ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet04h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474682.1| Oryza sativa (japonica cultivar-group), predic... 82 4e-13
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 82 4e-13
3dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 4e-13
4emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 82 4e-13
5emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 82 4e-13
6gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.092
7gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.4
8gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.4
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
10gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 1.4
11emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 1.4
12gb|AY676165.1| Haloferax volcanii FolC-P protein gene, complete cds 38 5.7
13ref|XM_466497.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.7
14ref|XM_465811.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.7
15ref|NM_193243.1| Oryza sativa (japonica cultivar-group), predic... 38 5.7
16gb|BT018347.1| Zea mays clone EL01T0403E02.c mRNA sequence 38 5.7
17gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 38 5.7
18gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 5.7
19gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 5.7
20ref|XM_499803.1| Yarrowia lipolytica CLIB122, YALI0A06171g predi... 38 5.7
21gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 38 5.7
22emb|X71659.1|RSBLNBAA R.sphaeroides genes glnA and glnB 38 5.7
23emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 38 5.7
24emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 5.7
25emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 5.7
26gb|AE012398.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 5.7
27gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 5.7
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
30dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
31gb|AF135592.1|AF135592 Chlamydomonas reinhardtii putative ferred... 38 5.7
32dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 5.7
33dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
34dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
35dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
36gb|U80953.1| Caenorhabditis elegans cosmid B0412, complete sequence 38 5.7
37gb|AF087002.1|AF087002 Burkholderia pseudomallei cytochrome c ox... 38 5.7
38dbj|AB027293.1| Nilaparvata lugens yeast-like symbiont gene for ... 38 5.7
39gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 5.7
40gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 5.7
41emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 38 5.7
42gb|AD000013.1|MSGY219 Mycobacterium tuberculosis sequence from c... 38 5.7
43gb|DQ147214.1| Zea diploperennis isolate d8 phospholipid transfe... 38 5.7
44gb|DQ147213.1| Zea diploperennis isolate d7B phospholipid transf... 38 5.7
45gb|DQ147212.1| Zea diploperennis isolate d6 phospholipid transfe... 38 5.7
46gb|DQ147211.1| Zea diploperennis isolate d5 phospholipid transfe... 38 5.7
47gb|DQ147210.1| Zea diploperennis isolate d4 phospholipid transfe... 38 5.7
48gb|DQ147209.1| Zea diploperennis isolate d4a phospholipid transf... 38 5.7
49gb|DQ147208.1| Zea diploperennis isolate d3 phospholipid transfe... 38 5.7
50gb|DQ147207.1| Zea diploperennis isolate d2 phospholipid transfe... 38 5.7
51gb|DQ147206.1| Zea diploperennis isolate d1 phospholipid transfe... 38 5.7
52gb|DQ147205.1| Zea mays subsp. parviglumis isolate p15 phospholi... 38 5.7
53gb|DQ147204.1| Zea mays subsp. parviglumis isolate p13 phospholi... 38 5.7
54gb|DQ147203.1| Zea mays subsp. parviglumis isolate p12 phospholi... 38 5.7
55gb|DQ147202.1| Zea mays subsp. parviglumis isolate p11 phospholi... 38 5.7
56gb|DQ147201.1| Zea mays subsp. parviglumis isolate p11a phosphol... 38 5.7
57gb|DQ147200.1| Zea mays subsp. parviglumis isolate p9 phospholip... 38 5.7
58gb|DQ147199.1| Zea mays subsp. parviglumis isolate p8 phospholip... 38 5.7
59gb|DQ147198.1| Zea mays subsp. parviglumis isolate p6 phospholip... 38 5.7
60gb|DQ147197.1| Zea mays subsp. parviglumis isolate p5 phospholip... 38 5.7
61gb|DQ147196.1| Zea mays subsp. parviglumis isolate p4 phospholip... 38 5.7
62gb|DQ147195.1| Zea mays subsp. parviglumis isolate p3 phospholip... 38 5.7
63gb|DQ147194.1| Zea mays subsp. parviglumis isolate p2 phospholip... 38 5.7
64gb|DQ147193.1| Zea mays subsp. parviglumis isolate p1 phospholip... 38 5.7
65gb|M57249.1|MZEPLTPA Maize phospholipid transfer protein mRNA, 3... 38 5.7
66gb|J04176.1|MZEPLTP Maize phospholipid transfer protein mRNA, co... 38 5.7
67dbj|AB038705.1| Glyphinaphis bambusae yeast-like symbiont pseudo... 38 5.7
68dbj|AB038704.1| Tuberaphis takenouchii yeast-like symbiont pseud... 38 5.7
69dbj|AB038703.1| Tuberaphis taiwana yeast-like symbiont pseudogen... 38 5.7
70dbj|AB038702.1| Tuberaphis styraci yeast-like symbiont pseudogen... 38 5.7
71dbj|AB038701.1| Geisha distinctissima yeast-like symbiont gene f... 38 5.7
72dbj|AB038700.1| Ricania japonica yeast-like symbiont gene for ur... 38 5.7
73dbj|AB066297.1| Pseudomonas putida kdgA, kdgB genes for 2-oxoglu... 38 5.7 
>ref|XM_474682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1128

