ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet06d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186268.1| Oryza sativa (japonica cultivar-group), mRNA 236 5e-59
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 236 5e-59
3dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic D... 236 5e-59
4gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 44 0.39
5gb|AC092929.5| Homo sapiens 3 BAC RP11-569L16 (Roswell Park Canc... 44 0.39
6emb|AJ341884.1|HSA341884 Homo sapiens genomic sequence surroundi... 44 0.39
7gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.39
8gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, com... 42 1.5
9gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.5
10gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
11gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
12gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genom... 42 1.5
13ref|XM_367042.1| Magnaporthe grisea 70-15 chromosome V hypotheti... 42 1.5
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.5
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
16gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom... 42 1.5
17gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome... 42 1.5
18emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.5
19gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, co... 42 1.5
20gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, com... 42 1.5
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
25dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AK108776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
27emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chr... 42 1.5
28gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
29gb|BC097135.1| Danio rerio translocation protein 1, mRNA (cDNA c... 40 6.0
30ref|XM_956743.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
31ref|XM_958799.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
32ref|XM_327300.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
33ref|XM_330232.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
34gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.0
35emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ... 40 6.0
36emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in ... 40 6.0
37gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.0
38emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in ... 40 6.0
39gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 6.0
40gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequ... 40 6.0
41gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 o... 40 6.0
42ref|NM_001025530.1| Danio rerio translocation protein 1 (tloc1),... 40 6.0
43dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.0
44dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.0
45emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 6.0
46gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (N... 40 6.0 
>ref|NM_186268.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 717

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Plus

                                                                       
Query: 210 ggtgcagccgaagatgatcataaaggggatgctgggccggtacgagcggtggaaccctgt 269
           |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||| ||
Sbjct: 201 ggtgaagccgaggatgataatcaaggggatgctggggaggtacgagaggtggaaccccgt 260

                                                                       
Query: 270 gcacccgacggcgggcgccttctggggcgtcgggctggggttcggctgcggcgtcgggtg 329
           ||||||||||| |||  | ||||||||  ||||||||||| |||| ||||| || |||||
Sbjct: 261 gcacccgacggtgggtacgttctgggggatcgggctggggctcgggtgcggggttgggtg 320

                                                                       
Query: 330 gggcccggggtttggacccgaggtcatcggctacgtcggcgccggatgcggcgtcggatt 389
           ||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 321 ggggcctgggttcgggcccgaggtcatcggctacgtcggcgccggctgcggcgtcgggtt 380

                                                                      
Query: 390 cagcgtcggcatcacgctcgccggtgtcggcgtcgggctgccacagcacggcatcatca 448
           |||||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||
Sbjct: 381 cagcgtcggcgtcacgctcgccggcgtcggcgtcggcttgccgcagcacggcctcatca 439
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Minus

                                                                           
Query: 210     ggtgcagccgaagatgatcataaaggggatgctgggccggtacgagcggtggaaccctgt 269
               |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||| ||
Sbjct: 2256762 ggtgaagccgaggatgataatcaaggggatgctggggaggtacgagaggtggaaccccgt 2256703

                                                                           
Query: 270     gcacccgacggcgggcgccttctggggcgtcgggctggggttcggctgcggcgtcgggtg 329
               ||||||||||| |||  | ||||||||  ||||||||||| |||| ||||| || |||||
Sbjct: 2256702 gcacccgacggtgggtacgttctgggggatcgggctggggctcgggtgcggggttgggtg 2256643

                                                                           
Query: 330     gggcccggggtttggacccgaggtcatcggctacgtcggcgccggatgcggcgtcggatt 389
               ||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 2256642 ggggcctgggttcgggcccgaggtcatcggctacgtcggcgccggctgcggcgtcgggtt 2256583

                                                                          
Query: 390     cagcgtcggcatcacgctcgccggtgtcggcgtcgggctgccacagcacggcatcatca 448
               |||||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||
Sbjct: 2256582 cagcgtcggcgtcacgctcgccggcgtcggcgtcggcttgccgcagcacggcctcatca 2256524
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>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_B12
          Length = 121362

 Score =  236 bits (119), Expect = 5e-59
 Identities = 209/239 (87%)
 Strand = Plus / Minus

                                                                         
Query: 210   ggtgcagccgaagatgatcataaaggggatgctgggccggtacgagcggtggaaccctgt 269
             |||| |||||| |||||| || ||||||||||||||  |||||||| |||||||||| ||
Sbjct: 30461 ggtgaagccgaggatgataatcaaggggatgctggggaggtacgagaggtggaaccccgt 30402

                                                                         
Query: 270   gcacccgacggcgggcgccttctggggcgtcgggctggggttcggctgcggcgtcgggtg 329
             ||||||||||| |||  | ||||||||  ||||||||||| |||| ||||| || |||||
Sbjct: 30401 gcacccgacggtgggtacgttctgggggatcgggctggggctcgggtgcggggttgggtg 30342

                                                                         
Query: 330   gggcccggggtttggacccgaggtcatcggctacgtcggcgccggatgcggcgtcggatt 389
             ||| || ||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 30341 ggggcctgggttcgggcccgaggtcatcggctacgtcggcgccggctgcggcgtcgggtt 30282

