| Clone Name | baet06f03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 337 bits (170), Expect = 2e-89 Identities = 341/398 (85%) Strand = Plus / Minus Query: 1 caagtagttctccgcagctggaaagattccctggaagcactcaagacatgtgatgtcctt 60 |||||||| ||||| ||||||||||||||||||||||| || ||||||||||| |||| Sbjct: 26013764 caagtagtcctccgaagctggaaagattccctggaagcgcttcggacatgtgatggcctt 26013705 Query: 61 ctccctcatgccgaagaccttcacattgcgaagaggtgcgtcgagtcgttggctgccaag 120 ||||||||||| |||||||||||||||| |||||| ||| |||| || ||||||| ||| Sbjct: 26013704 ctccctcatgctgaagaccttcacattgtgaagagatgcatcgaatcattggctggcaaa 26013645 Query: 121 gctagcatcgatccagacctctttggctggccagtatcagagcacggtgcgatgcatagc 180 |||||||||||||| |||||||| ||||||||||| || || || || | ||||| ||| Sbjct: 26013644 gctagcatcgatccggacctcttcggctggccagtctcggaacatagtaccatgcaaagc 26013585 Query: 181 cccgggggcagtgtgttgtggaatggtattagcacaggcgctaagctcgggaacttcagc 240 |||||||| ||||| ||||||||||| || ||||| || || ||| | |||||| ||| Sbjct: 26013584 cccgggggaagtgtcttgtggaatggcataagcacgggtgcgaaggttaggaactgcagt 26013525 Query: 241 tcagattggtggtatgatgatgcttcatcattgagcttccctacatacaagaggcttatc 300 || || |||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 26013524 tcggactggtggtatgatgatgcttcctccctgagcttccctacatacaagaggcttatt 26013465 Query: 301 tccactatggagtcaagaggcgccaaggaggagattgtcgccggttcgctcacatactat 360 || | ||||||||||||||| ||| ||||||| | || ||||||||||||||||| Sbjct: 26013464 tcttccatggagtcaagaggcatcaaacaggagatcattgcgggttcgctcacatactac 26013405 Query: 361 gccaagaagtgtctcccagggctgaataggcgtcaaag 398 |||||||||| |||||||||| |||||||||||||||| Sbjct: 26013404 gccaagaagtttctcccagggttgaataggcgtcaaag 26013367
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 337 bits (170), Expect = 2e-89 Identities = 341/398 (85%) Strand = Plus / Minus Query: 1 caagtagttctccgcagctggaaagattccctggaagcactcaagacatgtgatgtcctt 60 |||||||| ||||| ||||||||||||||||||||||| || ||||||||||| |||| Sbjct: 25941940 caagtagtcctccgaagctggaaagattccctggaagcgcttcggacatgtgatggcctt 25941881 Query: 61 ctccctcatgccgaagaccttcacattgcgaagaggtgcgtcgagtcgttggctgccaag 120 ||||||||||| |||||||||||||||| |||||| ||| |||| || ||||||| ||| Sbjct: 25941880 ctccctcatgctgaagaccttcacattgtgaagagatgcatcgaatcattggctggcaaa 25941821 Query: 121 gctagcatcgatccagacctctttggctggccagtatcagagcacggtgcgatgcatagc 180 |||||||||||||| |||||||| ||||||||||| || || || || | ||||| ||| Sbjct: 25941820 gctagcatcgatccggacctcttcggctggccagtctcggaacatagtaccatgcaaagc 25941761 Query: 181 cccgggggcagtgtgttgtggaatggtattagcacaggcgctaagctcgggaacttcagc 240 |||||||| ||||| ||||||||||| || ||||| || || ||| | |||||| ||| Sbjct: 25941760 cccgggggaagtgtcttgtggaatggcataagcacgggtgcgaaggttaggaactgcagt 25941701 Query: 241 tcagattggtggtatgatgatgcttcatcattgagcttccctacatacaagaggcttatc 300 || || |||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 25941700 tcggactggtggtatgatgatgcttcctccctgagcttccctacatacaagaggcttatt 25941641 Query: 301 tccactatggagtcaagaggcgccaaggaggagattgtcgccggttcgctcacatactat 360 || | ||||||||||||||| ||| ||||||| | || ||||||||||||||||| Sbjct: 25941640 tcttccatggagtcaagaggcatcaaacaggagatcattgcgggttcgctcacatactac 25941581 Query: 361 gccaagaagtgtctcccagggctgaataggcgtcaaag 398 |||||||||| |||||||||| |||||||||||||||| Sbjct: 25941580 gccaagaagtttctcccagggttgaataggcgtcaaag 25941543
