ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet06e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AAC2_MYCTU (P0A5N0) Aminoglycoside 2'-N-acetyltransferase (EC 2.... 28 6.4
2AAC2_MYCBO (P0A5N1) Aminoglycoside 2'-N-acetyltransferase (EC 2.... 28 6.4
3POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein;... 28 8.3

>AAC2_MYCTU (P0A5N0) Aminoglycoside 2'-N-acetyltransferase (EC 2.3.1.-)|
           (AAC(2')-Ic)
          Length = 181

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 53  LRCGLVHGVGLAGEWRG 3
           LRCG V GV +  +WRG
Sbjct: 76  LRCGYVEGVAVRADWRG 92



to top

>AAC2_MYCBO (P0A5N1) Aminoglycoside 2'-N-acetyltransferase (EC 2.3.1.-)|
           (AAC(2')-Ic)
          Length = 181

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 53  LRCGLVHGVGLAGEWRG 3
           LRCG V GV +  +WRG
Sbjct: 76  LRCGYVEGVAVRADWRG 92



to top

>POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein; Protease (EC|
            3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
            Ribonuclease H (EC 3.1.26.4)]
          Length = 1886

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 15/44 (34%)
 Frame = -1

Query: 88   GCLTASGALC---------------CAYAAGSFMALASRESGEV 2
            GC+T  GA+C               CAYA+GSF  + S    E+
Sbjct: 1716 GCMTGWGAVCKWKMSKHDPRSTERICAYASGSFNPIKSTIDAEI 1759


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,964,103
Number of Sequences: 219361
Number of extensions: 247078
Number of successful extensions: 926
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top