| Clone Name | baet06f05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || ||| |||||||||||||||||| ||||| | || Sbjct: 7094877 aacgacctggacccgaccacgccggacgccttcgacaagaactacttcgccaacatcgag 7094818 Query: 260 gtgaaccgtggcttcctccagtccgaccagga 291 |||||||| ||||||||||||||||||||||| Sbjct: 7094817 gtgaaccgcggcttcctccagtccgaccagga 7094786
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || ||| |||||||||||||||||| ||||| | || Sbjct: 7092772 aacgacctggacccgaccacgccggacgccttcgacaagaactacttcgccaacatcgag 7092713 Query: 260 gtgaaccgtggcttcctccagtccgaccagga 291 |||||||| ||||||||||||||||||||||| Sbjct: 7092712 gtgaaccgcggcttcctccagtccgaccagga 7092681
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || ||| |||||||||||||||||| ||||| | || Sbjct: 99461 aacgacctggacccgaccacgccggacgccttcgacaagaactacttcgccaacatcgag 99520 Query: 260 gtgaaccgtggcttcctccagtccgaccagga 291 |||||||| ||||||||||||||||||||||| Sbjct: 99521 gtgaaccgcggcttcctccagtccgaccagga 99552
>dbj|AK104936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G10, full insert sequence Length = 1202 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || ||| |||||||||||||||||| ||||| | || Sbjct: 847 aacgacctggacccgaccacgccggacgccttcgacaagaactacttcgccaacatcgag 906 Query: 260 gtgaaccgtggcttcctccagtccgaccagga 291 |||||||| ||||||||||||||||||||||| Sbjct: 907 gtgaaccgcggcttcctccagtccgaccagga 938 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacactttcggccgcgtgcaatgccagtttgtc 85 |||||||| ||||| |||||||| || ||||| ||||| | ||||| |||||||| || Sbjct: 670 accgaccttgtcgccctctcaggggcgcacacgttcgggagggtgcagtgccagttcgtg 729 Query: 86 accgacagattgtacaacttca 107 || ||||| |||||||||||| Sbjct: 730 acggacaggctgtacaacttca 751
>dbj|AK068353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013142D12, full insert sequence Length = 1201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || ||| |||||||||||||||||| ||||| | || Sbjct: 848 aacgacctggacccgaccacgccggacgccttcgacaagaactacttcgccaacatcgag 907 Query: 260 gtgaaccgtggcttcctccagtccgaccagga 291 |||||||| ||||||||||||||||||||||| Sbjct: 908 gtgaaccgcggcttcctccagtccgaccagga 939 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacactttcggccgcgtgcaatgccagtttgtc 85 |||||||||||||| |||||||| || ||||| ||||| | ||||| |||||||| || Sbjct: 671 accgacctcgtcgccctctcaggggcgcacacgttcgggagggtgcagtgccagttcgtg 730 Query: 86 accgacagattgtacaacttca 107 || ||||| |||||||||||| Sbjct: 731 acggacaggctgtacaacttca 752
>tpe|BN000568.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx39 gene for class III peroxidase 39 precursor, exons 1-4 Length = 2005 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || ||| |||||||||||||||||| ||||| | || Sbjct: 1739 aacgacctggacccgaccacgccggacgccttcgacaagaactacttcgccaacatcgag 1798 Query: 260 gtgaaccgtggcttcctccagtccgaccagga 291 |||||||| ||||||||||||||||||||||| Sbjct: 1799 gtgaaccgcggcttcctccagtccgaccagga 1830
>gb|AY110228.1| Zea mays CL32412_1 mRNA sequence Length = 1199 Score = 79.8 bits (40), Expect = 7e-12 Identities = 150/187 (80%) Strand = Plus / Minus Query: 258 aggtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgg 317 |||||||||| ||| ||||| | ||||||||||| |||||||| || || ||| || Sbjct: 425 aggtgaaccgaggcatcctcaactccgaccaggagctcaagtcgtcgcccctagcgcagg 366 Query: 318 ggacaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttcaaggcct 377 | || |||||||| |||||||||| |||||||| |||||| |||| ||||||| | || Sbjct: 365 gcaccacggcgcccatcgtcgaccagttcgcggccagccaagacgacttcttcgcgagct 306 Query: 378 tcgcanattccatgatcaagatggggaacataagggtgataacggacccctccaagggag 437 |||| | ||||||||||| ||||||||||| | | | | |||||||| |||| |||| Sbjct: 305 tcgcgcagtccatgatcaacatggggaacatcaagccgctcacggacccgtccagaggag 246 Query: 438 aagtccg 444 ||||||| Sbjct: 245 aagtccg 239
>ref|NM_194553.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0015O22.19), mRNA Length = 1011 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 742 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 801 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 802 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 861 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 862 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 912 Score = 48.1 bits (24), Expect = 0.026 Identities = 66/80 (82%) Strand = Plus / Plus Query: 28 cgacctcgtcgctctctcaggcgcacacactttcggccgcgtgcaatgccagtttgtcac 87 |||||||||||| |||||||| | ||||| ||||| | ||||| |||||||| || || Sbjct: 570 cgacctcgtcgccctctcaggtgggcacacgttcgggagggtgcagtgccagttcgtgac 629 Query: 88 cgacagattgtacaacttca 107 ||||| |||||||||||| Sbjct: 630 ggacaggctgtacaacttca 649