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 337 bits (170), Expect = 2e-89 Identities = 341/398 (85%) Strand = Plus / Plus Query: 1 caagtagttctccgcagctggaaagattccctggaagcactcaagacatgtgatgtcctt 60 |||||||| ||||| ||||||||||||||||||||||| || ||||||||||| |||| Sbjct: 97907 caagtagtcctccgaagctggaaagattccctggaagcgcttcggacatgtgatggcctt 97966 Query: 61 ctccctcatgccgaagaccttcacattgcgaagaggtgcgtcgagtcgttggctgccaag 120 ||||||||||| |||||||||||||||| |||||| ||| |||| || ||||||| ||| Sbjct: 97967 ctccctcatgctgaagaccttcacattgtgaagagatgcatcgaatcattggctggcaaa 98026 Query: 121 gctagcatcgatccagacctctttggctggccagtatcagagcacggtgcgatgcatagc 180 |||||||||||||| |||||||| ||||||||||| || || || || | ||||| ||| Sbjct: 98027 gctagcatcgatccggacctcttcggctggccagtctcggaacatagtaccatgcaaagc 98086 Query: 181 cccgggggcagtgtgttgtggaatggtattagcacaggcgctaagctcgggaacttcagc 240 |||||||| ||||| ||||||||||| || ||||| || || ||| | |||||| ||| Sbjct: 98087 cccgggggaagtgtcttgtggaatggcataagcacgggtgcgaaggttaggaactgcagt 98146 Query: 241 tcagattggtggtatgatgatgcttcatcattgagcttccctacatacaagaggcttatc 300 || || |||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 98147 tcggactggtggtatgatgatgcttcctccctgagcttccctacatacaagaggcttatt 98206 Query: 301 tccactatggagtcaagaggcgccaaggaggagattgtcgccggttcgctcacatactat 360 || | ||||||||||||||| ||| ||||||| | || ||||||||||||||||| Sbjct: 98207 tcttccatggagtcaagaggcatcaaacaggagatcattgcgggttcgctcacatactac 98266 Query: 361 gccaagaagtgtctcccagggctgaataggcgtcaaag 398 |||||||||| |||||||||| |||||||||||||||| Sbjct: 98267 gccaagaagtttctcccagggttgaataggcgtcaaag 98304
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 85.7 bits (43), Expect = 1e-13 Identities = 208/263 (79%) Strand = Plus / Plus Query: 18 ctggaaagattccctggaagcactcaagacatgtgatgtccttctccctcatgccgaaga 77 |||||||||||| ||| ||||||| | |||||||| | || ||||||||||| ||| | Sbjct: 45275 ctggaaagattctctgaaagcactggaaacatgtgaagatctcctccctcatgctgaaaa 45334 Query: 78 ccttcacattgcgaagaggtgcgtcgagtcgttggctgccaaggctagcatcgatccaga 137 |||||| |||| |||||| ||| | ||||| || || | ||||||| | ||||||| | Sbjct: 45335 ccttcaaattgtgaagagatgcattgagtcattagcatcgaaggctactaccgatccaaa 45394 Query: 138 cctctttggctggccagtatcagagcacggtgcgatgcatagccccgggggcagtgtgtt 197 ||||||||| |||||| || || || || ||||| |||||||| |||||||| | Sbjct: 45395 cctctttggttggccaataagggaacatggcattatgcaaagccccggtggcagtgtact 45454 Query: 198 gtggaatggtattagcacaggcgctaagctcgggaacttcagctcagattggtggtatga 257 |||||| || || |||||||| || | || | | |||||||| ||| | ||||||||||| Sbjct: 45455 gtggaacgggatcagcacaggtgccaggcccagaaacttcagttcaaactggtggtatga 45514 Query: 258 tgatgcttcatcattgagcttcc 280 ||||||||| ||||||| |||| Sbjct: 45515 ggatgcttcagcattgagtttcc 45537 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Plus Query: 352 acatactatgccaagaagtgtctcccagggctgaataggcgtcaaagtatggga 405 ||||||||||| || |||| |||||| || || ||||||||||| || |||||| Sbjct: 45609 acatactatgctaaaaagtatctcccgggactaaataggcgtcatagcatggga 45662