 Score = 81.8 bits (41), Expect = 4e-13
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                       
Query: 55  tacgaccgcacggccgacctccgcgcgctggacgccaccttcgccggcgtcagcggcctc 114
           ||||||||||| ||||| ||||||||||| ||||||||| || |||||||| ||||||||
Sbjct: 43  tacgaccgcaccgccgagctccgcgcgctcgacgccaccctctccggcgtccgcggcctc 102

                
Query: 115 gtcgc 119
           |||||
Sbjct: 103 gtcgc 107
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 81.8 bits (41), Expect = 4e-13
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                           
Query: 55      tacgaccgcacggccgacctccgcgcgctggacgccaccttcgccggcgtcagcggcctc 114
               ||||||||||| ||||| ||||||||||| ||||||||| || |||||||| ||||||||
Sbjct: 5555306 tacgaccgcaccgccgagctccgcgcgctcgacgccaccctctccggcgtccgcggcctc 5555365

                    
Query: 115     gtcgc 119
               |||||
Sbjct: 5555366 gtcgc 5555370



 Score = 40.1 bits (20), Expect = 1.4
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                               
Query: 75      ccgcgcgctggacgccaccttcgccggcgtcagcggcctcgtcgcctc 122
               |||||||||  ||||||||||  |||| |||  |||||||||||||||
Sbjct: 5525547 ccgcgcgctcaacgccaccttgtccggagtccacggcctcgtcgcctc 5525594
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>dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E20, full
           insert sequence
          Length = 1387

 Score = 81.8 bits (41), Expect = 4e-13
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                       
Query: 55  tacgaccgcacggccgacctccgcgcgctggacgccaccttcgccggcgtcagcggcctc 114
           ||||||||||| ||||| ||||||||||| ||||||||| || |||||||| ||||||||
Sbjct: 53  tacgaccgcaccgccgagctccgcgcgctcgacgccaccctctccggcgtccgcggcctc 112

                
Query: 115 gtcgc 119
           |||||
Sbjct: 113 gtcgc 117
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>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
             complete sequence
          Length = 162227

 Score = 81.8 bits (41), Expect = 4e-13
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                         
Query: 55    tacgaccgcacggccgacctccgcgcgctggacgccaccttcgccggcgtcagcggcctc 114
             ||||||||||| ||||| ||||||||||| ||||||||| || |||||||| ||||||||
Sbjct: 12513 tacgaccgcaccgccgagctccgcgcgctcgacgccaccctctccggcgtccgcggcctc 12572

                  
Query: 115   gtcgc 119
             |||||
Sbjct: 12573 gtcgc 12577
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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
              complete sequence
          Length = 150283

 Score = 81.8 bits (41), Expect = 4e-13
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                          
Query: 55     tacgaccgcacggccgacctccgcgcgctggacgccaccttcgccggcgtcagcggcctc 114
              ||||||||||| ||||| ||||||||||| ||||||||| || |||||||| ||||||||
Sbjct: 109936 tacgaccgcaccgccgagctccgcgcgctcgacgccaccctctccggcgtccgcggcctc 109995

                   
Query: 115    gtcgc 119
              |||||
Sbjct: 109996 gtcgc 110000



 Score = 40.1 bits (20), Expect = 1.4
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 75    ccgcgcgctggacgccaccttcgccggcgtcagcggcctcgtcgcctc 122
             |||||||||  ||||||||||  |||| |||  |||||||||||||||
Sbjct: 80177 ccgcgcgctcaacgccaccttgtccggagtccacggcctcgtcgcctc 80224
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.092
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 79      gcgctggacgccaccttcgccggcgtcagc 108
               |||||||| ||||||||||||| |||||||
Sbjct: 2254129 gcgctggaggccaccttcgccgccgtcagc 2254158



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      gacgccaccttcgccggcg 103
               |||||||||||||||||||
Sbjct: 4686087 gacgccaccttcgccggcg 4686069
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>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01,
             complete sequence
          Length = 151938

