| Clone Name | baet06e11 |
|---|---|
| Clone Library Name | barley_pub |
>T22D4_MOUSE (Q9EQN3) TSC22 domain family protein 4 (TSC22-related-inducible| leucine zipper protein 2) Length = 387 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 296 ASPPPRIPISRFELDAGGRGRPGSCFPRP 210 A PPPR+P D GGRG P + P P Sbjct: 37 AGPPPRLPNGDPNPDPGGRGTPRNGSPPP 65
>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC| 3.1.3.16) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory protein) Length = 1696 Score = 29.3 bits (64), Expect = 4.3 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = -3 Query: 268 PDSSSTPGAAGGQAHASPDRIPLP 197 P SSST GA G A A P +PLP Sbjct: 250 PPSSSTVGAVRGPARAPPADLPLP 273
>CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2 (EC| 2.7.11.22) (Galactosyltransferase-associated protein kinase p58/GTA) (Cell division cycle 2-like protein kinase 2) (CDK11) Length = 780 Score = 28.9 bits (63), Expect = 5.7 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -2 Query: 299 WASPPPRIPISRFELDAGGRGRPGSCFPRP 210 W+ PPR P RFEL G +PG P P Sbjct: 219 WSRSPPRPPRERFEL--GDGRKPGEARPAP 246
>NUPL2_CHICK (Q5ZI22) Nucleoporin-like 2| Length = 413 Score = 28.9 bits (63), Expect = 5.7 Identities = 24/86 (27%), Positives = 27/86 (31%), Gaps = 4/86 (4%) Frame = -1 Query: 381 TSSPQALE----GRSSCPLPAPSGFPSCGEDMGISSSADSYLPIXXXXXXXXXXRLMLPP 214 TSSP G SS P A F + G G +S S L + Sbjct: 272 TSSPSVPNPVGSGNSSAPSAASFSFKTSGTTSGCGTSGLSGFGSSAAANSSSTAPLPVSA 331 Query: 213 TESXXXXXXXXXXXXCSAAATGEASG 136 T S SAA T ASG Sbjct: 332 TPSAATGTSQSGASSASAAQTAGASG 357
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 Query: 268 PDSSSTPGAAGGQAHASPDRIPLPL 194 P + S PGA GG A P +PLP+ Sbjct: 282 PPARSAPGAFGGPPRAPPADLPLPV 306
>T22D4_HUMAN (Q9Y3Q8) TSC22 domain family protein 4 (TSC22-related-inducible| leucine zipper protein 2) (Tsc-22-like protein THG-1) Length = 395 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 290 PPPRIPISRFELDAGGRGRPGSCFPRP 210 PPPR+P D GG+G P + P P Sbjct: 39 PPPRLPNGEPSPDPGGKGTPRNGSPPP 65
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 268 PDSSSTPGAAGGQAHASPDRIPLPLRLASPPA 173 P S+++PGA G A AS +R +ASP A Sbjct: 34 PPSAASPGATPGSAAASAERASTAAPVASPAA 65
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 268 PDSSSTPGAAGGQAHASPDRIPLPLRLASPPA 173 P S+++PGA G A AS +R +ASP A Sbjct: 34 PPSAASPGATPGSATASAERASTAAPVASPAA 65 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,197,199 Number of Sequences: 219361 Number of extensions: 551776 Number of successful extensions: 1671 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1568 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1671 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)