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 85.7 bits (43), Expect = 1e-13 Identities = 208/263 (79%) Strand = Plus / Minus Query: 18 ctggaaagattccctggaagcactcaagacatgtgatgtccttctccctcatgccgaaga 77 |||||||||||| ||| ||||||| | |||||||| | || ||||||||||| ||| | Sbjct: 24590585 ctggaaagattctctgaaagcactggaaacatgtgaagatctcctccctcatgctgaaaa 24590526 Query: 78 ccttcacattgcgaagaggtgcgtcgagtcgttggctgccaaggctagcatcgatccaga 137 |||||| |||| |||||| ||| | ||||| || || | ||||||| | ||||||| | Sbjct: 24590525 ccttcaaattgtgaagagatgcattgagtcattagcatcgaaggctactaccgatccaaa 24590466 Query: 138 cctctttggctggccagtatcagagcacggtgcgatgcatagccccgggggcagtgtgtt 197 ||||||||| |||||| || || || || ||||| |||||||| |||||||| | Sbjct: 24590465 cctctttggttggccaataagggaacatggcattatgcaaagccccggtggcagtgtact 24590406 Query: 198 gtggaatggtattagcacaggcgctaagctcgggaacttcagctcagattggtggtatga 257 |||||| || || |||||||| || | || | | |||||||| ||| | ||||||||||| Sbjct: 24590405 gtggaacgggatcagcacaggtgccaggcccagaaacttcagttcaaactggtggtatga 24590346 Query: 258 tgatgcttcatcattgagcttcc 280 ||||||||| ||||||| |||| Sbjct: 24590345 ggatgcttcagcattgagtttcc 24590323 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Minus Query: 352 acatactatgccaagaagtgtctcccagggctgaataggcgtcaaagtatggga 405 ||||||||||| || |||| |||||| || || ||||||||||| || |||||| Sbjct: 24590251 acatactatgctaaaaagtatctcccgggactaaataggcgtcatagcatggga 24590198
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 85.7 bits (43), Expect = 1e-13 Identities = 208/263 (79%) Strand = Plus / Minus Query: 18 ctggaaagattccctggaagcactcaagacatgtgatgtccttctccctcatgccgaaga 77 |||||||||||| ||| ||||||| | |||||||| | || ||||||||||| ||| | Sbjct: 22630 ctggaaagattctctgaaagcactggaaacatgtgaagatctcctccctcatgctgaaaa 22571 Query: 78 ccttcacattgcgaagaggtgcgtcgagtcgttggctgccaaggctagcatcgatccaga 137 |||||| |||| |||||| ||| | ||||| || || | ||||||| | ||||||| | Sbjct: 22570 ccttcaaattgtgaagagatgcattgagtcattagcatcgaaggctactaccgatccaaa 22511 Query: 138 cctctttggctggccagtatcagagcacggtgcgatgcatagccccgggggcagtgtgtt 197 ||||||||| |||||| || || || || ||||| |||||||| |||||||| | Sbjct: 22510 cctctttggttggccaataagggaacatggcattatgcaaagccccggtggcagtgtact 22451 Query: 198 gtggaatggtattagcacaggcgctaagctcgggaacttcagctcagattggtggtatga 257 |||||| || || |||||||| || | || | | |||||||| ||| | ||||||||||| Sbjct: 22450 gtggaacgggatcagcacaggtgccaggcccagaaacttcagttcaaactggtggtatga 22391 Query: 258 tgatgcttcatcattgagcttcc 280 ||||||||| ||||||| |||| Sbjct: 22390 ggatgcttcagcattgagtttcc 22368 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Minus Query: 352 acatactatgccaagaagtgtctcccagggctgaataggcgtcaaagtatggga 405 ||||||||||| || |||| |||||| || || ||||||||||| || |||||| Sbjct: 22296 acatactatgctaaaaagtatctcccgggactaaataggcgtcatagcatggga 22243
