>ref|XM_550108.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 962

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 340 ccgacgagccaacacctccgc 360
           |||||||||||||||||||||
Sbjct: 279 ccgacgagccaacacctccgc 259

>gb|AC135104.22| Mus musculus strain C57BL/6J clone rp23-206l6, complete sequence
          Length = 198294

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     gccacagctagtagcaaagca 57
              |||||||||||||||||||||
Sbjct: 121937 gccacagctagtagcaaagca 121957

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 340     ccgacgagccaacacctccgc 360
               |||||||||||||||||||||
Sbjct: 2402665 ccgacgagccaacacctccgc 2402645

>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 340    ccgacgagccaacacctccgc 360
              |||||||||||||||||||||
Sbjct: 131715 ccgacgagccaacacctccgc 131695

>dbj|AK102823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108P10, full
           insert sequence
          Length = 962

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 340 ccgacgagccaacacctccgc 360
           |||||||||||||||||||||
Sbjct: 279 ccgacgagccaacacctccgc 259

>dbj|AK061501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E03, full
           insert sequence
          Length = 986

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 340 ccgacgagccaacacctccgc 360
           |||||||||||||||||||||
Sbjct: 286 ccgacgagccaacacctccgc 266

>emb|AL645684.16| Mouse DNA sequence from clone RP23-35E7 on chromosome 11, complete
             sequence
          Length = 122461

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    gccacagctagtagcaaagca 57
             |||||||||||||||||||||
Sbjct: 17518 gccacagctagtagcaaagca 17498

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      aagcagctggagtccccgga 72
               ||||||||||||||||||||
Sbjct: 1403895 aagcagctggagtccccgga 1403876

>ref|XM_366379.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG10597.4) partial mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 gccacgcgtgctgccgacga 346
           ||||||||||||||||||||
Sbjct: 918 gccacgcgtgctgccgacga 899

>emb|AJ249450.1|SCO249450 Streptomyces coelicolor A3(2) sigH gene encoding an RNA polymerase
            sigma factor and adjacent genes
          Length = 2680

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cggcggacggcatcgacggc 217
            ||||||||||||||||||||
Sbjct: 1423 cggcggacggcatcgacggc 1442

>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   cggcggacggcatcgacggc 217
             ||||||||||||||||||||
Sbjct: 24048 cggcggacggcatcgacggc 24029

>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9, complete
              sequence
          Length = 178929

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    gagacagtgctaccatgttc 286
              ||||||||||||||||||||
Sbjct: 137790 gagacagtgctaccatgttc 137809

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 198     cggcggacggcatcgacggc 217
               ||||||||||||||||||||
Sbjct: 3768467 cggcggacggcatcgacggc 3768486

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 109     catcaccgtcgtggtcgacaacgctttc 136
               |||||||  |||||||||||||||||||
Sbjct: 1703351 catcaccaccgtggtcgacaacgctttc 1703324

>gb|AF162936.2|AF162936 Streptomyces coelicolor A3(2) Na/H antiporter homolog gene, partial
            cds; and hypothetical protein (ushY), putative sigma
            factor SigH anti-sigma factor (ushX), and RNA polymerase
            alternative sigma factor (sigH) genes, complete cds
          Length = 3300

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cggcggacggcatcgacggc 217
            ||||||||||||||||||||
Sbjct: 1713 cggcggacggcatcgacggc 1732

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 70      ggactgcaaccggccagccatcgacggc 97
               ||||||||||| ||||| ||||||||||
Sbjct: 2583667 ggactgcaacctgccaggcatcgacggc 2583640

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    atcaccgtcgtggtcgacaa 129
              ||||||||||||||||||||
Sbjct: 938420 atcaccgtcgtggtcgacaa 938439


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,307,709
Number of Sequences: 3902068
Number of extensions: 2307709
Number of successful extensions: 37095
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36839
Number of HSP's gapped (non-prelim): 256
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)