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 635279 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 635220 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 635219 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 635160 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 635159 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 635109 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 461778 atgatcaagatggggaacat 461759
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 102887 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 102828 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 102827 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 102768 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 102767 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 102717
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 635279 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 635220 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 635219 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 635160 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 635159 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 635109 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 461778 atgatcaagatggggaacat 461759
>dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C06, full insert sequence Length = 1447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 801 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 860 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 861 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 920 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 921 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 971 Score = 48.1 bits (24), Expect = 0.026 Identities = 66/80 (82%) Strand = Plus / Plus Query: 28 cgacctcgtcgctctctcaggcgcacacactttcggccgcgtgcaatgccagtttgtcac 87 |||||||||||| |||||||| | ||||| ||||| | ||||| |||||||| || || Sbjct: 629 cgacctcgtcgccctctcaggtgggcacacgttcgggagggtgcagtgccagttcgtgac 688 Query: 88 cgacagattgtacaacttca 107 ||||| |||||||||||| Sbjct: 689 ggacaggctgtacaacttca 708
>dbj|AK104633.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C08, full insert sequence Length = 1382 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 736 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 795 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 796 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 855 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 856 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 906 Score = 48.1 bits (24), Expect = 0.026 Identities = 66/80 (82%) Strand = Plus / Plus Query: 28 cgacctcgtcgctctctcaggcgcacacactttcggccgcgtgcaatgccagtttgtcac 87 |||||||||||| |||||||| | ||||| ||||| | ||||| |||||||| || || Sbjct: 564 cgacctcgtcgccctctcaggtgggcacacgttcgggagggtgcagtgccagttcgtgac 623 Query: 88 cgacagattgtacaacttca 107 ||||| |||||||||||| Sbjct: 624 ggacaggctgtacaacttca 643
>dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B11, full insert sequence Length = 1447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 801 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 860 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 861 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 920 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 921 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 971 Score = 48.1 bits (24), Expect = 0.026 Identities = 66/80 (82%) Strand = Plus / Plus Query: 28 cgacctcgtcgctctctcaggcgcacacactttcggccgcgtgcaatgccagtttgtcac 87 |||||||||||| |||||||| | ||||| ||||| | ||||| |||||||| || || Sbjct: 629 cgacctcgtcgccctctcaggtgggcacacgttcgggagggtgcagtgccagttcgtgac 688 Query: 88 cgacagattgtacaacttca 107 ||||| |||||||||||| Sbjct: 689 ggacaggctgtacaacttca 708
