ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet06c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 149 8e-33
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 149 8e-33
4gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 149 8e-33
5gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 54 4e-04
6gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete ... 52 0.001
7ref|XM_785952.1| PREDICTED: Strongylocentrotus purpuratus simila... 52 0.001
8emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 48 0.023
9gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 46 0.091
10gb|AY106208.1| Zea mays PCO085865 mRNA sequence 46 0.091
11gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 44 0.36
12gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, comple... 44 0.36
13ref|XM_470396.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
14ref|XM_416751.1| PREDICTED: Gallus gallus similar to Cystathioni... 42 1.4
15gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 42 1.4
16gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.4
17dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.4
18dbj|AK105971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
19gb|BC074080.1| Danio rerio cDNA clone IMAGE:7036992, partial cds 40 5.6
20ref|XM_586777.2| PREDICTED: Bos taurus similar to Lysophosphatid... 40 5.6
21ref|XM_868004.1| PREDICTED: Bos taurus similar to Lysophosphatid... 40 5.6
22ref|XM_654025.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.6
23emb|CR382289.17| Zebrafish DNA sequence from clone DKEY-161J10 i... 40 5.6
24gb|AC139238.5| Mus musculus BAC clone RP24-403G3 from chromosome... 40 5.6
25ref|XM_681024.1| PREDICTED: Danio rerio similar to methylcrotono... 40 5.6
26ref|XM_703166.1| PREDICTED: Danio rerio similar to methylcrotono... 40 5.6
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
28gb|AF497482.1| Micromonospora echinospora calicheamicin biosynth... 40 5.6
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.6
30gb|AC104521.3| Homo sapiens chromosome 19 clone CTB-157M14, comp... 40 5.6
31dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.6
32dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
33ref|XM_314118.2| Anopheles gambiae str. PEST ENSANGP00000003760 ... 40 5.6
34emb|BX908722.4| Zebrafish DNA sequence from clone CH211-165A16 i... 40 5.6
35emb|BX005105.6| Zebrafish DNA sequence from clone DKEY-37M8 in l... 40 5.6
36gb|AC007292.1|AC007292 Homo sapiens chromosome 19, cosmid R31167... 40 5.6

>dbj|AK071308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K22, full
           insert sequence
          Length = 1746

 Score =  260 bits (131), Expect = 3e-66
 Identities = 197/219 (89%)
 Strand = Plus / Plus

                                                                       
Query: 193 ccggaggacgcggcggaagggcctcgtggaggccgtcggcaacacgcccctcatccgcat 252
           |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 143 ccggcggacgcggcggaagggcctcgtggaggccatcggaaacacgcccctcatccgcat 202

                                                                       
Query: 253 caacagcctctccgacgccaccgggtgcgagattctggggaaggccgaatttctgaaccc 312
           ||||||||||||||||||||| ||||||||||| |||||||||||||| ||  |||| ||
Sbjct: 203 caacagcctctccgacgccacagggtgcgagatcctggggaaggccgagttcttgaatcc 262

                                                                       
Query: 313 gggaggcagcgtgaaggaccgcgtggcggtgaagatcatcgaggaggctctgaaatctgg 372
            |||||||||||||||||||| ||||| || ||||||||||| ||||||||| |||||||
Sbjct: 263 cggaggcagcgtgaaggaccgtgtggcagttaagatcatcgaagaggctctggaatctgg 322

                                                  
Query: 373 gaatcttgtctgtggtggtgtagtaacggaagggagtgc 411
             ||||| |||||||||||  |||||| || ||||||||
Sbjct: 323 tgatcttctctgtggtggtacagtaacagaggggagtgc 361



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 67 gatggcggctgcgacggcggc 87
          |||||||||||||||||||||
Sbjct: 11 gatggcggctgcgacggcggc 31



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  149 bits (75), Expect = 8e-33
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                           
Query: 193     ccggaggacgcggcggaagggcctcgtggaggccgtcggcaacacgcccctcatccgcat 252
               |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 6054062 ccggcggacgcggcggaagggcctcgtggaggccatcggaaacacgcccctcatccgcat 6054121

                                              
Query: 253     caacagcctctccgacgccaccgggtgcgag 283
               ||||||||||||||||||||| |||||||||
Sbjct: 6054122 caacagcctctccgacgccacagggtgcgag 6054152



