ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet06e03 |
|---|---|
| Clone Library Name | barley_pub |
>TALA_SHIFL (Q83QM8) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 39.7 bits (91), Expect = 0.004 Identities = 27/87 (31%), Positives = 45/87 (51%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSCDIESIRHYHPQDATANPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 375 ECNTMEKPGDRMSCYLTKALGNVGAEL 455 + N + ++ K N GAE+ Sbjct: 59 KKNGKTQE-QQVVAACDKLAVNFGAEI 84
>TALA_ECOLI (P0A867) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.9 bits (89), Expect = 0.007 Identities = 27/87 (31%), Positives = 45/87 (51%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 375 ECNTMEKPGDRMSCYLTKALGNVGAEL 455 + N + ++ K N GAE+ Sbjct: 59 KKNGKTQE-QQVVAACDKLAVNFGAEI 84
>TALA_ECOL6 (P0A868) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.9 bits (89), Expect = 0.007 Identities = 27/87 (31%), Positives = 45/87 (51%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 375 ECNTMEKPGDRMSCYLTKALGNVGAEL 455 + N + ++ K N GAE+ Sbjct: 59 KKNGKTQE-QQVVAACDKLAVNFGAEI 84
>TALA_ECO57 (P0A869) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 38.9 bits (89), Expect = 0.007 Identities = 27/87 (31%), Positives = 45/87 (51%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 375 ECNTMEKPGDRMSCYLTKALGNVGAEL 455 + N + ++ K N GAE+ Sbjct: 59 KKNGKTQE-QQVVAACDKLAVNFGAEI 84
>TAL2_SHISS (Q3YZ89) Transaldolase 2 (EC 2.2.1.2)| Length = 316 Score = 38.9 bits (89), Expect = 0.007 Identities = 27/87 (31%), Positives = 45/87 (51%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + ELD + F+ +V D+ + + P AT + SLLL AGL ++++ ID A+A G Sbjct: 1 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL--SQYEHLIDDAIAWG 58 Query: 375 ECNTMEKPGDRMSCYLTKALGNVGAEL 455 + N + ++ K N GAE+ Sbjct: 59 KKNGKTQE-QQVVAACDKLAVNFGAEI 84
>TAL_RALSO (Q8Y014) Transaldolase (EC 2.2.1.2)| Length = 319 Score = 35.0 bits (79), Expect = 0.095 Identities = 18/66 (27%), Positives = 36/66 (54%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 +T+LD + F+ +V DT F +AP AT + SL+L + +++ ++ A+ D Sbjct: 1 MTQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLIL--KAVQKAEYRPLLEQAVRDA 58 Query: 375 ECNTME 392 +++E Sbjct: 59 RSDSVE 64
>TALA_SALTY (Q8ZN83) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 33.5 bits (75), Expect = 0.28 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 375 ECN--TMEKPGDRMSCYLTKALGNVGAEL 455 + + T E+ +++ K N GAE+ Sbjct: 59 KKHGGTQEQ---QVAAASDKLAVNFGAEI 84
>TALA_SALTI (Q8Z4T0) Transaldolase A (EC 2.2.1.2)| Length = 316 Score = 33.5 bits (75), Expect = 0.28 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 375 ECN--TMEKPGDRMSCYLTKALGNVGAEL 455 + + T E+ +++ K N GAE+ Sbjct: 59 KKHGGTQEQ---QVAAASDKLAVNFGAEI 84
>TAL2_SALPA (Q5PCU4) Transaldolase 2 (EC 2.2.1.2)| Length = 316 Score = 33.5 bits (75), Expect = 0.28 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 375 ECN--TMEKPGDRMSCYLTKALGNVGAEL 455 + + T E+ +++ K N GAE+ Sbjct: 59 KKHGGTQEQ---QVAAASDKLAVNFGAEI 84
>TAL2_SALCH (Q57LN7) Transaldolase 2 (EC 2.2.1.2)| Length = 316 Score = 33.5 bits (75), Expect = 0.28 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Frame = +3 Query: 195 VTELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADG 374 + +LD + F+ +V D+ + + P AT + SLLL AGL ++ I+ A+A G Sbjct: 1 MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGL--EQYGHLIEDAIAWG 58 Query: 375 ECN--TMEKPGDRMSCYLTKALGNVGAEL 455 + + T E+ +++ K N GAE+ Sbjct: 59 KKHGGTQEQ---QVAAASDKLAVNFGAEI 84
>YMD5_CAEEL (P34459) Hypothetical protein F54H12.5| Length = 880 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -1 Query: 343 LNLVSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTISLKLETTSSS 200 L+ + +P P+NS++ +G N S +S TT TIS T SS Sbjct: 331 LDFIKHAPTSPNNSKDPAKRFIGFNSSGASPTTPETTISSSDSTNESS 378
>RTBDN_SPETR (Q5DRQ5) Retbindin precursor| Length = 254 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +2 Query: 5 PSSTHGALHFRTHLISLPPRPSPGRQV-ELVTKLG*ARGFQPPEAGSGGTG 154 P + G+ H ISL PRP PGR E +++ RG +AG G+G Sbjct: 197 PVAAPGSRHCLNISISLLPRPRPGRWARETISQRSRRRGTGILDAGGSGSG 247