>tpe|BN000654.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx125 gene for class III peroxidase 125 precursor, exons 1-3 Length = 2806 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 2537 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 2596 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 2597 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 2656 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 2657 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 2707
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 200 aacgacctcgacccgacaacacccgacaagttcgacaagaactacttcaccaacctgaag 259 |||||||| |||||||| || || |||| |||||||| |||||| ||||||| | || Sbjct: 635276 aacgacctggacccgacgacgccggacaccttcgacaaccactactacaccaacatcgag 635217 Query: 260 gtgaaccgtggcttcctccagtccgaccaggaactcaagtctgacccactcgcggtgggg 319 || ||||| |||||||||||||| |||||||| |||||||| | || ||| ||| Sbjct: 635216 gtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccggg 635157 Query: 320 acaacggcgccaatcgtcgaccggttcgcgggcagccaggacgccttcttc 370 || |||||||| ||||||||||| ||||| |||||||| |||||||||| Sbjct: 635156 acgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttc 635106 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 461775 atgatcaagatggggaacat 461756
>gb|M32742.1|CUSCUPER C.sativus peroxidase (put.) (CuPer2) mRNA, 3'end Length = 1126 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 225 acaagttcgacaagaactacttcaccaacct 255 ||||||||||||||||||||| ||| ||||| Sbjct: 644 acaagttcgacaagaactactacacaaacct 674
>ref|NM_101321.2| Arabidopsis thaliana peroxidase AT1G14540 mRNA, complete cds Length = 1114 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 gacctcgtcgctctctcaggcgcacacac 57 |||||||||||||||||||| || ||||| Sbjct: 538 gacctcgtcgctctctcaggagctcacac 566
>ref|XM_522898.1| PREDICTED: Pan troglodytes similar to WD repeat domain 21 isoform 2 (LOC467501), mRNA Length = 1782 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaac 265 |||||||||||||| |||||||||| Sbjct: 756 ctacttcaccaaccggaaggtgaac 780
>gb|BT017640.1| Zea mays clone EL01N0438G07.c mRNA sequence Length = 768 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 ccaggacgccttcttcaaggccttc 379 ||||||||||||||||| ||||||| Sbjct: 401 ccaggacgccttcttcagggccttc 425
>gb|AY857761.1| Triticum monococcum peroxidase 7 (POX7) mRNA, complete cds Length = 1319 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 ccaggacgccttcttcaaggccttc 379 ||||||||||||||||| ||||||| Sbjct: 961 ccaggacgccttcttcagggccttc 985
>emb|AL590665.9| Human DNA sequence from clone RP11-229H11 on chromosome 13 Contains part of the gene for a novel TPR domain containing protein, complete sequence Length = 52758 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 169 atgcccaatgaacggcaacggtcagtccc 197 ||||| ||||||| ||||||||||||||| Sbjct: 32931 atgcctaatgaaccgcaacggtcagtccc 32959
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 gttcgacaagaactacttcaccaac 253 |||||||||||| |||||||||||| Sbjct: 4009020 gttcgacaagaagtacttcaccaac 4009044
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 29 gacctcgtcgctctctcaggcgcacacac 57 ||||||||||| ||||| ||||||||||| Sbjct: 7169096 gacctcgtcgcgctctccggcgcacacac 7169068
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 29 gacctcgtcgctctctcaggcgcacacac 57 ||||||||||| ||||| ||||||||||| Sbjct: 46507 gacctcgtcgcgctctccggcgcacacac 46479
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 29 gacctcgtcgctctctcaggcgcacacac 57 ||||||||||| ||||| ||||||||||| Sbjct: 4100 gacctcgtcgcgctctccggcgcacacac 4072
>gb|AY106563.1| Zea mays PCO123005 mRNA sequence Length = 628 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 ccaggacgccttcttcaaggccttc 379 ||||||||||||||||| ||||||| Sbjct: 407 ccaggacgccttcttcagggccttc 383
>tpe|BN000605.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx76 gene for class III peroxidase 76 precursor, exon 1 Length = 984 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 gacctcgtcgctctctcaggcgcacacac 57 ||||||||||| ||||| ||||||||||| Sbjct: 544 gacctcgtcgcgctctccggcgcacacac 572
>emb|AL929123.9| Mouse DNA sequence from clone RP23-328K3 on chromosome 4, complete sequence Length = 208830 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 agaactacttcaccaacctga 257 ||||||||||||||||||||| Sbjct: 19051 agaactacttcaccaacctga 19031
>gb|M37637.1|ARCPNC2 A.hypogaea cationic peroxidase mRNA, complete cds, clone prxPNC2 Length = 1330 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 acagattgtacaacttcaatggaac 114 ||||||||| ||||||||||||||| Sbjct: 816 acagattgttcaacttcaatggaac 840
