ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet06c07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121808.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097N14, full insert sequence Length = 2037 Score = 278 bits (140), Expect = 2e-71 Identities = 363/436 (83%), Gaps = 1/436 (0%) Strand = Plus / Plus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 267 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 326 Query: 97 ggatgggagagggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagc 156 ||||||| ||||||||||| ||| | || ||||||||||| ||||||||||||||||||| Sbjct: 327 ggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagc 386 Query: 157 tggccctccccgccctccgcgacggcgacggcgggcaggccctcacgcgagccctcgcgg 216 | |||||||||||||||||||||||||||||||| | ||| ||| | || || ||||| Sbjct: 387 tcgccctccccgccctccgcgacggcgacggcggccgggctctcgcccgcgcgctcgcta 446 Query: 217 tggccgcgaccttagccgaccttcagatggatgcggaa-ttatttcagccggcatattga 275 | ||||| || | |||||||| |||||||| || ||| ||||||||||||| ||| ||| Sbjct: 447 tcgccgcctccctcgccgacctccagatggacgccgaagttatttcagccggaatactga 506 Query: 276 ggaaagcgcttgatgcagggactataagcatcagcgatgtagaagctcaaattgggactg 335 || |||| ||||||||||| | |||||||| || ||||| || || | ||||||| Sbjct: 507 gggaagcacttgatgcaggagcaataagcatgagggatgtcaaatctgagattgggatca 566 Query: 336 gcatagctgatttactgcatgagagcttaaggcttaaggttgctccttcgaaggtcgacg 395 ||| |||| |||| ||||| ||||| ||| |||||||| ||| ||||| ||| | || | Sbjct: 567 gcacagctcatttgctgcacgagagtttacggcttaagcatgccccttcaaagcttgatg 626 Query: 396 tattggatgatgaaagtgcgagctcattgagaaaagttttcctttcgtactatgacatcc 455 || | |||||||||||||| || |||||||||| ||| ||||| ||||||||||||| Sbjct: 627 tacttgatgatgaaagtgcaagtgcattgagaaagttttgtctttcttactatgacatcc 686 Query: 456 gggcagtaatcttgga 471 | ||||| |||||||| Sbjct: 687 gagcagttatcttgga 702
>dbj|AB042936.1| Oryza sativa (japonica cultivar-group) Os-RelA2 mRNA for chloroplast RelA homologue 2, complete cds Length = 1982 Score = 278 bits (140), Expect = 2e-71 Identities = 363/436 (83%), Gaps = 1/436 (0%) Strand = Plus / Plus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 250 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 309 Query: 97 ggatgggagagggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagc 156 ||||||| ||||||||||| ||| | || ||||||||||| ||||||||||||||||||| Sbjct: 310 ggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagc 369 Query: 157 tggccctccccgccctccgcgacggcgacggcgggcaggccctcacgcgagccctcgcgg 216 | |||||||||||||||||||||||||||||||| | ||| ||| | || || ||||| Sbjct: 370 tcgccctccccgccctccgcgacggcgacggcggccgggctctcgcccgcgcgctcgcta 429 Query: 217 tggccgcgaccttagccgaccttcagatggatgcggaa-ttatttcagccggcatattga 275 | ||||| || | |||||||| |||||||| || ||| ||||||||||||| ||| ||| Sbjct: 430 tcgccgcctccctcgccgacctccagatggacgccgaagttatttcagccggaatactga 489 Query: 276 ggaaagcgcttgatgcagggactataagcatcagcgatgtagaagctcaaattgggactg 335 || |||| ||||||||||| | |||||||| || ||||| || || | ||||||| Sbjct: 490 gggaagcacttgatgcaggagcaataagcatgagggatgtcaaatctgagattgggatca 549 Query: 336 gcatagctgatttactgcatgagagcttaaggcttaaggttgctccttcgaaggtcgacg 395 ||| |||| |||| ||||| ||||| ||| |||||||| ||| ||||| ||| | || | Sbjct: 550 gcacagctcatttgctgcacgagagtttacggcttaagcatgccccttcaaagcttgatg 609 Query: 396 tattggatgatgaaagtgcgagctcattgagaaaagttttcctttcgtactatgacatcc 455 || | |||||||||||||| || |||||||||| ||| ||||| ||||||||||||| Sbjct: 610 tacttgatgatgaaagtgcaagtgcattgagaaagttttgtctttcttactatgacatcc 669 Query: 456 gggcagtaatcttgga 471 | ||||| |||||||| Sbjct: 670 gagcagttatcttgga 685
