       
Query: 363 agataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaatggagagtatc 422
           ||||||| ||||| |||||| | ||  ||||  |||||||  |||| |||||||| ||||
Sbjct: 183 agataaaccttgggggctaccgccagattttcaaagaaaatggtgtgaatggagaatatc 242

                                             
Query: 423 tagagagcttgtcgatgtttactaccgagcagat 456
           |||| ||| | ||  |||||||||||||||||||
Sbjct: 243 tagaaagcatttctgtgtttactaccgagcagat 276



to top

>gb|AY023480.1| Oryza sativa microsatellite MRG5805 containing (TCT)X8, genomic
           sequence
          Length = 224

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                       
Query: 281 agggagatgagccgcgggaggtctccggagccgcttgatttcttcatatggactgtcgag 340
           |||||||||||||| ||| |||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 14  agggagatgagccgggggcggtcgccggagccgctggatttcttcatctggacagtcgag 73

            
Query: 341 g 341
           |
Sbjct: 74  g 74



to top

>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete
             sequence
          Length = 79296

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 412
             ||||| || |||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||
Sbjct: 63549 tggctcgaggagataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaat 63608

                                                         
Query: 413   ggagagtatctagagagcttgtcgatgtttactaccgagcagat 456
             ||||| |||||||| ||| ||||  |||||||||||||||||||
Sbjct: 63609 ggagaatatctagaaagcatgtctgtgtttactaccgagcagat 63652



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 303   ctccggagccgcttgatttcttcatatggactgtcgagg 341
             |||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 62735 ctcccgagcctcttgatttcttcatctggactgttgagg 62773



to top

>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
             complete sequence
          Length = 121054

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   tggcttgaagagataaatcttggtggctacagacaagtttttgaagaaaacagtgtcaat 412
             ||||| || |||||||| ||||| |||||| | ||  ||||  |||||||  ||||||||
Sbjct: 28583 tggctcgaggagataaaccttgggggctaccgccagattttcaaagaaaatggtgtcaat 28642

                                                         
Query: 413   ggagagtatctagagagcttgtcgatgtttactaccgagcagat 456
             ||||| |||||||| ||| ||||  |||||||||||||||||||
Sbjct: 28643 ggagaatatctagaaagcatgtctgtgtttactaccgagcagat 28686



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 303   ctccggagccgcttgatttcttcatatggactgtcgagg 341
             |||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 27769 ctcccgagcctcttgatttcttcatctggactgttgagg 27807



to top

>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 206   cgtcgcgtccctgccatctccaccccgtccgcgatctcgggc 247
             |||| |||||||||  ||||||||||||| ||||||||||||
Sbjct: 38405 cgtcccgtccctgctgtctccaccccgtcagcgatctcgggc 38446



to top

>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE
          Length = 127003

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 308   gagccgcttgatttcttcatatggactgtcgagg 341
             |||||||||||||||||||| |||||||| ||||
Sbjct: 21907 gagccgcttgatttcttcatctggactgttgagg 21940



to top

>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence
          Length = 221083

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 139 cctcacccacccaacccctccc 160
           ||||||||||||||||||||||
Sbjct: 473 cctcacccacccaacccctccc 494



to top

>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence
          Length = 171427

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   cctcacccacccaacccctccc 160
             ||||||||||||||||||||||
Sbjct: 99148 cctcacccacccaacccctccc 99127



to top

>gb|AC011979.7| Homo sapiens chromosome 11, clone RP11-16F15, complete sequence
          Length = 154995

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 40    tgctctgccctgcccaagctccaatcctct 69
             ||||||||||||||||| |||||| |||||
Sbjct: 72771 tgctctgccctgcccaaactccaaccctct 72800



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 277      gaggagggagatgagccgcggg 298
                ||||||||||||||||||||||
Sbjct: 29824039 gaggagggagatgagccgcggg 29824060



to top

>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete sequence
          Length = 199295

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   cccacccaacccctcccctctc 165
             ||||||||||||||||||||||
Sbjct: 99429 cccacccaacccctcccctctc 99450



to top

>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2056_H01
          Length = 123428

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 277   gaggagggagatgagccgcggg 298
             ||||||||||||||||||||||
Sbjct: 80384 gaggagggagatgagccgcggg 80405



to top

>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence
          Length = 215363

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 144  cccacccaacccctcccctctc 165
            ||||||||||||||||||||||
Sbjct: 6439 cccacccaacccctcccctctc 6418



to top

>dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932b,
             complete sequence
          Length = 74001

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 308   gagccgcttgatttcttcatatggactgtcgagg 341
             ||||| |||||||||||||| |||||||| ||||
Sbjct: 64868 gagcctcttgatttcttcatctggactgttgagg 64901



to top

>dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572a,
             complete sequence
          Length = 48924