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                           
Query: 282     agattctggggaaggccgaatttctgaacccgggaggcagcgtgaaggaccgcgtggcgg 341
               |||| |||||||||||||| ||  |||| || |||||||||||||||||||| ||||| |
Sbjct: 6054259 agatcctggggaaggccgagttcttgaatcccggaggcagcgtgaaggaccgtgtggcag 6054318

                                 
Query: 342     tgaagatcatcgaggagg 359
               | ||||||||||| ||||
Sbjct: 6054319 ttaagatcatcgaagagg 6054336



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                      
Query: 357     aggctctgaaatctgggaatcttgtctgtggtggtgtagtaacggaagggagtgc 411
               |||||||| |||||||  ||||| |||||||||||  |||||| || ||||||||
Sbjct: 6055262 aggctctggaatctggtgatcttctctgtggtggtacagtaacagaggggagtgc 6055316



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 325      gaaggaccgcgtggcggtgaagatcatcg 353
                ||||||| |||||| ||||||||||||||
Sbjct: 35221003 gaaggacggcgtggaggtgaagatcatcg 35220975



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 67      gatggcggctgcgacggcggc 87
               |||||||||||||||||||||
Sbjct: 6053930 gatggcggctgcgacggcggc 6053950



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  149 bits (75), Expect = 8e-33
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                           
Query: 193     ccggaggacgcggcggaagggcctcgtggaggccgtcggcaacacgcccctcatccgcat 252
               |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 6053275 ccggcggacgcggcggaagggcctcgtggaggccatcggaaacacgcccctcatccgcat 6053334

                                              
Query: 253     caacagcctctccgacgccaccgggtgcgag 283
               ||||||||||||||||||||| |||||||||
Sbjct: 6053335 caacagcctctccgacgccacagggtgcgag 6053365



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                           
Query: 282     agattctggggaaggccgaatttctgaacccgggaggcagcgtgaaggaccgcgtggcgg 341
               |||| |||||||||||||| ||  |||| || |||||||||||||||||||| ||||| |
Sbjct: 6053472 agatcctggggaaggccgagttcttgaatcccggaggcagcgtgaaggaccgtgtggcag 6053531

                                 
Query: 342     tgaagatcatcgaggagg 359
               | ||||||||||| ||||
Sbjct: 6053532 ttaagatcatcgaagagg 6053549



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                      
Query: 357     aggctctgaaatctgggaatcttgtctgtggtggtgtagtaacggaagggagtgc 411
               |||||||| |||||||  ||||| |||||||||||  |||||| || ||||||||
Sbjct: 6054475 aggctctggaatctggtgatcttctctgtggtggtacagtaacagaggggagtgc 6054529



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 325      gaaggaccgcgtggcggtgaagatcatcg 353
                ||||||| |||||| ||||||||||||||
Sbjct: 35311075 gaaggacggcgtggaggtgaagatcatcg 35311047



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 67      gatggcggctgcgacggcggc 87
               |||||||||||||||||||||
Sbjct: 6053143 gatggcggctgcgacggcggc 6053163



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>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090D11, complete sequence
          Length = 174865

 Score =  149 bits (75), Expect = 8e-33
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                         
Query: 193   ccggaggacgcggcggaagggcctcgtggaggccgtcggcaacacgcccctcatccgcat 252
             |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 47538 ccggcggacgcggcggaagggcctcgtggaggccatcggaaacacgcccctcatccgcat 47597

                                            
Query: 253   caacagcctctccgacgccaccgggtgcgag 283
             ||||||||||||||||||||| |||||||||
Sbjct: 47598 caacagcctctccgacgccacagggtgcgag 47628



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 282   agattctggggaaggccgaatttctgaacccgggaggcagcgtgaaggaccgcgtggcgg 341
             |||| |||||||||||||| ||  |||| || |||||||||||||||||||| ||||| |
Sbjct: 47735 agatcctggggaaggccgagttcttgaatcccggaggcagcgtgaaggaccgtgtggcag 47794

                               
Query: 342   tgaagatcatcgaggagg 359
             | ||||||||||| ||||
Sbjct: 47795 ttaagatcatcgaagagg 47812



 Score = 46.1 bits (23), Expect = 0.091
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 357   aggctctgaaatctgggaatcttgtctgtggtggtgtagtaacggaagggagtgc 411
             |||||||| |||||||  ||||| |||||||||||  |||||| || ||||||||
Sbjct: 48738 aggctctggaatctggtgatcttctctgtggtggtacagtaacagaggggagtgc 48792



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    gatggcggctgcgacggcggc 87
             |||||||||||||||||||||
Sbjct: 47406 gatggcggctgcgacggcggc 47426