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 202 bits (102), Expect = 7e-49 Identities = 141/154 (91%) Strand = Plus / Plus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 176854 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 176913 Query: 97 ggatgggagagggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagc 156 ||||||| ||||||||||| ||| | || ||||||||||| ||||||||||||||||||| Sbjct: 176914 ggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagc 176973 Query: 157 tggccctccccgccctccgcgacggcgacggcgg 190 | |||||||||||||||||||||||||||||||| Sbjct: 176974 tcgccctccccgccctccgcgacggcgacggcgg 177007
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 202 bits (102), Expect = 7e-49 Identities = 141/154 (91%) Strand = Plus / Plus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 113003 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 113062 Query: 97 ggatgggagagggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagc 156 ||||||| ||||||||||| ||| | || ||||||||||| ||||||||||||||||||| Sbjct: 113063 ggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagc 113122 Query: 157 tggccctccccgccctccgcgacggcgacggcgg 190 | |||||||||||||||||||||||||||||||| Sbjct: 113123 tcgccctccccgccctccgcgacggcgacggcgg 113156 Score = 99.6 bits (50), Expect = 8e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 48 gggcggctggtggcggagcttgtgggagtgttcaacgagctcacggctaggatgggagag 107 ||||||||| ||||||||||| | || |||||||| | || |||| ||||||| ||| Sbjct: 143694 gggcggctgatggcggagcttcttggcgtgttcaatggactgacggagcggatgggggag 143753 Query: 108 ggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagctggccctcccc 167 | | |||||||| | || |||||||| || ||||||||||||||||||||||| || ||| Sbjct: 143754 gacgtggcgacctcgtcgtcgtcgcggcttctcttccgcgcgctcaagctggcgcttccc 143813 Query: 168 gccctccgcgacggcgacggcg 189 || ||||||||||||| ||||| Sbjct: 143814 gcgctccgcgacggcggcggcg 143835 Score = 97.6 bits (49), Expect = 3e-17 Identities = 175/217 (80%) Strand = Plus / Plus Query: 255 ttatttcagccggcatattgaggaaagcgcttgatgcagggactataagcatcagcgatg 314 ||||||||||||| ||| ||||| |||| ||||||||||| | |||||||| || |||| Sbjct: 114269 ttatttcagccggaatactgagggaagcacttgatgcaggagcaataagcatgagggatg 114328 Query: 315 tagaagctcaaattgggactggcatagctgatttactgcatgagagcttaaggcttaagg 374 | || || | ||||||| ||| |||| |||| ||||| ||||| ||| |||||||| Sbjct: 114329 tcaaatctgagattgggatcagcacagctcatttgctgcacgagagtttacggcttaagc 114388 Query: 375 ttgctccttcgaaggtcgacgtattggatgatgaaagtgcgagctcattgagaaaagttt 434 ||| ||||| ||| | || ||| | |||||||||||||| || |||||||||| ||| Sbjct: 114389 atgccccttcaaagcttgatgtacttgatgatgaaagtgcaagtgcattgagaaagtttt 114448 Query: 435 tcctttcgtactatgacatccgggcagtaatcttgga 471 ||||| |||||||||||||| ||||| |||||||| Sbjct: 114449 gtctttcttactatgacatccgagcagttatcttgga 114485 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 ctcttccgcgcgctcaagctggccctccccgccctccgcgacggcgacggcgg 190 ||||||||||||||||||||||| || ||||| |||||||||| || |||||| Sbjct: 131983 ctcttccgcgcgctcaagctggcgctgcccgcgctccgcgacgccgccggcgg 132035
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 202 bits (102), Expect = 7e-49 Identities = 141/154 (91%) Strand = Plus / Plus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 114655 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 114714 Query: 97 ggatgggagagggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagc 156 ||||||| ||||||||||| ||| | || ||||||||||| ||||||||||||||||||| Sbjct: 114715 ggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagc 114774 Query: 157 tggccctccccgccctccgcgacggcgacggcgg 190 | |||||||||||||||||||||||||||||||| Sbjct: 114775 tcgccctccccgccctccgcgacggcgacggcgg 114808 Score = 97.6 bits (49), Expect = 3e-17 Identities = 175/217 (80%) Strand = Plus / Plus Query: 255 ttatttcagccggcatattgaggaaagcgcttgatgcagggactataagcatcagcgatg 314 ||||||||||||| ||| ||||| |||| ||||||||||| | |||||||| || |||| Sbjct: 115921 ttatttcagccggaatactgagggaagcacttgatgcaggagcaataagcatgagggatg 115980 Query: 315 tagaagctcaaattgggactggcatagctgatttactgcatgagagcttaaggcttaagg 374 | || || | ||||||| ||| |||| |||| ||||| ||||| ||| |||||||| Sbjct: 115981 tcaaatctgagattgggatcagcacagctcatttgctgcacgagagtttacggcttaagc 116040 Query: 375 ttgctccttcgaaggtcgacgtattggatgatgaaagtgcgagctcattgagaaaagttt 434 ||| ||||| ||| | || ||| | |||||||||||||| || |||||||||| ||| Sbjct: 116041 atgccccttcaaagcttgatgtacttgatgatgaaagtgcaagtgcattgagaaagtttt 116100 Query: 435 tcctttcgtactatgacatccgggcagtaatcttgga 471 ||||| |||||||||||||| ||||| |||||||| Sbjct: 116101 gtctttcttactatgacatccgagcagttatcttgga 116137
