ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet04g01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ003141.1|HVAJ3141 Hordeum vulgare mRNA for stress-related peroxidase Length = 1245 Score = 599 bits (302), Expect = e-168 Identities = 314/318 (98%) Strand = Plus / Plus Query: 146 caagccacacgaccctccctcagtcctaagtagctacctagctaggtccaggtgcaagaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 caagccacacgaccctccctcagtcctaagtagctacctagctaggtccaggtgcaagaa 75 Query: 206 gaagctcagcttcagcaatggcgtccagagcagcagcggccatcgccgtcctggccttgg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 gaagctcagcttcagcaatggcgtccagagcagcagcggccatcgccgtcctggccttgg 135 Query: 266 tctgcgccgccgtccactcgtcggagggccagctgtcaccaaacttccacgccgccacgt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 tctgcgccgccgtccactcgtcggagggccagctgtcaccaaacttccacgccgccacgt 195 Query: 326 gcccggacctggagcgcatcgtggagttccacgtcgccgagacgttccggcgcgacgtgg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gcccggacctggagcgcatcgtggagttccacgtcgccgagacgttccggcgcgacgtgg 255 Query: 386 gcgtggcgccggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgacg 445 |||||| ||||||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 256 gcgtggtgccggcgctcatccgcatcctcttccacgactgtttcccgcaggggtgtgacg 315 Query: 446 cctccgtgctgctcaagg 463 |||||||||||||||||| Sbjct: 316 cctccgtgctgctcaagg 333 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ggcttgcggtggatacctagg 33 ||||||||||||||||||||| Sbjct: 21 ggcttgcggtggatacctagg 1
>emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor (prx gene), cultivar Cheyenne Length = 1226 Score = 458 bits (231), Expect = e-126 Identities = 252/259 (97%) Strand = Plus / Plus Query: 205 agaagctcagcttcagcaatggcgtccagagcagcagcggccatcgccgtcctggccttg 264 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 agaagctcagcttcagcgatggcgtccagagcagcagcggccatcgccgtcctggccttg 121 Query: 265 gtctgcgccgccgtccactcgtcggagggccagctgtcaccaaacttccacgccgccacg 324 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 122 gtctgcgccgccgtccactcgtcggagggccagctctcacccaacttccacgccgcgacg 181 Query: 325 tgcccggacctggagcgcatcgtggagttccacgtcgccgagacgttccggcgcgacgtg 384 |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 182 tgcccggacctggagcacatcgtggagttccacgtcgccgagacgttccgccgcgacgtg 241 Query: 385 ggcgtggcgccggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 ggcgtggcgccggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgac 301 Query: 445 gcctccgtgctgctcaagg 463 || |||||||||||||||| Sbjct: 302 gcgtccgtgctgctcaagg 320
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 289 bits (146), Expect = 4e-75 Identities = 146/146 (100%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120069 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 120010 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120009 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119950 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||||||||||||||||||||| Sbjct: 119949 caaccttttaaactgcctgctgaatc 119924 Score = 289 bits (146), Expect = 4e-75 Identities = 146/146 (100%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94825 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 94884 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94885 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 94944 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||||||||||||||||||||| Sbjct: 94945 caaccttttaaactgcctgctgaatc 94970
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75709 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 75650 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75649 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 75590 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 75589 caaccttttgaactgcctgctgaatc 75564
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 921 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 920 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 861 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 860 caaccttttgaactgcctgctgaatc 835
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381829 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 381888 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381889 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 381948 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 381949 caaccttttgaactgcctgctgaatc 381974
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113800 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 113741 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113740 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 113681 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 113680 caaccttttgaactgcctgctgaatc 113655
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368482 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 368423 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368422 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 368363 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 368362 caaccttttgaactgcctgctgaatc 368337 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185087 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 185028 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185027 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 184968 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 184967 caaccttttgaactgcctgctgaatc 184942
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44894 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 44835 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44834 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 44775 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 44774 caaccttttgaactgcctgctgaatc 44749 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20224 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 20283 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20284 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 20343 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 20344 caaccttttgaactgcctgctgaatc 20369
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1523 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 1464 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1463 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 1404 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 1403 caaccttttgaactgcctgctgaatc 1378