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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 230     ggcaacacgcccctcatccgcatcaacagcctctc 264
               |||||||||||| ||||||||||||||| ||||||
Sbjct: 2866317 ggcaacacgcccgtcatccgcatcaacaacctctc 2866351



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>gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete sequence
          Length = 37905

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 228  tcggcaacacgcccctcatccgcatcaacagcct 261
            ||||||||||||||| ||||||||||||| ||||
Sbjct: 6096 tcggcaacacgccccacatccgcatcaaccgcct 6129



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>ref|XM_785952.1| PREDICTED: Strongylocentrotus purpuratus similar to cystathionine
           beta-synthase isoform 1 (LOC586159), partial mRNA
          Length = 238

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 228 tcggcaacacgcccctcatccgcatcaaca 257
           |||| |||||||||||||||||||||||||
Sbjct: 173 tcggaaacacgcccctcatccgcatcaaca 202



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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 272    accgggtgcgagattctggggaaggccgaatttctgaacccggg 315
              ||||| |||||||| || || ||||||||||| |||||||||||
Sbjct: 358671 accggctgcgagatcctcggcaaggccgaattcctgaacccggg 358628



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 308     aacccgggaggcagcgtgaaggaccgc 334
               |||||||| ||||||||||||||||||
Sbjct: 3375376 aacccgggtggcagcgtgaaggaccgc 3375350



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>gb|AY106208.1| Zea mays PCO085865 mRNA sequence
          Length = 1008

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 65 gcgatggcggctgcgacggcggcagga 91
          ||||||||||||||| |||||||||||
Sbjct: 42 gcgatggcggctgcggcggcggcagga 16



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>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete
            cds
          Length = 590284

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 71   gcggctgcgacggcggcaggagcagc 96
            ||||||||| ||||||||||||||||
Sbjct: 1418 gcggctgcggcggcggcaggagcagc 1443



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>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence
          Length = 163926

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 71     gcggctgcgacggcggcaggagcagc 96
              ||||||||| ||||||||||||||||
Sbjct: 120204 gcggctgcggcggcggcaggagcagc 120179



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>ref|XM_470396.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1344

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 325 gaaggaccgcgtggcggtgaagatcatcg 353
           ||||||| |||||| ||||||||||||||
Sbjct: 705 gaaggacggcgtggaggtgaagatcatcg 733



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>ref|XM_416751.1| PREDICTED: Gallus gallus similar to Cystathionine beta-synthase
           (Serine sulfhydrase) (Beta-thionase) (Hemoprotein H-450)
           (LOC418544), mRNA
          Length = 2103

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 314 ggaggcagcgtgaaggaccgc 334
           |||||||||||||||||||||
Sbjct: 466 ggaggcagcgtgaaggaccgc 486



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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 325   gaaggaccgcgtggcggtgaagatcatcg 353
             ||||||| |||||| ||||||||||||||
Sbjct: 99764 gaaggacggcgtggaggtgaagatcatcg 99736



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 335    gtggcggtgaagatcatcgag 355
              |||||||||||||||||||||
Sbjct: 398801 gtggcggtgaagatcatcgag 398821



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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 67      gatggcggctgcgacggcggc 87
               |||||||||||||||||||||
Sbjct: 1349558 gatggcggctgcgacggcggc 1349538



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>dbj|AK105971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F02, full
           insert sequence
          Length = 1344

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 325 gaaggaccgcgtggcggtgaagatcatcg 353
           ||||||| |||||| ||||||||||||||
Sbjct: 705 gaaggacggcgtggaggtgaagatcatcg 733



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>gb|BC074080.1| Danio rerio cDNA clone IMAGE:7036992, partial cds
          Length = 2765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  gaagatcatcgaggaggctc 362
            ||||||||||||||||||||
Sbjct: 1015 gaagatcatcgaggaggctc 1034



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>ref|XM_586777.2| PREDICTED: Bos taurus similar to Lysophosphatidic acid receptor Edg-4
            (LPA receptor 2) (LPA-2), transcript variant 1
            (LOC509748), mRNA
          Length = 1657

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 376  tcttgtctgtggtggtgtag 395
            ||||||||||||||||||||
Sbjct: 1392 tcttgtctgtggtggtgtag 1411



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>ref|XM_868004.1| PREDICTED: Bos taurus similar to Lysophosphatidic acid receptor Edg-4
            (LPA receptor 2) (LPA-2), transcript variant 2
            (LOC509748), mRNA
          Length = 1706