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 202 bits (102), Expect = 7e-49 Identities = 141/154 (91%) Strand = Plus / Plus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 3547372 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 3547431 Query: 97 ggatgggagagggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagc 156 ||||||| ||||||||||| ||| | || ||||||||||| ||||||||||||||||||| Sbjct: 3547432 ggatgggggagggcctggccacctcgtcgtcgtcgcgcctcctcttccgcgcgctcaagc 3547491 Query: 157 tggccctccccgccctccgcgacggcgacggcgg 190 | |||||||||||||||||||||||||||||||| Sbjct: 3547492 tcgccctccccgccctccgcgacggcgacggcgg 3547525 Score = 99.6 bits (50), Expect = 8e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 48 gggcggctggtggcggagcttgtgggagtgttcaacgagctcacggctaggatgggagag 107 ||||||||| ||||||||||| | || |||||||| | || |||| ||||||| ||| Sbjct: 3578063 gggcggctgatggcggagcttcttggcgtgttcaatggactgacggagcggatgggggag 3578122 Query: 108 ggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagctggccctcccc 167 | | |||||||| | || |||||||| || ||||||||||||||||||||||| || ||| Sbjct: 3578123 gacgtggcgacctcgtcgtcgtcgcggcttctcttccgcgcgctcaagctggcgcttccc 3578182 Query: 168 gccctccgcgacggcgacggcg 189 || ||||||||||||| ||||| Sbjct: 3578183 gcgctccgcgacggcggcggcg 3578204 Score = 97.6 bits (49), Expect = 3e-17 Identities = 175/217 (80%) Strand = Plus / Plus Query: 255 ttatttcagccggcatattgaggaaagcgcttgatgcagggactataagcatcagcgatg 314 ||||||||||||| ||| ||||| |||| ||||||||||| | |||||||| || |||| Sbjct: 3548638 ttatttcagccggaatactgagggaagcacttgatgcaggagcaataagcatgagggatg 3548697 Query: 315 tagaagctcaaattgggactggcatagctgatttactgcatgagagcttaaggcttaagg 374 | || || | ||||||| ||| |||| |||| ||||| ||||| ||| |||||||| Sbjct: 3548698 tcaaatctgagattgggatcagcacagctcatttgctgcacgagagtttacggcttaagc 3548757 Query: 375 ttgctccttcgaaggtcgacgtattggatgatgaaagtgcgagctcattgagaaaagttt 434 ||| ||||| ||| | || ||| | |||||||||||||| || |||||||||| ||| Sbjct: 3548758 atgccccttcaaagcttgatgtacttgatgatgaaagtgcaagtgcattgagaaagtttt 3548817 Query: 435 tcctttcgtactatgacatccgggcagtaatcttgga 471 ||||| |||||||||||||| ||||| |||||||| Sbjct: 3548818 gtctttcttactatgacatccgagcagttatcttgga 3548854 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 ctcttccgcgcgctcaagctggccctccccgccctccgcgacggcgacggcgg 190 ||||||||||||||||||||||| || ||||| |||||||||| || |||||| Sbjct: 3566352 ctcttccgcgcgctcaagctggcgctgcccgcgctccgcgacgccgccggcgg 3566404
>gb|AY023065.1| Oryza sativa microsatellite MRG5390 containing (GAC)X8, genomic sequence Length = 224 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 37 cggagggaggagggcggctggtggcggagcttgtgggagtgttcaacgagctcacggcta 96 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| |||| | Sbjct: 92 cggagggaggagggcggctggtggcggagctggtgggcgcgttcaacgagctgacgggga 33 Query: 97 ggatgggagagggcctggc 115 ||||||| ||||||||||| Sbjct: 32 ggatgggggagggcctggc 14
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 99.6 bits (50), Expect = 8e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 48 gggcggctggtggcggagcttgtgggagtgttcaacgagctcacggctaggatgggagag 107 ||||||||| ||||||||||| | || |||||||| | || |||| ||||||| ||| Sbjct: 410 gggcggctgatggcggagcttcttggcgtgttcaatggactgacggagcggatgggggag 469 Query: 108 ggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagctggccctcccc 167 | | |||||||| | || |||||||| || ||||||||||||||||||||||| || ||| Sbjct: 470 gacgtggcgacctcgtcgtcgtcgcggcttctcttccgcgcgctcaagctggcgcttccc 529 Query: 168 gccctccgcgacggcgacggcg 189 || ||||||||||||| ||||| Sbjct: 530 gcgctccgcgacggcggcggcg 551