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123733 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 123674 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123673 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 123614 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 123613 caaccttttgaactgcctgctgaatc 123588 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99104 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 99163 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99164 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 99223 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 99224 caaccttttgaactgcctgctgaatc 99249
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124450 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 124391 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124390 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 124331 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 124330 caaccttttgaactgcctgctgaatc 124305 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99781 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 99840 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99841 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 99900 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 99901 caaccttttgaactgcctgctgaatc 99926
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 281 bits (142), Expect = 1e-72 Identities = 145/146 (99%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75769 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 75828 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75829 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 75888 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||||||||||||||| ||||| Sbjct: 75889 caaccttttaaactgcctgcggaatc 75914
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118850 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 118791 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118790 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 118731 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 118730 caaccttttgaactgcctgctgaatc 118705
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119934 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 119875 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119874 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119815 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 119814 caaccttttgaactgcctgctgaatc 119789 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95222 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 95281 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95282 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95341 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 95342 caaccttttgaactgcctgctgaatc 95367
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119934 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 119875 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119874 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119815 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 119814 caaccttttgaactgcctgctgaatc 119789 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95222 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 95281 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95282 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95341 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 95342 caaccttttgaactgcctgctgaatc 95367
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119883 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 119824 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119823 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119764 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 119763 caaccttttgaactgcctgctgaatc 119738 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95167 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 95226 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95227 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95286 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 95287 caaccttttgaactgcctgctgaatc 95312
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31507800 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 31507859 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507860 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 31507919 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 31507920 caaccttttgaactgcctgctgaatc 31507945 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 390 ggcgccggcgctcatccgcatcctcttccacgactgcttc 429 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 14343236 ggcgccggc-ctcatccgcatgctcttccacgactgcttc 14343274 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 390 ggcgccggcgctcatccgcatcctcttccacgactgcttc 429 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 14333362 ggcgccggc-ctcatccgcatgctcttccacgactgcttc 14333400 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 401 tcatccgcatcctcttccacgactgctt 428 |||||||||| ||||||||||||||||| Sbjct: 14308191 tcatccgcatgctcttccacgactgctt 14308218 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||||| |||||||| ||||||||| Sbjct: 14319087 ctcatccgcatgctcttccatgactgcttc 14319116 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 14283924 ctcatccgcctcgtcttccacgactgcttc 14283953 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 14275404 ctcatccgcctcgtcttccacgactgcttc 14275375 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 tccgcatcctcttccacgactgcttc 429 ||||| |||||||||||||||||||| Sbjct: 2860713 tccgcctcctcttccacgactgcttc 2860738
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 84796 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 84737 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84736 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 84677 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 84676 caaccttttgaactgcctgctgaatc 84651
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119903 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 119844 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119843 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119784 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 119783 caaccttttgaactgcctgctgaatc 119758 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95215 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 95274 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95275 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95334 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 95335 caaccttttgaactgcctgctgaatc 95360