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 308   gagccgcttgatttcttcatatggactgtcgagg 341
             ||||| |||||||||||||| |||||||| ||||
Sbjct: 18739 gagcctcttgatttcttcatctggactgttgagg 18772



to top

>gb|AC163217.9| Mus musculus chromosome 1, clone RP23-474A1, complete sequence
          Length = 184175

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 365   ataaatcttggtggctacaga 385
             |||||||||||||||||||||
Sbjct: 59206 ataaatcttggtggctacaga 59186



to top

>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence
          Length = 170409

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 365    ataaatcttggtggctacaga 385
              |||||||||||||||||||||
Sbjct: 107935 ataaatcttggtggctacaga 107955



to top

>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence
          Length = 186799

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 365   ataaatcttggtggctacaga 385
             |||||||||||||||||||||
Sbjct: 45025 ataaatcttggtggctacaga 45045



to top

>emb|BX294141.1| Pirellula sp. strain 1 complete genome; segment 9/24
          Length = 299350

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 232   gtccgcgatctcgggcaccgt 252
             |||||||||||||||||||||
Sbjct: 95470 gtccgcgatctcgggcaccgt 95450



to top

>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence
          Length = 130466

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 365    ataaatcttggtggctacaga 385
              |||||||||||||||||||||
Sbjct: 106348 ataaatcttggtggctacaga 106368



to top

>gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome 9, complete sequence
          Length = 204750

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ctctcatgctctgccctgcc 53
              ||||||||||||||||||||
Sbjct: 170149 ctctcatgctctgccctgcc 170168



to top

>gb|AC002310.1|HUAC002310 Human Chromosome 16 BAC clone CIT987SK-A-635H12, complete sequence
          Length = 120955

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 35    tctcatgctctgccctgcccaagctcca 62
             ||||| |||||||||||||| |||||||
Sbjct: 64736 tctcaggctctgccctgccctagctcca 64709



to top

>gb|AC159619.2| Mus musculus BAC clone RP24-392J3 from chromosome 12, complete sequence
          Length = 171965

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   acaagtttttgaagaaaaca 404
             ||||||||||||||||||||
Sbjct: 26559 acaagtttttgaagaaaaca 26540



to top

>ref|NM_002209.1| Homo sapiens integrin, alpha L (antigen CD11A (p180), lymphocyte
            function-associated antigen 1; alpha polypeptide)
            (ITGAL), mRNA
          Length = 5133

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 35   tctcatgctctgccctgcccaagctcca 62
            ||||| |||||||||||||| |||||||
Sbjct: 4948 tctcaggctctgccctgccctagctcca 4975



to top

>gb|DQ131904.1| Homo sapiens integrin, alpha L (antigen CD11A (p180), lymphocyte
             function-associated antigen 1; alpha polypeptide) (ITGAL)
             gene, complete cds
          Length = 53535

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 35    tctcatgctctgccctgcccaagctcca 62
             ||||| |||||||||||||| |||||||
Sbjct: 51390 tctcaggctctgccctgccctagctcca 51417



to top

>gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, complete sequence
          Length = 183977

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tcccttcctctttccccaac 29
             ||||||||||||||||||||
Sbjct: 26918 tcccttcctctttccccaac 26937



to top

>emb|Z94045.1|CSBGLZ C.stercorarium bglZ gene
          Length = 2620

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  ttgatttcttcatatggact 334
            ||||||||||||||||||||
Sbjct: 1289 ttgatttcttcatatggact 1270



to top

>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence
          Length = 120323

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    agacaagtttttgaagaaaa 402
              ||||||||||||||||||||
Sbjct: 116441 agacaagtttttgaagaaaa 116422



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    agacaagtttttgaagaaaa 402
              ||||||||||||||||||||
Sbjct: 103561 agacaagtttttgaagaaaa 103542



to top

>gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 173237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ctgccatctccaccccgtcc 235
              ||||||||||||||||||||
Sbjct: 141117 ctgccatctccaccccgtcc 141098



to top

>gb|AC107223.5| Homo sapiens BAC clone RP11-1289C17 from 4, complete sequence
          Length = 183515

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ctcatgctctgccctgccca 55
              ||||||||||||||||||||
Sbjct: 166797 ctcatgctctgccctgccca 166816



to top

>ref|NM_214600.1| Strongylocentrotus purpuratus seawi (LOC373434), mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  aatcttggtggctacagaca 387
            ||||||||||||||||||||
Sbjct: 1968 aatcttggtggctacagaca 1949



to top

>gb|S72472.1| isoflavone reductase [Pisum sativum=peas, seedlings, Alaska Green,
           mRNA Partial, 957 nt]
          Length = 957