>dbj|AK110850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-C05, full insert sequence Length = 1874 Score = 99.6 bits (50), Expect = 8e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 48 gggcggctggtggcggagcttgtgggagtgttcaacgagctcacggctaggatgggagag 107 ||||||||| ||||||||||| | || |||||||| | || |||| ||||||| ||| Sbjct: 1538 gggcggctgatggcggagcttcttggcgtgttcaatggactgacggagcggatgggggag 1479 Query: 108 ggcctggcgaccacctcctcgtcgcgcctgctcttccgcgcgctcaagctggccctcccc 167 | | |||||||| | || |||||||| || ||||||||||||||||||||||| || ||| Sbjct: 1478 gacgtggcgacctcgtcgtcgtcgcggcttctcttccgcgcgctcaagctggcgcttccc 1419 Query: 168 gccctccgcgacggcgacggcg 189 || ||||||||||||| ||||| Sbjct: 1418 gcgctccgcgacggcggcggcg 1397
>dbj|AK058438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F09, full insert sequence Length = 2062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 138 ctcttccgcgcgctcaagctggccctccccgccctccgcgacggcgacggcgg 190 ||||||||||||||||||||||| || ||||| |||||||||| || |||||| Sbjct: 354 ctcttccgcgcgctcaagctggcgctgcccgcgctccgcgacgccgccggcgg 406
>gb|DQ213239.1| Taeniopygia guttata clone 0061P0006F04 RIKEN cDNA 1110063F24-like mRNA, complete sequence Length = 880 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 gggaggagggcggctggtggcggagct 67 ||||||| ||||||||||||||||||| Sbjct: 23 gggaggacggcggctggtggcggagct 49
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 ccgcgacggcgacggcgggcag 194 |||||||||||||||||||||| Sbjct: 3460479 ccgcgacggcgacggcgggcag 3460500
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgctatcggccccggcgacgcc 31 |||||||||||||||||||||| Sbjct: 2055291 cgctatcggccccggcgacgcc 2055312
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 tcggccccggcgacgccgccg 35 ||||||||||||||||||||| Sbjct: 211878 tcggccccggcgacgccgccg 211898
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 aggccctcacgcgagccctcgcggt 217 |||||| |||||||||||||||||| Sbjct: 36252 aggcccgcacgcgagccctcgcggt 36276
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 14 atcggccccggcgacgccgccgcc-ggagggag 45 ||||||| |||||||||||||||| |||||||| Sbjct: 23428404 atcggccacggcgacgccgccgcctggagggag 23428372
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 14 atcggccccggcgacgccgccgcc-ggagggag 45 ||||||| |||||||||||||||| |||||||| Sbjct: 23356595 atcggccacggcgacgccgccgcctggagggag 23356563
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 42.1 bits (21), Expect = 1.6 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 14 atcggccccggcgacgccgccgcc-ggagggag 45 ||||||| |||||||||||||||| |||||||| Sbjct: 73755 atcggccacggcgacgccgccgcctggagggag 73787
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcggccccggcgacgccgcc 34 |||||||||||||||||||| Sbjct: 3099364 tcggccccggcgacgccgcc 3099345
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gcgacggcgacggcgggcag 194 |||||||||||||||||||| Sbjct: 11236 gcgacggcgacggcgggcag 11255
>ref|XM_481322.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ctccgcgacggcgacggcgg 190 |||||||||||||||||||| Sbjct: 645 ctccgcgacggcgacggcgg 626
>ref|XM_473848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 669 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 ccgccctccgcgacggcgacggcg 189 ||||||||||| |||||||||||| Sbjct: 53 ccgccctccgccacggcgacggcg 30
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ggatgggagagggcctggcg 116 |||||||||||||||||||| Sbjct: 711945 ggatgggagagggcctggcg 711964