                                                                        
Query: 390   cagcgtcggcatcacgctcgccggtgtcggcgtcgggctgccacagcacggcatcatca 448
             |||||||||| ||||||||||||| |||||||||||  |||| ||||||||| ||||||
Sbjct: 30281 cagcgtcggcgtcacgctcgccggcgtcggcgtcggcttgccgcagcacggcctcatca 30223
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 404     cgctcgccggtgtcggcgtcgg 425
               ||||||||||||||||||||||
Sbjct: 5800849 cgctcgccggtgtcggcgtcgg 5800828
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>gb|AC092929.5| Homo sapiens 3 BAC RP11-569L16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 120070

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 99    ccaccaacccccgcccccaacc 120
             ||||||||||||||||||||||
Sbjct: 59657 ccaccaacccccgcccccaacc 59636
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>emb|AJ341884.1|HSA341884 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-EB9RS
          Length = 715

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 111 gcccccaaccgatccaaaccctgttg 136
           ||||||||||||||||||| ||||||
Sbjct: 610 gcccccaaccgatccaaactctgttg 635
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 363     cgtcggcgccggatgcggcgtcggat 388
               |||||||||||| |||||||||||||
Sbjct: 2146025 cgtcggcgccggctgcggcgtcggat 2146000



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 364     gtcggcgccggatgcggcgtcggat 388
               ||||||||||| |||||||||||||
Sbjct: 2162227 gtcggcgccggctgcggcgtcggat 2162203



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 405    gctcgccggtgtcggcgtcg 424
              ||||||||||||||||||||
Sbjct: 881072 gctcgccggtgtcggcgtcg 881053
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>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence
          Length = 161504

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     tccaccaacccccgcccccaa 118
              |||||||||||||||||||||
Sbjct: 121933 tccaccaacccccgcccccaa 121953
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 354     catcggctacgtcggcgccgg 374
               |||||||||||||||||||||
Sbjct: 4142748 catcggctacgtcggcgccgg 4142768
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>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0025K21, complete sequence
          Length = 146539

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   ccgttgccgctgccgttgccg 192
             |||||||||||||||||||||
Sbjct: 13735 ccgttgccgctgccgttgccg 13755
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
             complete sequence
          Length = 157609

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   ccgttgccgctgccgttgccg 192
             |||||||||||||||||||||
Sbjct: 39718 ccgttgccgctgccgttgccg 39738
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>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete
             sequence
          Length = 150743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   ccccgttgccgctgccgttgc 190
             |||||||||||||||||||||
Sbjct: 96125 ccccgttgccgctgccgttgc 96145
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>ref|XM_367042.1| Magnaporthe grisea 70-15 chromosome V hypothetical protein
           (MG10672.4) partial mRNA
          Length = 2118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 172 ccgttgccgctgccgttgccg 192
           |||||||||||||||||||||
Sbjct: 362 ccgttgccgctgccgttgccg 342
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 172     ccgttgccgctgccgttgccg 192
               |||||||||||||||||||||
Sbjct: 3248378 ccgttgccgctgccgttgccg 3248398
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 170      ccccgttgccgctgccgttgc 190
                |||||||||||||||||||||
Sbjct: 31584542 ccccgttgccgctgccgttgc 31584522
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>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence,
            complete sequence
          Length = 133449

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 170  ccccgttgccgctgccgttgc 190
            |||||||||||||||||||||
Sbjct: 8064 ccccgttgccgctgccgttgc 8084
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>gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome 14, complete sequence
          Length = 198078

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 103    caacccccgcccccaaccgatccaaaccc 131
              |||||||||||||||||| | ||||||||
Sbjct: 130715 caacccccgcccccaaccaaaccaaaccc 130687
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 172     ccgttgccgctgccgttgccg 192
               |||||||||||||||||||||
Sbjct: 2978180 ccgttgccgctgccgttgccg 2978200
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>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence
          Length = 161276

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 97   atccaccaacccccgccccca 117
            |||||||||||||||||||||
Sbjct: 7092 atccaccaacccccgccccca 7112
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>gb|AC010998.14| Homo sapiens chromosome 10 clone RP11-95I16, complete sequence
          Length = 146833

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     atccaccaacccccgccccca 117
              |||||||||||||||||||||
Sbjct: 105728 atccaccaacccccgccccca 105748
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      ccgttgccgctgccgttgccg 192
                |||||||||||||||||||||
Sbjct: 17285018 ccgttgccgctgccgttgccg 17285038
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 170      ccccgttgccgctgccgttgc 190
                |||||||||||||||||||||
Sbjct: 31675048 ccccgttgccgctgccgttgc 31675028
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 161      gcaatccggccccgttgccgctgccgttgccgg 193
                |||||| ||||||| ||||||||||| ||||||
Sbjct: 19638328 gcaatctggccccgctgccgctgccgctgccgg 19638296
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 236     ggatgctgggccggtacgagc 256
               |||||||||||||||||||||
Sbjct: 1960996 ggatgctgggccggtacgagc 1961016