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 376  tcttgtctgtggtggtgtag 395
            ||||||||||||||||||||
Sbjct: 1441 tcttgtctgtggtggtgtag 1460



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>ref|XM_654025.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1513.2), mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 263 tccgacgccaccgggtgcgagattctggggaaggccgaatttctgaac 310
           ||||| || ||||||||||| || || | |||||| ||||||||||||
Sbjct: 250 tccgaagcgaccgggtgcgaaatcctagcgaaggctgaatttctgaac 297



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>emb|CR382289.17| Zebrafish DNA sequence from clone DKEY-161J10 in linkage group 10,
              complete sequence
          Length = 187296

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      acagcccaactgaacttctg 27
              ||||||||||||||||||||
Sbjct: 177016 acagcccaactgaacttctg 177035



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>gb|AC139238.5| Mus musculus BAC clone RP24-403G3 from chromosome 12, complete sequence
          Length = 170371

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tctgggaatcttgtctgtgg 387
              ||||||||||||||||||||
Sbjct: 116227 tctgggaatcttgtctgtgg 116208



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>ref|XM_681024.1| PREDICTED: Danio rerio similar to methylcrotonoyl-Coenzyme A
            carboxylase 1 (alpha), transcript variant 1 (LOC559969),
            mRNA
          Length = 2728

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  gaagatcatcgaggaggctc 362
            ||||||||||||||||||||
Sbjct: 1014 gaagatcatcgaggaggctc 1033



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>ref|XM_703166.1| PREDICTED: Danio rerio similar to methylcrotonoyl-Coenzyme A
            carboxylase 1 (alpha), transcript variant 2 (LOC559969),
            mRNA
          Length = 2668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 343  gaagatcatcgaggaggctc 362
            ||||||||||||||||||||
Sbjct: 1014 gaagatcatcgaggaggctc 1033



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 68       atggcggctgcgacggcggc 87
                ||||||||||||||||||||
Sbjct: 10087529 atggcggctgcgacggcggc 10087548



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>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete
             sequence
          Length = 90348

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gaggccgtcggcaacacgcc 240
             ||||||||||||||||||||
Sbjct: 27716 gaggccgtcggcaacacgcc 27697



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 307     gaacccgggaggcagcgtgaaggaccgc 334
               ||||||||  ||||||||||||||||||
Sbjct: 1485846 gaacccggccggcagcgtgaaggaccgc 1485873



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>gb|AC104521.3| Homo sapiens chromosome 19 clone CTB-157M14, complete sequence
          Length = 20540

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tctgaacccgggaggcagcg 323
             ||||||||||||||||||||
Sbjct: 16267 tctgaacccgggaggcagcg 16248



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 272    accgggtgcgagattctggggaaggccgaatt 303
              ||||| |||||||| ||||| |||||||||||
Sbjct: 249672 accggctgcgagatcctgggcaaggccgaatt 249703



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>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002J01
          Length = 130152

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    atggcggctgcgacggcggc 87
             ||||||||||||||||||||
Sbjct: 60205 atggcggctgcgacggcggc 60224



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>ref|XM_314118.2| Anopheles gambiae str. PEST ENSANGP00000003760 (ENSANGG00000003007),
            partial mRNA
          Length = 5601

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  ggcaagagcggctccaagtt 162
            ||||||||||||||||||||
Sbjct: 4891 ggcaagagcggctccaagtt 4910



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>emb|BX908722.4| Zebrafish DNA sequence from clone CH211-165A16 in linkage group 18,
              complete sequence
          Length = 166917

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    cctcgtggaggccgtcggcaacac 237
              |||||| |||||||||||||||||
Sbjct: 127513 cctcgtcgaggccgtcggcaacac 127490



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>emb|BX005105.6| Zebrafish DNA sequence from clone DKEY-37M8 in linkage group 22,
             complete sequence
          Length = 171403

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   gaagatcatcgaggaggctc 362
             ||||||||||||||||||||
Sbjct: 76974 gaagatcatcgaggaggctc 76955



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>gb|AC007292.1|AC007292 Homo sapiens chromosome 19, cosmid R31167, complete sequence
          Length = 39670

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  tctgaacccgggaggcagcg 323
            ||||||||||||||||||||
Sbjct: 2300 tctgaacccgggaggcagcg 2281


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,144,871
Number of Sequences: 3902068
Number of extensions: 3144871
Number of successful extensions: 206272
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 205563
Number of HSP's gapped (non-prelim): 709
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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