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122264 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 122323 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122324 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 122383 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 122384 caaccttttgaactgcctgctgaatc 122409 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 13989 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 14048 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14049 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 14108 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 14109 caaccttttgaactgcctgctgaatc 14134
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 140797 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 140856 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140857 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 140916 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 140917 caaccttttgaactgcctgctgaatc 140942
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 93393 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 93452 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93453 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 93512 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 93513 caaccttttgaactgcctgctgaatc 93538
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 58622 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 58563 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58562 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 58503 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 58502 caaccttttgaactgcctgctgaatc 58477
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 27457 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 27516 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27517 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 27576 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 27577 caaccttttgaactgcctgctgaatc 27602
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9268149 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 9268208 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268209 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9268268 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 9268269 caaccttttgaactgcctgctgaatc 9268294 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9227649 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 9227708 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227709 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9227768 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 9227769 caaccttttgaactgcctgctgaatc 9227794 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9164238 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 9164297 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164298 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9164357 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 9164358 caaccttttgaactgcctgctgaatc 9164383 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9056063 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 9056122 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056123 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9056182 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 9056183 caaccttttgaactgcctgctgaatc 9056208 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 404 tccgcatcctcttccacgactgcttcccgcagg 436 |||||||| |||||||||||||||||||||||| Sbjct: 35281599 tccgcatcttcttccacgactgcttcccgcagg 35281567 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 400 ctcatccgcatcctcttccacgactgcttcccgcagg 436 |||||||| ||| |||||||||||||||||||||||| Sbjct: 35243426 ctcatccgtatcttcttccacgactgcttcccgcagg 35243390 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 404 tccgcatcctcttccacgactgcttcccgcagg 436 |||||||| |||||||||||||||||||||||| Sbjct: 35223901 tccgcatcttcttccacgactgcttcccgcagg 35223869 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgctc 459 |||||||||||||||| |||||| |||||||| || ||||||||| Sbjct: 20963595 cttccacgactgcttcgtgcaggggtgcgacgcgtcggtgctgctc 20963640 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 404 tccgcatcctcttccacgactgcttcccgcagg 436 |||||||| |||||||||||||| ||||||||| Sbjct: 35258901 tccgcatcttcttccacgactgcctcccgcagg 35258869 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 404 tccgcatcctcttccacgactgcttcccgcagg 436 |||||||| ||||||||||||||||||| |||| Sbjct: 35251538 tccgcatcttcttccacgactgcttcccacagg 35251506 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 404 tccgcatcctcttccacgactgcttcccgcagg 436 |||||||| ||||||||||||||||||| |||| Sbjct: 35228560 tccgcatcttcttccacgactgcttcccccagg 35228528 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 401 tcatccgcatcctcttccacgactgcttc 429 |||||||||| |||||||||||||||||| Sbjct: 366812 tcatccgcatgctcttccacgactgcttc 366784
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19938134 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 19938193 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938194 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 19938253 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 19938254 caaccttttgaactgcctgctgaatc 19938279 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10387001 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 10387060 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387061 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10387120 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 10387121 caaccttttgaactgcctgctgaatc 10387146 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10277297 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 10277238 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277237 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10277178 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 10277177 caaccttttgaactgcctgctgaatc 10277152 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Minus Query: 400 ctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctcc 450 ||||||||| ||| |||||||||||||||| | ||||||||||||||| Sbjct: 468243 ctcatccgcctccacttccacgactgcttcgtcaacggctgcgacgcctcc 468193 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 ttccacgactgcttcccgcagggctgcgacgc 446 ||||||||||||||| |||||| |||||||| Sbjct: 637602 ttccacgactgcttcgtgcaggggtgcgacgc 637571
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9242132 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 9242073 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242072 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 9242013 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 9242012 caaccttttgaactgcctgctgaatc 9241987 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 404 tccgcatcctcttccacgactgcttcccgcagggctgcgacgcctccgt 452 ||||| ||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 691076 tccgcctccacttccatgactgcttcgtccagggctgcgacgcctccgt 691124