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04 map S1466, complete sequence Length = 140012 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 ggagggaggagggcggctggtggcggag 65 ||||||||||||| ||||||||| |||| Sbjct: 19840 ggagggaggagggaggctggtgggggag 19813
>gb|BC038364.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, transcript variant a, mRNA (cDNA clone MGC:36649 IMAGE:5362605), complete cds Length = 2621 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 93 cgccgccgccggggggaggagggc 116
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cggcgacggcgggcaggccc 198 |||||||||||||||||||| Sbjct: 2190750 cggcgacggcgggcaggccc 2190731
>gb|BC081878.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3, mRNA (cDNA clone MGC:93744 IMAGE:7108128), complete cds Length = 2608 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 72 cgccgccgccggggggaggagggc 95
>gb|BC062198.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, mRNA (cDNA clone MGC:70225 IMAGE:2655879), complete cds Length = 1781 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 102 cgccgccgccggggggaggagggc 125
>gb|BC064824.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, transcript variant a, mRNA (cDNA clone MGC:70231 IMAGE:6477672), complete cds Length = 2145 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 76 cgccgccgccggggggaggagggc 99
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cggcgacggcgggcaggccc 198 |||||||||||||||||||| Sbjct: 3364234 cggcgacggcgggcaggccc 3364215
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aggaaagcgcttgatgcagg 294 |||||||||||||||||||| Sbjct: 5424371 aggaaagcgcttgatgcagg 5424352
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcggccccggcgacgccgcc 34 |||||||||||||||||||| Sbjct: 65461 tcggccccggcgacgccgcc 65442
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 ggagggaggagggcggctggtggcggag 65 ||||||||||||| ||||||||| |||| Sbjct: 22749909 ggagggaggagggaggctggtgggggag 22749882
>ref|XM_857035.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 14 (LOC608074), mRNA Length = 4029 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_857010.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 13 (LOC608074), mRNA Length = 4023 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856983.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 12 (LOC608074), mRNA Length = 3900 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856890.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 9 (LOC608074), mRNA Length = 3918 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856861.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 8 (LOC608074), mRNA Length = 3846 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_845551.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 3 (LOC608074), mRNA Length = 3921 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856815.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 7 (LOC608074), mRNA Length = 4187 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856787.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 6 (LOC608074), mRNA Length = 4154 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856758.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 5 (LOC608074), mRNA Length = 641 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_543761.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 2 (LOC608074), mRNA Length = 1332 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_856701.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 4 (LOC608074), mRNA Length = 4062 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 122 cgccgccgccggggggaggagggc 145
>ref|XM_977102.1| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3 (LOC545592), mRNA Length = 1355 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 105 cgccgccgccggggggaggagggc 128