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    accatgtcggccgcctcctctccc 48
             ||||| ||||||||||||||||||
Sbjct: 59500 accatctcggccgcctcctctccc 59477
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>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0052F16, complete sequence
          Length = 162082

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 25   accatgtcggccgcctcctctccc 48
            ||||| ||||||||||||||||||
Sbjct: 3496 accatctcggccgcctcctctccc 3473
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 25       accatgtcggccgcctcctctccc 48
                ||||| ||||||||||||||||||
Sbjct: 16212143 accatctcggccgcctcctctccc 16212120
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    cgtcagcggcctcgtcgcct 121
              ||||||||||||||||||||
Sbjct: 824081 cgtcagcggcctcgtcgcct 824100
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      gccggcgtcagcggcctcgt 116
               ||||||||||||||||||||
Sbjct: 2289077 gccggcgtcagcggcctcgt 2289096
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>gb|AY676165.1| Haloferax volcanii FolC-P protein gene, complete cds
          Length = 2517

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 93   cttcgccggcgtcagcggcctcg 115
            |||||||||||||||| ||||||
Sbjct: 1639 cttcgccggcgtcagccgcctcg 1617
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>ref|XM_466497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 738

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 87  cgccaccttcgccggcgtc 105
           |||||||||||||||||||
Sbjct: 230 cgccaccttcgccggcgtc 212
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>ref|XM_465811.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 357

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 30  gtcggccgcctcctctccc 48
           |||||||||||||||||||
Sbjct: 314 gtcggccgcctcctctccc 332
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>ref|NM_193243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1191

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 96  cgccggcgtcagcggcctcgtcg 118
           |||||||||| ||||||||||||
Sbjct: 66  cgccggcgtccgcggcctcgtcg 88
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>gb|BT018347.1| Zea mays clone EL01T0403E02.c mRNA sequence
          Length = 827

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 336 cgccggcgtcagcggcctc 354
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 88      gccaccttcgccggcgtca 106
               |||||||||||||||||||
Sbjct: 1860511 gccaccttcgccggcgtca 1860493
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    cgccaccttcgccggcgtc 105
             |||||||||||||||||||
Sbjct: 38144 cgccaccttcgccggcgtc 38162
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 73      ctccgcgcgctggacgcca 91
               |||||||||||||||||||
Sbjct: 1566539 ctccgcgcgctggacgcca 1566521
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>ref|XM_499803.1| Yarrowia lipolytica CLIB122, YALI0A06171g predicted mRNA
          Length = 1188

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 11  cccacgcactaccaaccat 29
           |||||||||||||||||||
Sbjct: 187 cccacgcactaccaaccat 205
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 82     ctggacgccaccttcgccggcgt 104
              ||||||| |||||||||||||||
Sbjct: 115782 ctggacggcaccttcgccggcgt 115804
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>emb|X71659.1|RSBLNBAA R.sphaeroides genes glnA and glnB
          Length = 2460

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 88   gccaccttcgccggcgtca 106
            |||||||||||||||||||
Sbjct: 1438 gccaccttcgccggcgtca 1420
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>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    cgccaccttcgccggcgtc 105
             |||||||||||||||||||
Sbjct: 38200 cgccaccttcgccggcgtc 38218
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 73      ctccgcgcgctggacgcca 91
               |||||||||||||||||||
Sbjct: 1453639 ctccgcgcgctggacgcca 1453621
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             1/14
          Length = 343050

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    cgccaccttcgccggcgtc 105
             |||||||||||||||||||
Sbjct: 38184 cgccaccttcgccggcgtc 38202
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>gb|AE012398.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 306
            of 460 of the complete genome
          Length = 12732

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 78   cgcgctggacgccaccttcgccg 100
            |||||||| ||||||||||||||
Sbjct: 5018 cgcgctggtcgccaccttcgccg 5040
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 78      cgcgctggacgccaccttcgccg 100
               |||||||| ||||||||||||||
Sbjct: 1538732 cgcgctggtcgccaccttcgccg 1538710
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 87       cgccaccttcgccggcgtc 105
                |||||||||||||||||||
Sbjct: 22974002 cgccaccttcgccggcgtc 22974020



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 35       ccgcctcctctcccgtcgc 53
                |||||||||||||||||||
Sbjct: 20907952 ccgcctcctctcccgtcgc 20907970



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 30       gtcggccgcctcctctccc 48
                |||||||||||||||||||
Sbjct: 17616534 gtcggccgcctcctctccc 17616552
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 96       cgccggcgtcagcggcctcgtcg 118
                |||||||||| ||||||||||||
Sbjct: 19504412 cgccggcgtccgcggcctcgtcg 19504390
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>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0086A10
          Length = 151071