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 85.7 bits (43), Expect = 1e-13 Identities = 208/263 (79%) Strand = Plus / Minus Query: 18 ctggaaagattccctggaagcactcaagacatgtgatgtccttctccctcatgccgaaga 77 |||||||||||| ||| ||||||| | |||||||| | || ||||||||||| ||| | Sbjct: 24508054 ctggaaagattctctgaaagcactggaaacatgtgaagatctcctccctcatgctgaaaa 24507995 Query: 78 ccttcacattgcgaagaggtgcgtcgagtcgttggctgccaaggctagcatcgatccaga 137 |||||| |||| |||||| ||| | ||||| || || | ||||||| | ||||||| | Sbjct: 24507994 ccttcaaattgtgaagagatgcattgagtcattagcatcgaaggctactaccgatccaaa 24507935 Query: 138 cctctttggctggccagtatcagagcacggtgcgatgcatagccccgggggcagtgtgtt 197 ||||||||| |||||| || || || || ||||| |||||||| |||||||| | Sbjct: 24507934 cctctttggttggccaataagggaacatggcattatgcaaagccccggtggcagtgtact 24507875 Query: 198 gtggaatggtattagcacaggcgctaagctcgggaacttcagctcagattggtggtatga 257 |||||| || || |||||||| || | || | | |||||||| ||| | ||||||||||| Sbjct: 24507874 gtggaacgggatcagcacaggtgccaggcccagaaacttcagttcaaactggtggtatga 24507815 Query: 258 tgatgcttcatcattgagcttcc 280 ||||||||| ||||||| |||| Sbjct: 24507814 ggatgcttcagcattgagtttcc 24507792 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Minus Query: 352 acatactatgccaagaagtgtctcccagggctgaataggcgtcaaagtatggga 405 ||||||||||| || |||| |||||| || || ||||||||||| || |||||| Sbjct: 24507720 acatactatgctaaaaagtatctcccgggactaaataggcgtcatagcatggga 24507667
>gb|AY111357.1| Zea mays CL11582_1 mRNA sequence Length = 554 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 241 tcagattggtggtatgatgatgcttcatcattgagcttccctacatacaagaggcttatc 300 ||||| |||||||||| |||||||||||||||||| || || | || |||||| | ||| Sbjct: 269 tcagactggtggtatggtgatgcttcatcattgagttttcccatgtataagaggttaatc 328 Query: 301 tccactatggagtc 314 ||||| |||||||| Sbjct: 329 tccaccatggagtc 342
>ref|XM_479933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3114 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 gattggtggtatgatgatgcttcat 268 ||||||||||||||||||| ||||| Sbjct: 1443 gattggtggtatgatgatgtttcat 1467
>gb|AC104411.5| Homo sapiens 3 BAC RP11-555M1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tggaaagattccctggaagca 39 ||||||||||||||||||||| Sbjct: 29176 tggaaagattccctggaagca 29196
>ref|NM_064640.2| Caenorhabditis elegans C38C6.3 (C38C6.3) mRNA, complete cds Length = 1001 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 tcagattggtggtatgatgat 261 ||||||||||||||||||||| Sbjct: 600 tcagattggtggtatgatgat 620
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 gattggtggtatgatgatgcttcat 268 ||||||||||||||||||| ||||| Sbjct: 1719572 gattggtggtatgatgatgtttcat 1719548 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcatgccgaagaccttcaca 85 |||||||||||||||||||| Sbjct: 11847258 tcatgccgaagaccttcaca 11847277
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 gattggtggtatgatgatgcttcat 268 ||||||||||||||||||| ||||| Sbjct: 1933 gattggtggtatgatgatgtttcat 1909
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 gattggtggtatgatgatgcttcat 268 ||||||||||||||||||| ||||| Sbjct: 119072 gattggtggtatgatgatgtttcat 119048
>dbj|AK100956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140F10, full insert sequence Length = 3115 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 gattggtggtatgatgatgcttcat 268 ||||||||||||||||||| ||||| Sbjct: 1444 gattggtggtatgatgatgtttcat 1468
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 acatactatgccaagaagtgtctc 375 |||||||||| ||||||||||||| Sbjct: 32922 acatactatgtcaagaagtgtctc 32899