>ref|XM_906532.2| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 1 (LOC631711), mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 52 cgccgccgccggggggaggagggc 75
>ref|XM_897632.2| PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 12 (LOC545592), mRNA Length = 2522 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 114 cgccgccgccggggggaggagggc 137
>ref|XM_984956.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), mRNA Length = 1847 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 109 cgccgccgccggggggaggagggc 132
>gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence, complete sequence Length = 124170 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 ggagggaggagggcggctggtggcggag 65 ||||||||||||| ||||||||| |||| Sbjct: 87573 ggagggaggagggaggctggtgggggag 87546
>gb|AY363226.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3 variant a mRNA, complete cds; alternatively spliced Length = 1166 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 78 cgccgccgccggggggaggagggc 101
>emb|Y17606.1|RNO17606 Rattus norvegicus mRNA for potassium channel, alpha subunit (Kv9.1) Length = 2720 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tcttccgcgcgctcaagctggccc 162 ||||||||| |||||||||||||| Sbjct: 1191 tcttccgcgtgctcaagctggccc 1214
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cggcgacggcgggcaggccc 198 |||||||||||||||||||| Sbjct: 3095520 cggcgacggcgggcaggccc 3095501
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cccggcgacgccgccgccgg 39 |||||||||||||||||||| Sbjct: 122550 cccggcgacgccgccgccgg 122569
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 ccgccctccgcgacggcgacggcg 189 ||||||||||| |||||||||||| Sbjct: 70627 ccgccctccgccacggcgacggcg 70604
>ref|NM_198132.2| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), mRNA Length = 2608 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 72 cgccgccgccggggggaggagggc 95
>emb|AJ811730.1| Myxococcus macrosporus partial gyrB gene for gyrase B, type strain DSM 14697 Length = 1063 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 183 gacggcgggcaggccctcacgcgagccctcgc 214 |||||||| |||||||||||||| | |||||| Sbjct: 595 gacggcggacaggccctcacgcgcgtcctcgc 564
>ref|NM_146130.2| Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), transcript variant b, mRNA Length = 1873 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 80 cgccgccgccggggggaggagggc 103
>ref|NM_198090.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), transcript variant a, mRNA Length = 2621 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 93 cgccgccgccggggggaggagggc 116
>gb|AC092705.3| Homo sapiens chromosome 18, clone RP11-886H22, complete sequence Length = 137416 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 atattgaggaaagcgcttgatgcaggga 296 ||||||||||||||||| |||| ||||| Sbjct: 124459 atattgaggaaagcgctggatgaaggga 124486
>dbj|AK133860.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730458M06 product:Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3), full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 110 cgccgccgccggggggaggagggc 133
>dbj|AK169663.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005C18 product:Heterogeneous nuclear ribonucleoprotein A3 homolog [Homo sapiens], full insert sequence Length = 1872 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 93 cgccgccgccggggggaggagggc 116
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcgcctgctcttccgcgcgc 150 |||||||||||||||||||| Sbjct: 1120883 gcgcctgctcttccgcgcgc 1120864
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 gaccacctcctcgtcgcgcctgct 139 ||||| |||||||||||||||||| Sbjct: 49843 gaccagctcctcgtcgcgcctgct 49820
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 ccgccctccgcgacggcgacggcg 189 ||||||||||| |||||||||||| Sbjct: 30973254 ccgccctccgccacggcgacggcg 30973231