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 422     tcgggctgccacagcacggc 441
               ||||||||||||||||||||
Sbjct: 3284211 tcgggctgccacagcacggc 3284192
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0605D08
          Length = 144340

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 161    gcaatccggccccgttgccgctgccgttgccgg 193
              |||||| ||||||| ||||||||||| ||||||
Sbjct: 104614 gcaatctggccccgctgccgctgccgctgccgg 104582
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>dbj|AK108776.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H12, full
           insert sequence
          Length = 1288

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 170 ccccgttgccgctgccgttgc 190
           |||||||||||||||||||||
Sbjct: 93  ccccgttgccgctgccgttgc 73
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>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete
             sequence
          Length = 215157

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 103   caacccccgcccccaaccgatccaaaccc 131
             |||||||||||||||||| | ||||||||
Sbjct: 80030 caacccccgcccccaaccaaaccaaaccc 80002
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      ccgttgccgctgccgttgccg 192
                |||||||||||||||||||||
Sbjct: 17378663 ccgttgccgctgccgttgccg 17378683
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>gb|BC097135.1| Danio rerio translocation protein 1, mRNA (cDNA clone MGC:114073
           IMAGE:7438160), complete cds
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gccccaccaaatccaccaac 106
           ||||||||||||||||||||
Sbjct: 154 gccccaccaaatccaccaac 173
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>ref|XM_956743.1| Neurospora crassa OR74A hypothetical protein (NCU07015.1) partial
            mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  tgctgggccggtacgagcgg 258
            ||||||||||||||||||||
Sbjct: 1491 tgctgggccggtacgagcgg 1472
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>ref|XM_958799.1| Neurospora crassa OR74A hypothetical protein (NCU03046.1) partial
            mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  gggcgccttctggggcgtcg 301
            ||||||||||||||||||||
Sbjct: 2071 gggcgccttctggggcgtcg 2052
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>ref|XM_327300.1| Neurospora crassa OR74A hypothetical protein (NCU07015.1) partial
            mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  tgctgggccggtacgagcgg 258
            ||||||||||||||||||||
Sbjct: 1491 tgctgggccggtacgagcgg 1472
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>ref|XM_330232.1| Neurospora crassa OR74A hypothetical protein (NCU03046.1) partial
            mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  gggcgccttctggggcgtcg 301
            ||||||||||||||||||||
Sbjct: 2071 gggcgccttctggggcgtcg 2052
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     atcggctacgtcggcgccgg 374
               ||||||||||||||||||||
Sbjct: 1126214 atcggctacgtcggcgccgg 1126195
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>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   cggcgggcgccttctggggcgtcg 301
             |||||||| |||||||||||||||
Sbjct: 45920 cggcgggcaccttctggggcgtcg 45943
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>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2,
             complete sequence
          Length = 249584

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    gccccaccaaatccaccaac 106
             ||||||||||||||||||||
Sbjct: 82585 gccccaccaaatccaccaac 82566
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 164     atccggccccgttgccgctg 183
               ||||||||||||||||||||
Sbjct: 1043865 atccggccccgttgccgctg 1043884
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>emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in linkage group 2, complete
              sequence
          Length = 228024

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     gccccaccaaatccaccaac 106
              ||||||||||||||||||||
Sbjct: 148108 gccccaccaaatccaccaac 148089
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     gcggtgccgccggtgcagcc 218
               ||||||||||||||||||||
Sbjct: 3524432 gcggtgccgccggtgcagcc 3524451
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>gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequence
          Length = 124024

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   ccgttgccgctgccgttgcc 191
             ||||||||||||||||||||
Sbjct: 22686 ccgttgccgctgccgttgcc 22705
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>gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 of the complete
            genome
          Length = 12776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  atcggctacgtcggcgccgg 374
            ||||||||||||||||||||
Sbjct: 9457 atcggctacgtcggcgccgg 9438
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>ref|NM_001025530.1| Danio rerio translocation protein 1 (tloc1), mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gccccaccaaatccaccaac 106
           ||||||||||||||||||||
Sbjct: 154 gccccaccaaatccaccaac 173
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 347     ccgaggtcatcggctacgtc 366
               ||||||||||||||||||||
Sbjct: 6375432 ccgaggtcatcggctacgtc 6375413
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 411     cggtgtcggcgtcgggctgc 430
               ||||||||||||||||||||
Sbjct: 4213011 cggtgtcggcgtcgggctgc 4213030
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    ccccgttgccgctgccgttg 189
              ||||||||||||||||||||
Sbjct: 599104 ccccgttgccgctgccgttg 599085
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>gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (NF1), A-kinase anchor protein
             (AKAP84), BAW protein (BAW), and WSB1 protein (WSB1)
             genes, complete cds
          Length = 49254

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   gttgccgctgccgttgccgg 193
             ||||||||||||||||||||
Sbjct: 18575 gttgccgctgccgttgccgg 18594


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,688,379
Number of Sequences: 3902068
Number of extensions: 2688379
Number of successful extensions: 62745
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61436
Number of HSP's gapped (non-prelim): 1306
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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