>CRIP3_HUMAN (Q6Q6R5) Cysteine-rich protein 3 (CRP3) (Chromosome 6 LIM-only|
           protein) (h6LIMo)
          Length = 217

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 301 YCMTPQLKSLGC*QP-SHQLWAPPRPRARCPEGGRVP 194
           Y   P   S GC  P S   ++PPRPR   P+G + P
Sbjct: 75  YLYNPPTPSPGCTTPLSPSSFSPPRPRTGLPQGKKSP 111

>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF|
           N-terminal chain 1; HCF N-terminal chain 2; HCF
           N-terminal chain 3; HCF N-terminal chain 4; HCF
           N-terminal chain 5; HCF N-terminal chain 6; HCF
           C-terminal chain 1; HCF C-termi
          Length = 2045

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 244 WAPPRPRARCPEGGRVPCPRLGFS 173
           W   R +A+ P+ G  PCPRLG S
Sbjct: 118 WEWKRLKAKTPKNGPPPCPRLGHS 141

>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
           protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF
           N-terminal chain 2; HCF N-terminal chain 3; HCF
           N-terminal chain 4; HCF N-terminal chain 5; HCF
           N-terminal chain 6; HCF
          Length = 2090

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 244 WAPPRPRARCPEGGRVPCPRLGFS 173
           W   R +A+ P+ G  PCPRLG S
Sbjct: 118 WEWKRLKAKTPKNGPPPCPRLGHS 141

>HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
           protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1;
           HCF N-terminal chain 2; HCF N-terminal chain 3; HCF
           N-terminal chain 4; HCF N-terminal chain 5; HCF
           N-terminal chain
          Length = 2035

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 244 WAPPRPRARCPEGGRVPCPRLGFS 173
           W   R +A+ P+ G  PCPRLG S
Sbjct: 118 WEWKRLKAKTPKNGPPPCPRLGHS 141

>MYRA_MICGR (P37000) Mycinamicin-resistance protein myrA|
          Length = 295

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 295 MTPQLKSLGC*QPSHQLWAPPRPRARCPEGGRVPCPRLGF 176
           + P L+   C QP HQ  A P    RCP G      R G+
Sbjct: 5   LLPHLRCPVCGQPLHQADAAPPRALRCPAGHSFDIARQGY 44

>HCFC2_RAT (Q5RKG2) Host cell factor 2 (HCF-2) (C2 factor)|
          Length = 723

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 262 QPSHQLWAPPRPRARCPEGGRVPCPRLGFS 173
           Q S  LW   +P+   P  G  PCPRLG S
Sbjct: 104 QASRWLWKKVKPQP--PPSGLPPCPRLGHS 131

>HCFC2_HUMAN (Q9Y5Z7) Host cell factor 2 (HCF-2) (C2 factor)|
          Length = 792

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 262 QPSHQLWAPPRPRARCPEGGRVPCPRLGFS 173
           Q S  LW   +P    P  G  PCPRLG S
Sbjct: 104 QASRWLWKKVKPHP--PPSGLPPCPRLGHS 131

>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor|
           (Flamingo homolog 2) (hFmi2)
          Length = 3014

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = -2

Query: 361 MASSASRIPRPLCFVQNGQFYCMTPQLKSLGC*QPSHQLWAPPRPRARCPEGGRVPC 191
           +  + +R+   LCF   G   C   Q  +L           PPRPR RCP  GR  C
Sbjct: 120 LCGTGARLCGALCFPVPGG--CAAAQHSALAAPTTLPACRCPPRPRPRCP--GRPIC 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.307    0.125    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,616,661
Number of Sequences: 219361
Number of extensions: 911585
Number of successful extensions: 2138
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2135
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)