>gb|AY196693.1| Borrelia burgdorferi isolate PA-07 flagellin (fla) gene, partial
           cds
          Length = 332

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 gcatcccaagctcttcagctgt 287
           ||||||||||||||||||||||
Sbjct: 132 gcatcccaagctcttcagctgt 111

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 76       ccttccgccgccgccggtgag 96
                |||||||||||||||||||||
Sbjct: 19577480 ccttccgccgccgccggtgag 19577460

>dbj|AK059123.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F08,
          full insert sequence
          Length = 457

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 ccttccgccgccgccggtgag 96
          |||||||||||||||||||||
Sbjct: 61 ccttccgccgccgccggtgag 41

>dbj|AB097412.1| Triticum aestivum Wcor18 mRNA for cold regulated protein,
          complete cds
          Length = 784

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 gaagcaaaccggccggccggc 30
          |||||||||||||||||||||
Sbjct: 56 gaagcaaaccggccggccggc 76

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 76       ccttccgccgccgccggtgag 96
                |||||||||||||||||||||
Sbjct: 19503693 ccttccgccgccgccggtgag 19503673

>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     ccttccgccgccgccggtgag 96
              |||||||||||||||||||||
Sbjct: 109661 ccttccgccgccgccggtgag 109641

>gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, complete sequence
          Length = 157064

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   ggggaggggagaagccaagc 185
             ||||||||||||||||||||
Sbjct: 31957 ggggaggggagaagccaagc 31938

>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence
          Length = 270854

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   tagaggggaggggagaagcc 181
             ||||||||||||||||||||
Sbjct: 49756 tagaggggaggggagaagcc 49737

>emb|AL136438.10| Human DNA sequence from clone RP11-111G7 on chromosome 13q11-12.3
             Contains part of the ATP8A2 gene for ATPase,
             aminophospholipid transporter-like, Class I, type 8A,
             member 2 (ML-1 protein)(IB, ATP, ML-1, ATPIB,
             DKFZP434B1913), complete sequence
          Length = 178319

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   cattctgaacaaaacataaa 329
             ||||||||||||||||||||
Sbjct: 20612 cattctgaacaaaacataaa 20593

>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    cgagcccggggacggggaggcgcc 242
              |||||||| |||||||||||||||
Sbjct: 205988 cgagcccgtggacggggaggcgcc 206011

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 120     tcctctgctttccctccgccggga 143
               ||||||||||||||| ||||||||
Sbjct: 5731686 tcctctgctttccctgcgccggga 5731709

>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence
          Length = 157944

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    agaggggaggggagaagcca 182
              ||||||||||||||||||||
Sbjct: 105140 agaggggaggggagaagcca 105121

>gb|AC007326.28| Homo sapiens chromosome 22 clone p423 map 22q11, complete sequence
          Length = 102898

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   agaggggaggggagaagcca 182
             ||||||||||||||||||||
Sbjct: 55107 agaggggaggggagaagcca 55088

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      ccggccggccggccaccaac 37
               ||||||||||||||||||||
Sbjct: 7320495 ccggccggccggccaccaac 7320476

>gb|AC124861.3| Homo sapiens BAC clone RP11-622A18 from 2, complete sequence
          Length = 153731

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   agcgtagaggggaggggaga 177
             ||||||||||||||||||||
Sbjct: 91457 agcgtagaggggaggggaga 91438

>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431F01
          Length = 143209

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ccggccggccggccaccaac 37
              ||||||||||||||||||||
Sbjct: 121925 ccggccggccggccaccaac 121906

>dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22, map 22, complete
             sequences
          Length = 156630

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   aacaacacagaaactttacc 401
             ||||||||||||||||||||
Sbjct: 15102 aacaacacagaaactttacc 15121

>dbj|BS000086.1| Pan troglodytes chromosome 22 clone:PTB-102L15, map 22, complete
              sequences
          Length = 213585

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    aacaacacagaaactttacc 401
              ||||||||||||||||||||
Sbjct: 209754 aacaacacagaaactttacc 209773

>dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, section 31/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    aacaacacagaaactttacc 401
              ||||||||||||||||||||
Sbjct: 152962 aacaacacagaaactttacc 152981

>dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-42M17, complete
             sequence
          Length = 171863

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   aacaacacagaaactttacc 401
             ||||||||||||||||||||
Sbjct: 41881 aacaacacagaaactttacc 41900

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    cggctgacaacaacacagaa 393
              ||||||||||||||||||||
Sbjct: 142122 cggctgacaacaacacagaa 142141

>emb|AL133222.2|HS69P17 Homo sapiens chromosome 21 BAC RPCIP704P1769, complete sequence
          Length = 102619

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   aacaacacagaaactttacc 401
             ||||||||||||||||||||
Sbjct: 33049 aacaacacagaaactttacc 33030


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,097,382
Number of Sequences: 3902068
Number of extensions: 4097382
Number of successful extensions: 144318
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143932
Number of HSP's gapped (non-prelim): 386
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)