>gb|AC068607.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-392C14, complete sequence Length = 218081 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cttcatcattgagcttccct 282 |||||||||||||||||||| Sbjct: 201143 cttcatcattgagcttccct 201162
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1, xilon1 retrotransposon, helitron B73_14578, gypsy retrotransposon huck1 and ruda retrotransposon, complete sequence Length = 152384 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ttgtggaatggtattagcac 215 |||||||||||||||||||| Sbjct: 144630 ttgtggaatggtattagcac 144649
>ref|XM_751648.1| Ustilago maydis 521 hypothetical protein (UM00594.1) partial mRNA Length = 1512 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 agtcgttggctgccaaggct 123 |||||||||||||||||||| Sbjct: 1190 agtcgttggctgccaaggct 1209
>gb|AC074132.5| Homo sapiens chromosome 5 clone CTD-2266L18, complete sequence Length = 118131 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 caagacatgtgatgtccttctccc 65 ||||||||||||| |||||||||| Sbjct: 63218 caagacatgtgatttccttctccc 63241
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 attgagcttccctacataca 289 |||||||||||||||||||| Sbjct: 5592682 attgagcttccctacataca 5592663
>gb|AC079807.5| Homo sapiens BAC clone RP11-760G15 from 2, complete sequence Length = 156175 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gtcaaagtatgggactggta 411 |||||||||||||||||||| Sbjct: 37283 gtcaaagtatgggactggta 37264
>gb|AY819983.1| Aspergillus auricomus strain CBS 61378 beta-tubulin-like gene, partial sequence Length = 578 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tgatgatgcttcatcattga 274 |||||||||||||||||||| Sbjct: 91 tgatgatgcttcatcattga 110
>gb|AY819982.1| Aspergillus auricomus strain CBS 46765 beta-tubulin-like gene, partial sequence Length = 576 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tgatgatgcttcatcattga 274 |||||||||||||||||||| Sbjct: 89 tgatgatgcttcatcattga 108
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664C05 Length = 165354 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 attgagcttccctacataca 289 |||||||||||||||||||| Sbjct: 139590 attgagcttccctacataca 139571
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tcatgccgaagaccttcaca 85 |||||||||||||||||||| Sbjct: 125543 tcatgccgaagaccttcaca 125562
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ttgtggaatggtattagcac 215 |||||||||||||||||||| Sbjct: 193389 ttgtggaatggtattagcac 193408
>gb|AC159013.2| Gallus gallus BAC clone CH261-33A3 from chromosome unknown, complete sequence Length = 166005 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tccctggaagcactcaagac 47 |||||||||||||||||||| Sbjct: 44585 tccctggaagcactcaagac 44566
>gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromosome unknown, complete sequence Length = 267345 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tccctggaagcactcaagac 47 |||||||||||||||||||| Sbjct: 38459 tccctggaagcactcaagac 38440 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,944,093 Number of Sequences: 3902068 Number of extensions: 2944093 Number of successful extensions: 44703 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44575 Number of HSP's gapped (non-prelim): 125 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)