| Clone Name | baet06e05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AAC2_MYCTU (P0A5N0) Aminoglycoside 2'-N-acetyltransferase (EC 2.... | 28 | 6.4 | 2 | AAC2_MYCBO (P0A5N1) Aminoglycoside 2'-N-acetyltransferase (EC 2.... | 28 | 6.4 | 3 | POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein;... | 28 | 8.3 |
|---|
>AAC2_MYCTU (P0A5N0) Aminoglycoside 2'-N-acetyltransferase (EC 2.3.1.-)| (AAC(2')-Ic) Length = 181 Score = 28.1 bits (61), Expect = 6.4 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 53 LRCGLVHGVGLAGEWRG 3 LRCG V GV + +WRG Sbjct: 76 LRCGYVEGVAVRADWRG 92
>AAC2_MYCBO (P0A5N1) Aminoglycoside 2'-N-acetyltransferase (EC 2.3.1.-)| (AAC(2')-Ic) Length = 181 Score = 28.1 bits (61), Expect = 6.4 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 53 LRCGLVHGVGLAGEWRG 3 LRCG V GV + +WRG Sbjct: 76 LRCGYVEGVAVRADWRG 92
>POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein; Protease (EC| 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 1886 Score = 27.7 bits (60), Expect = 8.3 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 15/44 (34%) Frame = -1 Query: 88 GCLTASGALC---------------CAYAAGSFMALASRESGEV 2 GC+T GA+C CAYA+GSF + S E+ Sbjct: 1716 GCMTGWGAVCKWKMSKHDPRSTERICAYASGSFNPIKSTIDAEI 1759 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,964,103 Number of Sequences: 219361 Number of extensions: 247078 Number of successful extensions: 926 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 897 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 926 length of database: 80,573,946 effective HSP length: 52 effective length of database: 69,167,174 effective search space used: 1660012176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)