>TAL_COLP3 (Q47WR3) Transaldolase (EC 2.2.1.2)| Length = 320 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +3 Query: 198 TELDVVSSFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPD 332 ++L + + +V DT + KF P AT + SLLL A LP+ Sbjct: 6 SQLAQLKQMTTVVADTGDIEAIAKFQPQDATTNPSLLLKAASLPN 50
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 30.0 bits (66), Expect = 3.1 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Frame = -1 Query: 457 ASSAPTFPRALVR*QDIRSPGFSIVLHSPSANAVSMALLNLVSGSPAIPSNSEELTVA-- 284 ASS+P+ A SP S SPS++A S + + + S + PS+S + A Sbjct: 465 ASSSPSSSAAS------SSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPS 518 Query: 283 --AVGANFSKSSKTTVSGTISLKLETTSSSVT 194 A ++ S SS ++ + T + + TT+++ T Sbjct: 519 SSASSSSASSSSASSAATTAATTIATTAATTT 550 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = -1 Query: 376 SPSANAVSMALLNLVSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTISLKLETTSSSV 197 SPS++A S + + + S + PS+S + A+ ++ + S+ TT + TI+ TT+++ Sbjct: 496 SPSSSASSSSAPSSSASSSSAPSSSASSSSAS--SSSASSAATTAATTIATTAATTTATT 553 Query: 196 T 194 T Sbjct: 554 T 554
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 3 IPAPPMALSISAPTSSPFLPAPRQAGRW 86 +P P ++ S P F P PR AG W Sbjct: 186 VPPTPAPMATSQPEEDSFGPGPRPAGEW 213
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +3 Query: 6 PAPPMALSISAPTSSPFLPAPRQAGRWSSLPSSAKP 113 P PP AL SAP+ P P P AG + P P Sbjct: 341 PPPPPALPSSAPSGPPPPPPPSMAGSTAPPPPPPPP 376
>PI4K_DICDI (P54677) Phosphatidylinositol 4-kinase (EC 2.7.1.67) (PI4-kinase)| (PtdIns-4-kinase) (PI4K-alpha) Length = 1093 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/87 (26%), Positives = 42/87 (48%) Frame = -1 Query: 454 SSAPTFPRALVR*QDIRSPGFSIVLHSPSANAVSMALLNLVSGSPAIPSNSEELTVAAVG 275 +++PT P + + I SI P S L NL+S S AI S++ + + Sbjct: 700 ATSPTLPINIPHSKLINDGSNSISKSLPVTPTQSTVLNNLISTSTAISPPSQQQQLPS-P 758 Query: 274 ANFSKSSKTTVSGTISLKLETTSSSVT 194 +N + ++ TT + T + TT+++ T Sbjct: 759 SNTTTTTTTTTTNTNNTTTTTTTTTTT 785
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = +3 Query: 6 PAPPMALSISAPTSSPFL--PAPRQAGRWSSLPSSAKP 113 PAPP + S +P+S+P PAP S++P S+ P Sbjct: 218 PAPPKSTSPVSPSSAPMTSPPAPMAPKSSSTIPPSSAP 255
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +2 Query: 50 SLPPRPSPGRQVELVTKLG*ARGFQPPE-AGSGGTGR 157 S+PPRP+PG + + G + G +P G+ G GR Sbjct: 249 SMPPRPNPGAMPQRTPRPGPSAGGRPGRPGGAPGAGR 285
>MOT8_MOUSE (O70324) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) Length = 565 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +2 Query: 59 PRPSPGRQVELVTKLG*ARGFQPPEAGSG 145 P P+P V G ARGFQPPE G G Sbjct: 103 PEPTP-----TVETRGTARGFQPPEGGFG 126
>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) (MCT 7) Length = 613 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +2 Query: 59 PRPSPGRQVELVTKLG*ARGFQPPEAGSG 145 P P+P V G ARGFQPPE G G Sbjct: 151 PEPTP-----TVETRGTARGFQPPEGGFG 174
>SYFB_RICCN (Q92I38) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 818 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = +3 Query: 270 FAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGECNTMEKPGDRMSCYLTKALG 437 F A ++++L+L I G + + GE + +KP D +CYL K G Sbjct: 391 FTEKALDIATNLILSICG------NGEVSEVVKVGEKESQKKPLDFSACYLEKITG 440
>EXTL3_MOUSE (Q9WVL6) Exostosin-like 3 (EC 2.4.1.-) (Multiple exostosis-like| protein 3) Length = 918 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2 Query: 8 SSTHGALHFRTHLISLPPRPSPGRQVELVTKLG*ARGFQPPEAGSGGTGRRRQRAL 175 +S G H H P PS + LG GF+P G+GG+G+ Q AL Sbjct: 604 NSAPGRFHLFPHTPFDPVLPSEAKF------LGSGTGFRPIGGGAGGSGKEFQAAL 653
>TOLB_PHOPR (Q6LP47) Protein tolB precursor| Length = 449 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/67 (23%), Positives = 29/67 (43%) Frame = -1 Query: 397 GFSIVLHSPSANAVSMALLNLVSGSPAIPSNSEELTVAAVGANFSKSSKTTVSGTISLKL 218 GF+I AV + + SP+I N + ++V ++ S ++ G +L Sbjct: 374 GFNIAKQDLKTGAVQILTKTFLDESPSIAPNGGMVIYSSVNNKSNELSLVSIDGRFKARL 433 Query: 217 ETTSSSV 197 TT+ V Sbjct: 434 PTTNGRV 440 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,574,189 Number of Sequences: 219361 Number of extensions: 1177409 Number of successful extensions: 4191 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3962 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4178 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