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 agacaagtttttgaagaaaa 402
           ||||||||||||||||||||
Sbjct: 412 agacaagtttttgaagaaaa 431



to top

>gb|AY014901.1| Strongylocentrotus purpuratus clone C12/2 seawi mRNA, complete cds
          Length = 1723

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 aatcttggtggctacagaca 387
           ||||||||||||||||||||
Sbjct: 634 aatcttggtggctacagaca 615



to top

>gb|AY014900.1| Strongylocentrotus purpuratus clone 6-2 seawi mRNA, partial cds
          Length = 2605

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  aatcttggtggctacagaca 387
            ||||||||||||||||||||
Sbjct: 1968 aatcttggtggctacagaca 1949



to top

>gb|AY014899.1| Strongylocentrotus purpuratus seawi mRNA, complete cds
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  aatcttggtggctacagaca 387
            ||||||||||||||||||||
Sbjct: 1968 aatcttggtggctacagaca 1949



to top

>gb|AC093249.4| Homo sapiens chromosome 16 clone RP11-146F11, complete sequence
          Length = 185664

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 35     tctcatgctctgccctgcccaagctcca 62
              ||||| |||||||||||||| |||||||
Sbjct: 184109 tctcaggctctgccctgccctagctcca 184082



to top

>gb|AF277052.1|AF277052 Medicago truncatula isoflavone reductase mRNA, complete cds
          Length = 1223

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 agacaagtttttgaagaaaa 402
           ||||||||||||||||||||
Sbjct: 484 agacaagtttttgaagaaaa 503



to top

>emb|X58078.1|MSISREDMR M.sativa mRNA for isoflavone reductase
          Length = 1181

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 agacaagtttttgaagaaaa 402
           ||||||||||||||||||||
Sbjct: 463 agacaagtttttgaagaaaa 482



to top

>emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7, COMPLETE SEQUENCE
          Length = 115553

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 383 agacaagtttttgaagaaaa 402
           ||||||||||||||||||||
Sbjct: 693 agacaagtttttgaagaaaa 674



to top

>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence
          Length = 197913

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tcccttcctctttccccaac 29
              ||||||||||||||||||||
Sbjct: 154380 tcccttcctctttccccaac 154399



to top

>gb|U17436.1|MSU17436 Medicago sativa isoflavone reductase (IFR) gene, complete cds
          Length = 2730

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  agacaagtttttgaagaaaa 402
            ||||||||||||||||||||
Sbjct: 1491 agacaagtttttgaagaaaa 1510



to top

>gb|AC123620.14| Mus musculus chromosome 12, clone RP23-53J21, complete sequence
          Length = 182783

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   acaagtttttgaagaaaaca 404
             ||||||||||||||||||||
Sbjct: 15226 acaagtttttgaagaaaaca 15245



to top

>gb|AC131187.4| Mus musculus BAC clone RP24-250M7 from 13, complete sequence
          Length = 159288

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   acaaccaccaccgtgttcta 99
            ||||||||||||||||||||
Sbjct: 1998 acaaccaccaccgtgttcta 2017



to top

>gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, complete sequence
          Length = 206677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    acaaccaccaccgtgttcta 99
             ||||||||||||||||||||
Sbjct: 49148 acaaccaccaccgtgttcta 49129



to top

>emb|AL845531.3| Mouse DNA sequence from clone RP23-232I4 on chromosome 2, complete
            sequence
          Length = 120366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  tttttgaagaaaacagtgtc 409
            ||||||||||||||||||||
Sbjct: 7192 tttttgaagaaaacagtgtc 7173



to top

>emb|AL670959.8| Mouse DNA sequence from clone RP23-94L5 on chromosome 4, complete
              sequence
          Length = 262388

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    tcacccacccaacccctccc 160
              ||||||||||||||||||||
Sbjct: 180154 tcacccacccaacccctccc 180173



to top

>gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosome 9, complete sequence
          Length = 198367

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ctctcatgctctgccctgcc 53
             ||||||||||||||||||||
Sbjct: 12682 ctctcatgctctgccctgcc 12701



to top

>emb|Y00796.1|HSFLA1A Human mRNA for leukocyte-associated molecule-1 alpha subunit (LFA-1
            alpha subunit)
          Length = 5133

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 35   tctcatgctctgccctgcccaagctcca 62
            ||||| |||||||||||||| |||||||
Sbjct: 4948 tctcaggctctgccctgccctagctcca 4975


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,808,079
Number of Sequences: 3902068
Number of extensions: 3808079
Number of successful extensions: 83698
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83484
Number of HSP's gapped (non-prelim): 214
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top