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31598316 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 31598375 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598376 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 31598435 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 31598436 caaccttttgaactgcctgctgaatc 31598461 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 390 ggcgccggcgctcatccgcatcctcttccacgactgcttc 429 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 14338211 ggcgccggc-ctcatccgcatgctcttccacgactgcttc 14338249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 390 ggcgccggcgctcatccgcatcctcttccacgactgcttc 429 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 14328337 ggcgccggc-ctcatccgcatgctcttccacgactgcttc 14328375 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 401 tcatccgcatcctcttccacgactgctt 428 |||||||||| ||||||||||||||||| Sbjct: 14303166 tcatccgcatgctcttccacgactgctt 14303193 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||||| |||||||| ||||||||| Sbjct: 14314062 ctcatccgcatgctcttccatgactgcttc 14314091 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 14278899 ctcatccgcctcgtcttccacgactgcttc 14278928 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 14270379 ctcatccgcctcgtcttccacgactgcttc 14270350 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 tccgcatcctcttccacgactgcttc 429 ||||| |||||||||||||||||||| Sbjct: 2860824 tccgcctcctcttccacgactgcttc 2860849
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 33525632 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 33525691 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525692 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 33525751 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 33525752 caaccttttgaactgcctgctgaatc 33525777 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgctc 459 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 42438592 cttccacgactgcttcgtgcagggctgcgacgcctccgtgctgctc 42438637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 395 cggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctccgtgc 454 ||||||| ||||| ||| |||||||||||||||| |||||||||||||||||| | | Sbjct: 42434284 cggcgctgatccggctccacttccacgactgcttcgtccagggctgcgacgcctccatcc 42434343 Query: 455 tgctc 459 ||||| Sbjct: 42434344 tgctc 42434348 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 395 cggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctcc 450 ||||||| ||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 42422197 cggcgctgatccggctccacttccacgactgcttcgtccagggctgcgacgcctcc 42422252 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 37 ccagagacgaggaagggcgtagcaagcgacgaaatgcttc 76 ||||| |||||| ||||| ||||||||||||||||||||| Sbjct: 19455157 ccagatacgaggtagggcatagcaagcgacgaaatgcttc 19455196 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| ||| |||||||||||||||| Sbjct: 12483076 ctcatccgcctccacttccacgactgcttc 12483105 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 404 tccgcatcctcttccacgactgcttc 429 ||||| |||||||||||||||||||| Sbjct: 10748026 tccgcctcctcttccacgactgcttc 10748001 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 397 gcgctcatccgcatcctcttccacgactgcttc 429 |||||| ||||| || ||||||||||||||||| Sbjct: 29604489 gcgctcgtccgcctcttcttccacgactgcttc 29604521 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gcagggctgcgacgcctccgtgct 455 |||||||||||||||||| ||||| Sbjct: 29604630 gcagggctgcgacgcctcggtgct 29604653
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 47909 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 47850 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47849 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 47790 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 47789 caaccttttgaactgcctgctgaatc 47764
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 70829 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 70888 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70889 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 70948 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 70949 caaccttttgaactgcctgctgaatc 70974
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 53345 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 53286 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53285 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 53226 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 53225 caaccttttgaactgcctgctgaatc 53200
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 60 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatc 146
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 61 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 121 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 122 caaccttttgaactgcctgctgaatc 147
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 60 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatc 146
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 60 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 121 caaccttttgaactgcctgctgaatc 146
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1548 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 1607 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 1667 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 1668 caaccttttgaactgcctgctgaatc 1693
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19949410 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 19949469 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949470 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 19949529 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 19949530 caaccttttgaactgcctgctgaatc 19949555 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10393040 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 10393099 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393100 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10393159 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 10393160 caaccttttgaactgcctgctgaatc 10393185 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10283336 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 10283277 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283276 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 10283217 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 10283216 caaccttttgaactgcctgctgaatc 10283191 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Minus Query: 400 ctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctcc 450 ||||||||| ||| |||||||||||||||| | ||||||||||||||| Sbjct: 468240 ctcatccgcctccacttccacgactgcttcgtcaacggctgcgacgcctcc 468190 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 ttccacgactgcttcccgcagggctgcgacgc 446 ||||||||||||||| |||||| |||||||| Sbjct: 637599 ttccacgactgcttcgtgcaggggtgcgacgc 637568