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 96     cgccggcgtcagcggcctcgtcg 118
              |||||||||| ||||||||||||
Sbjct: 113228 cgccggcgtccgcggcctcgtcg 113206
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>gb|AF135592.1|AF135592 Chlamydomonas reinhardtii putative ferredoxin-dependent glutamate
            synthase precursor (CRFG3) mRNA, partial cds; nuclear
            gene for chloroplast product
          Length = 3217

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 89   ccaccttcgccggcgtcagcggc 111
            ||||||||||||||| |||||||
Sbjct: 1664 ccaccttcgccggcgccagcggc 1686
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                              
Query: 81      gctggacgccaccttcgccggcgtcagcggc 111
               ||||||||||| | ||||||||| |||||||
Sbjct: 3079360 gctggacgccatcctcgccggcgccagcggc 3079330
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0016G10
          Length = 143211

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    cgccaccttcgccggcgtc 105
             |||||||||||||||||||
Sbjct: 93804 cgccaccttcgccggcgtc 93822
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    ccgcctcctctcccgtcgc 53
             |||||||||||||||||||
Sbjct: 31424 ccgcctcctctcccgtcgc 31442
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>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_D09
          Length = 124026

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    gtcggccgcctcctctccc 48
             |||||||||||||||||||
Sbjct: 86452 gtcggccgcctcctctccc 86470
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>gb|U80953.1| Caenorhabditis elegans cosmid B0412, complete sequence
          Length = 33975

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 2     actaggacacccacgcactacca 24
             |||||||||||||||||| ||||
Sbjct: 18450 actaggacacccacgcaccacca 18472
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>gb|AF087002.1|AF087002 Burkholderia pseudomallei cytochrome c oxidase subunit 1 gene,
          complete cds
          Length = 2002

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 73 ctccgcgcgctggacgcca 91
          |||||||||||||||||||
Sbjct: 26 ctccgcgcgctggacgcca 8
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>dbj|AB027293.1| Nilaparvata lugens yeast-like symbiont gene for uricase, complete
          cds
          Length = 2000

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 53 aggacacccacgcactacc 71
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 93      cttcgccggcgtcagcggc 111
               |||||||||||||||||||
Sbjct: 4732447 cttcgccggcgtcagcggc 4732465
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 73      ctccgcgcgctggacgcca 91
               |||||||||||||||||||
Sbjct: 3309960 ctccgcgcgctggacgcca 3309978
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     cccacgcactaccaaccat 29
              |||||||||||||||||||
Sbjct: 607662 cccacgcactaccaaccat 607644
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>gb|AD000013.1|MSGY219 Mycobacterium tuberculosis sequence from clone y219
          Length = 38721

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    cgccaccttcgccggcgtc 105
             |||||||||||||||||||
Sbjct: 23512 cgccaccttcgccggcgtc 23494
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>gb|DQ147214.1| Zea diploperennis isolate d8 phospholipid transfer protein 1 (plt1)
           gene, complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 335 cgccggcgtcagcggcctc 353
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>gb|DQ147213.1| Zea diploperennis isolate d7B phospholipid transfer protein 1
           (plt1) gene, partial cds
          Length = 698

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 235 cgccggcgtcagcggcctc 253
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>gb|DQ147212.1| Zea diploperennis isolate d6 phospholipid transfer protein 1 (plt1)
           gene, complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 335 cgccggcgtcagcggcctc 353
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>gb|DQ147211.1| Zea diploperennis isolate d5 phospholipid transfer protein 1 (plt1)
           gene, complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 335 cgccggcgtcagcggcctc 353
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>gb|DQ147210.1| Zea diploperennis isolate d4 phospholipid transfer protein 1 (plt1)
           gene, partial cds
          Length = 514

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 227 cgccggcgtcagcggcctc 245
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>gb|DQ147209.1| Zea diploperennis isolate d4a phospholipid transfer protein 1
           (plt1) gene, partial cds
          Length = 514

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 227 cgccggcgtcagcggcctc 245
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>gb|DQ147208.1| Zea diploperennis isolate d3 phospholipid transfer protein 1 (plt1)
           gene, complete cds
          Length = 812

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 335 cgccggcgtcagcggcctc 353
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>gb|DQ147207.1| Zea diploperennis isolate d2 phospholipid transfer protein 1 (plt1)
           gene, partial cds
          Length = 699