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcggccccggcgacgccgcc 34 |||||||||||||||||||| Sbjct: 14955674 tcggccccggcgacgccgcc 14955655
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ctccgcgacggcgacggcgg 190 |||||||||||||||||||| Sbjct: 11557543 ctccgcgacggcgacggcgg 11557524
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccggcgacgccgccgccgga 40 |||||||||||||||||||| Sbjct: 2871659 ccggcgacgccgccgccgga 2871678
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gccccggcgacgccgccgcc 37 |||||||||||||||||||| Sbjct: 25714689 gccccggcgacgccgccgcc 25714708
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 ggagggaggagggcggctggtggcggag 65 ||||||||||||| ||||||||| |||| Sbjct: 22742938 ggagggaggagggaggctggtgggggag 22742911
>dbj|AB201711.1| Mus musculus hnRNPA3 mRNA for heterogeneous nuclear ribonucleoprotein A3, complete cds Length = 1636 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 91 cgccgccgccggggggaggagggc 114
>ref|NM_053954.1| Rattus norvegicus K+ voltage-gated channel, subfamily S, 1 (Kcns1), mRNA Length = 2720 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 tcttccgcgcgctcaagctggccc 162 ||||||||| |||||||||||||| Sbjct: 1191 tcttccgcgtgctcaagctggccc 1214
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ctccgcgacggcgacggcgg 190 |||||||||||||||||||| Sbjct: 111677 ctccgcgacggcgacggcgg 111658
>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0467G09 Length = 158204 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ctccgcgacggcgacggcgg 190 |||||||||||||||||||| Sbjct: 17814 ctccgcgacggcgacggcgg 17795
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gccccggcgacgccgccgcc 37 |||||||||||||||||||| Sbjct: 138134 gccccggcgacgccgccgcc 138153
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ccggcgacgccgccgccgga 40 |||||||||||||||||||| Sbjct: 41946 ccggcgacgccgccgccgga 41965
>dbj|AK120631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H08, full insert sequence Length = 2073 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 cctccgcgacggcgacggcgggca 193 |||||||| ||||||||||||||| Sbjct: 499 cctccgcggcggcgacggcgggca 476
>gb|BC023908.1| Mus musculus heterogeneous nuclear ribonucleoprotein A3, transcript variant b, mRNA (cDNA clone MGC:36410 IMAGE:5322033), complete cds Length = 1873 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 80 cgccgccgccggggggaggagggc 103
>gb|AY109685.1| Zea mays CL4926_1 mRNA sequence Length = 1162 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cctccgcgacggcgacggcg 189 |||||||||||||||||||| Sbjct: 57 cctccgcgacggcgacggcg 76
>dbj|AB066554.1| Macaca fascicularis mRNA for NAD-dependent methylene tetrahydrofolate dehydrogenase cyclohydrolase, complete cds Length = 2574 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gccggagggaggagggcggc 54 |||||||||||||||||||| Sbjct: 468 gccggagggaggagggcggc 449
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 cggcgacggcgggcaggccc 198 |||||||||||||||||||| Sbjct: 1783712 cggcgacggcgggcaggccc 1783731
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcggccccggcgacgccgcc 34 |||||||||||||||||||| Sbjct: 15037369 tcggccccggcgacgccgcc 15037350
>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete sequence Length = 151967 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cgccgccgccggagggaggagggc 51 |||||||||||| ||||||||||| Sbjct: 10608 cgccgccgccggggggaggagggc 10631 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,710,626 Number of Sequences: 3902068 Number of extensions: 3710626 Number of successful extensions: 90293 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87918 Number of HSP's gapped (non-prelim): 2366 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