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 cgccttcttcaaggccttcg 380 |||||||||||||||||||| Sbjct: 1099521 cgccttcttcaaggccttcg 1099502
>ref|NM_120756.2| Arabidopsis thaliana peroxidase AT5G06730 mRNA, complete cds Length = 1392 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 991 atgatcaagatggggaacat 1010
>ref|NM_188048.1| Oryza sativa (japonica cultivar-group), Ozsa8468 predicted mRNA Length = 975 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 553 accgacctcgtcgcgctctccggcgcgcacac 584
>ref|NM_194528.1| Oryza sativa (japonica cultivar-group) putative copia-type polyprotein (OSJNBa0065H03.10), mRNA Length = 4053 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 3967 atgatcaagatggggaacat 3986
>ref|XM_479513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1246 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gctctctcaggcgcacacac 57 |||||||||||||||||||| Sbjct: 565 gctctctcaggcgcacacac 584
>ref|XM_478980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cctgaaggtgaaccgtggct 272 |||||||||||||||||||| Sbjct: 437 cctgaaggtgaaccgtggct 456
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03, complete sequence Length = 141017 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 65952 atgatcaagatggggaacat 65933
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds Length = 1308 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 29 gacctcgtcgctctctcaggcgcacacactttcggc 64 ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 580 gacctcgtcgccctctccggcgcgcacaccttcggc 615
>gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 952 atgatcaagatggggaacat 971
>ref|NM_181340.1| Homo sapiens WD repeat domain 21A (WDR21A), transcript variant 2, mRNA Length = 2461 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 735 ctacttcaccaaccggaaggtgaa 758
>ref|NM_015604.2| Homo sapiens WD repeat domain 21A (WDR21A), transcript variant 1, mRNA Length = 2563 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 835 ctacttcaccaaccggaaggtgaa 858
>gb|AY519360.1| Arabidopsis thaliana peroxidase ATP29a gene, complete cds Length = 1414 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 1265 atgatcaagatggggaacat 1284
>ref|XM_547889.2| PREDICTED: Canis familiaris similar to WD repeat domain 21A isoform 1 (LOC490767), mRNA Length = 1593 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tacttcaccaacctgaaggtgaac 265 ||||||||||||| |||||||||| Sbjct: 766 tacttcaccaaccggaaggtgaac 789
>emb|Y11794.1|ATP29A A.thaliana mRNA for peroxidase ATP29a, partial Length = 753 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 295 atgatcaagatggggaacat 314
>gb|BT008584.1| Arabidopsis thaliana clone U51349 putative peroxidase (At5g06730) mRNA, complete cds Length = 1108 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 928 atgatcaagatggggaacat 947
>emb|AL080157.1|HSM800674 Homo sapiens mRNA; cDNA DKFZp434K114 (from clone DKFZp434K114) Length = 2915 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 651 ctacttcaccaaccggaaggtgaa 674
>dbj|AK027745.1| Homo sapiens cDNA FLJ14839 fis, clone OVARC1001791 Length = 2374 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 725 ctacttcaccaaccggaaggtgaa 748
>gb|AY032674.1| Nicotiana tabacum peroxidase (PER9-6) mRNA, complete cds Length = 1270 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 attccatgatcaagatgggg 403 |||||||||||||||||||| Sbjct: 931 attccatgatcaagatgggg 950
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cctgaaggtgaaccgtggct 272 |||||||||||||||||||| Sbjct: 24111082 cctgaaggtgaaccgtggct 24111101
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 9340532 accgacctcgtcgcgctctccggcgcgcacac 9340563
>emb|BX831603.1|CNS0A10N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH18ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 974 atgatcaagatggggaacat 993
>gb|BC035901.1| Homo sapiens WD repeat domain 21A, transcript variant 2, mRNA (cDNA clone MGC:46524 IMAGE:5241663), complete cds Length = 2360 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 634 ctacttcaccaaccggaaggtgaa 657
>gb|BC018979.2| Homo sapiens WD repeat domain 21A, transcript variant 1, mRNA (cDNA clone MGC:20547 IMAGE:3604168), complete cds Length = 2420 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 692 ctacttcaccaaccggaaggtgaa 715
>gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I, complete sequence Length = 83351 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gacctcgtcgctctctcagg 48 |||||||||||||||||||| Sbjct: 12202 gacctcgtcgctctctcagg 12183
>gb|AY088509.1| Arabidopsis thaliana clone 7360 mRNA, complete sequence Length = 1351 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 985 atgatcaagatggggaacat 1004
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 10859 accgacctcgtcgcgctctccggcgcgcacac 10890
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 117126 accgacctcgtcgcgctctccggcgcgcacac 117157
>dbj|D16442.1|RICPERX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gctctctcaggcgcacacac 57 |||||||||||||||||||| Sbjct: 624 gctctctcaggcgcacacac 643
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cctgaaggtgaaccgtggct 272 |||||||||||||||||||| Sbjct: 44497 cctgaaggtgaaccgtggct 44516
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gacctcgtcgctctctcagg 48 |||||||||||||||||||| Sbjct: 105809 gacctcgtcgctctctcagg 105790
>dbj|AP002032.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPH15 Length = 71277 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 30609 atgatcaagatggggaacat 30590
>dbj|AK118827.1| Arabidopsis thaliana At5g06730 mRNA for putative peroxidase, complete cds, clone: RAFL21-16-B10 Length = 1296 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 991 atgatcaagatggggaacat 1010
>dbj|AK103467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129P08, full insert sequence Length = 1384 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 704 accgacctcgtcgcgctctccggcgcgcacac 735
>dbj|AK101508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045A16, full insert sequence Length = 1601 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 932 accgacctcgtcgcgctctccggcgcgcacac 963
>dbj|AK073616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051E10, full insert sequence Length = 1245 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gctctctcaggcgcacacac 57 |||||||||||||||||||| Sbjct: 564 gctctctcaggcgcacacac 583
>dbj|AK063147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-H03, full insert sequence Length = 770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cctgaaggtgaaccgtggct 272 |||||||||||||||||||| Sbjct: 437 cctgaaggtgaaccgtggct 456
>dbj|AK060365.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H12, full insert sequence Length = 1391 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 706 accgacctcgtcgcgctctccggcgcgcacac 737
>gb|AY108658.1| Zea mays PCO073925 mRNA sequence Length = 1570 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||| | ||||||||||||||||| ||||| Sbjct: 825 accgacatggtcgctctctcaggcgctcacac 856
>tpe|BN000653.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx124 gene for class III peroxidase 124 precursor, exons 1-2 Length = 6789 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgatcaagatggggaacat 408 |||||||||||||||||||| Sbjct: 6703 atgatcaagatggggaacat 6722
>tpe|BN000533.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx4 gene for class III peroxidase 4 precursor, exons 1-2 Length = 1786 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 26 accgacctcgtcgctctctcaggcgcacacac 57 |||||||||||||| ||||| ||||| ||||| Sbjct: 1364 accgacctcgtcgcgctctccggcgcgcacac 1395
>emb|BX247962.1|CNSLT1I5S human full-length cDNA clone CS0DA010YD24 of Neuroblastoma of Homo sapiens (human) Length = 1587 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ctacttcaccaacctgaaggtgaa 264 |||||||||||||| ||||||||| Sbjct: 707 ctacttcaccaaccggaaggtgaa 730
>emb|AL929012.4| Mouse DNA sequence from clone RP23-477G20 on chromosome 2, complete sequence Length = 201304 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 agctatagggccttcctgtc 162 |||||||||||||||||||| Sbjct: 171856 agctatagggccttcctgtc 171837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,419,351 Number of Sequences: 3902068 Number of extensions: 2419351 Number of successful extensions: 46604 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46204 Number of HSP's gapped (non-prelim): 400 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)