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 220 cgccggcgtcagcggcctc 238
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>gb|DQ147206.1| Zea diploperennis isolate d1 phospholipid transfer protein 1 (plt1)
           gene, complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 335 cgccggcgtcagcggcctc 353
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>gb|DQ147205.1| Zea mays subsp. parviglumis isolate p15 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 804

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 336 cgccggcgtcagcggcctc 354
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>gb|DQ147204.1| Zea mays subsp. parviglumis isolate p13 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 780

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 318 cgccggcgtcagcggcctc 336
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>gb|DQ147203.1| Zea mays subsp. parviglumis isolate p12 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 714

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 243 cgccggcgtcagcggcctc 261
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>gb|DQ147202.1| Zea mays subsp. parviglumis isolate p11 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 648

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 342 cgccggcgtcagcggcctc 360
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>gb|DQ147201.1| Zea mays subsp. parviglumis isolate p11a phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 829

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 355 cgccggcgtcagcggcctc 373
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>gb|DQ147200.1| Zea mays subsp. parviglumis isolate p9 phospholipid transfer
           protein 1 (plt1) gene, partial cds
          Length = 709

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 221 cgccggcgtcagcggcctc 239
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>gb|DQ147199.1| Zea mays subsp. parviglumis isolate p8 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 831

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 357 cgccggcgtcagcggcctc 375
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>gb|DQ147198.1| Zea mays subsp. parviglumis isolate p6 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 821

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 352 cgccggcgtcagcggcctc 370
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>gb|DQ147197.1| Zea mays subsp. parviglumis isolate p5 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 832

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 355 cgccggcgtcagcggcctc 373
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>gb|DQ147196.1| Zea mays subsp. parviglumis isolate p4 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 835

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 352 cgccggcgtcagcggcctc 370
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>gb|DQ147195.1| Zea mays subsp. parviglumis isolate p3 phospholipid transfer
           protein 1 (plt1) gene, partial cds
          Length = 686

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 222 cgccggcgtcagcggcctc 240
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>gb|DQ147194.1| Zea mays subsp. parviglumis isolate p2 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 352 cgccggcgtcagcggcctc 370
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>gb|DQ147193.1| Zea mays subsp. parviglumis isolate p1 phospholipid transfer
           protein 1 (plt1) gene, complete cds
          Length = 831

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 353 cgccggcgtcagcggcctc 371
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>gb|M57249.1|MZEPLTPA Maize phospholipid transfer protein mRNA, 3' end
          Length = 677

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 166 cgccggcgtcagcggcctc 184
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>gb|J04176.1|MZEPLTP Maize phospholipid transfer protein mRNA, complete cds. of clone
           9C2
          Length = 813

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  cgccggcgtcagcggcctc 114
           |||||||||||||||||||
Sbjct: 353 cgccggcgtcagcggcctc 371
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>dbj|AB038705.1| Glyphinaphis bambusae yeast-like symbiont pseudogene for uricase
          Length = 1878

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 20 aggacacccacgcactacc 38
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>dbj|AB038704.1| Tuberaphis takenouchii yeast-like symbiont pseudogene for uricase
          Length = 1160

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 19 aggacacccacgcactacc 37
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>dbj|AB038703.1| Tuberaphis taiwana yeast-like symbiont pseudogene for uricase
          Length = 1613

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 20 aggacacccacgcactacc 38
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>dbj|AB038702.1| Tuberaphis styraci yeast-like symbiont pseudogene for uricase
          Length = 1593

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 20 aggacacccacgcactacc 38
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>dbj|AB038701.1| Geisha distinctissima yeast-like symbiont gene for uricase,
          complete cds
          Length = 1926

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 20 aggacacccacgcactacc 38
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>dbj|AB038700.1| Ricania japonica yeast-like symbiont gene for uricase, complete
          cds
          Length = 1924

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 5  aggacacccacgcactacc 23
          |||||||||||||||||||
Sbjct: 20 aggacacccacgcactacc 38
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>dbj|AB066297.1| Pseudomonas putida kdgA, kdgB genes for 2-oxoglutarate dehydrogenase,
            dihydrolipoamide succinyltransferase, partial cds
          Length = 3183

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 93   cttcgccggcgtcagcggc 111
            |||||||||||||||||||
Sbjct: 3106 cttcgccggcgtcagcggc 3088


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 588,139
Number of Sequences: 3902068
Number of extensions: 588139
Number of successful extensions: 47092
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45465
Number of HSP's gapped (non-prelim): 1627
length of query: 123
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 102
effective length of database: 17,151,101,840
effective search space: 1749412387680
effective search space used: 1749412387680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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