>MOT1_SCHPO (O43065) Probable helicase mot1 (EC 3.6.1.-) (TBP-associated factor|
            mot1) (Modifier of transcription 1)
          Length = 1953

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 302  AVFTIGPRADDVECLLRYAKLISPHDKLSHHVNELVKGVIE 424
            +++ I     D++C    A  +  +DKL   +N ++KG++E
Sbjct: 965  SIYKIAKERQDIQCSASIASAMVTYDKLPKKLNSIIKGIME 1005

>GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC cell-derived|
           growth factor) (PCDGF) [Contains: Acrogranin;
           Granulin-1; Granulin-2; Granulin-3; Granulin-4;
           Granulin-5; Granulin-6; Granulin-7]
          Length = 589

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +2

Query: 239 PVNYTFEVQAMSAEK-LPFVLPAVF-TIGPRADDVEC 343
           P  YT  V+A + EK + F+ P V  T+GP+  +VEC
Sbjct: 481 PAGYTCNVKARTCEKDVDFIQPPVLLTLGPKVGNVEC 517

>SCO2_HUMAN (O43819) SCO2 protein homolog, mitochondrial precursor|
          Length = 266

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 260 VQAMSAEK-LPFVLPAVFTIGPRADDVECLLRYAKLISP 373
           V+ + AE  LP V P   T+ P  DDVE + RY +   P
Sbjct: 148 VRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHP 186

>CNRA_RALME (P37972) Nickel and cobalt resistance protein cnrA|
          Length = 1075

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 356 AKLISPHDKLSHHVNELVKGVIEGETRVLAAS 451
           ++ +  H K+SHHV ++ +  I GE R  AAS
Sbjct: 275 SRAVIAHGKMSHHVGQVARVKIGGELRSGAAS 306

>CR4AA_BACTI (P16480) Pesticidal crystal protein cry4Aa (Insecticidal|
            delta-endotoxin CryIVA(a)) (Crystaline entomocidal
            protoxin) (135 kDa crystal protein)
          Length = 1180

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 181  LHVVHAVPGDGQVLGRARDSVHETHGARQAKESRSQQALD 62
            L V+   P DG+ L R +    + +   +AK S +QQA D
Sbjct: 941  LEVIEEGPIDGEALSRVKHMEKKWNDQMEAKRSETQQAYD 980

>CR4BA_BACTI (P05519) Pesticidal crystal protein cry4Ba (Insecticidal|
            delta-endotoxin CryIVB(a)) (Crystaline entomocidal
            protoxin) (128 kDa crystal protein)
          Length = 1136

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 181  LHVVHAVPGDGQVLGRARDSVHETHGARQAKESRSQQALD 62
            L V+   P DG+ L R +    + +   +AK S +QQA D
Sbjct: 897  LEVIEEGPIDGEALSRVKHMEKKWNDQMEAKRSETQQAYD 936

>POLN_HEVME (Q03495) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA|
           polymerase/Helicase)
          Length = 1691

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 457 GHGGRQHAGLALDHALDQLVDVVGELVVRGDELGVAEQALDV 332
           GH    + G  +D A    +D+ G  +V G  L    QALD+
Sbjct: 496 GHDNEAYEGSDVDTAEPATLDITGSYIVDGRSLQTVYQALDL 537


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,292,036
Number of Sequences: 219361
Number of extensions: 848139
Number of successful extensions: 2877
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2876
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)