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119877 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 119818 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119817 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 119758 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 119757 caaccttttgaactgcctgctgaatc 119732 Score = 274 bits (138), Expect = 2e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95162 caaaagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagca 95221 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95222 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 95281 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 95282 caaccttttgaactgcctgctgaatc 95307
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 268 bits (135), Expect = 1e-68 Identities = 141/143 (98%) Strand = Plus / Plus Query: 4 aagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagc 63 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1 aagaggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagc 60 Query: 64 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaa 120 Query: 124 ccttttaaactgcctgctgaatc 146 |||||| |||||||||||||||| Sbjct: 121 ccttttgaactgcctgctgaatc 143
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 260 bits (131), Expect = 4e-66 Identities = 144/147 (97%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgtagc 59 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123673 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagc 123614 Query: 60 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123613 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 123554 Query: 120 tcaaccttttaaactgcctgctgaatc 146 |||||||||| |||||||||| ||||| Sbjct: 123553 tcaaccttttgaactgcctgccgaatc 123527 Score = 260 bits (131), Expect = 4e-66 Identities = 144/147 (97%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgtagc 59 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99064 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagc 99123 Query: 60 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99124 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 99183 Query: 120 tcaaccttttaaactgcctgctgaatc 146 |||||||||| |||||||||| ||||| Sbjct: 99184 tcaaccttttgaactgcctgccgaatc 99210
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 260 bits (131), Expect = 4e-66 Identities = 144/147 (97%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgtagc 59 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5417 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagc 5476 Query: 60 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5477 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 5536 Query: 120 tcaaccttttaaactgcctgctgaatc 146 |||||||||| |||||||||| ||||| Sbjct: 5537 tcaaccttttgaactgcctgccgaatc 5563
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 260 bits (131), Expect = 4e-66 Identities = 144/147 (97%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaag-ggcgtagc 59 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagaggcgtagc 64 Query: 60 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 aagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 124 Query: 120 tcaaccttttaaactgcctgctgaatc 146 |||||||||| |||||||||| ||||| Sbjct: 125 tcaaccttttgaactgcctgccgaatc 151
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 258 bits (130), Expect = 1e-65 Identities = 142/146 (97%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 123467 caaaagaggaaaggcttgcggtggatacctaggtacccagagatgaggaagggcgtagca 123408 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123407 agcgacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggt 123348 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 123347 caaccttttgaactgcctgctgaatc 123322
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 258 bits (130), Expect = 1e-65 Identities = 142/146 (97%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 12826008 caaaagaggaaaggcttgcggtggatacctaggtacccagagatgaggaagggcgtagca 12825949 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12825948 agcgacgaaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggt 12825889 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| |||||||||||||||| Sbjct: 12825888 caaccttttgaactgcctgctgaatc 12825863 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 2020508 ctcatccgcctcttcttccacgactgcttc 2020537 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 2001716 ctcatccgcctcttcttccacgactgcttc 2001745 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 404 tccgcatcctcttccacgactgcttc 429 ||||| |||||||||||||||||||| Sbjct: 1984847 tccgcctcctcttccacgactgcttc 1984872 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 401 tcatccgcatcctcttccacgactgcttc 429 |||||||| || ||||||||||||||||| Sbjct: 1990394 tcatccgcctcttcttccacgactgcttc 1990422 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 395 cggcgctcatccgcatcctcttccacgactgc 426 |||||||| ||||| || |||||||||||||| Sbjct: 7906763 cggcgctcctccgcctcttcttccacgactgc 7906732
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139583 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 139524 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 139523 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 139464 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 139463 caacctttcgaactg-ctgctgaatc 139439 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110362 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 110421 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110422 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 110481 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 110482 caacctttcgaactg-ctgctgaatc 110506
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 127861 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 127802 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127801 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 127742 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 127741 caacctttcgaactg-ctgctgaatc 127717 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107061 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 107120 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107121 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 107180 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 107181 caacctttcgaactg-ctgctgaatc 107205
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 136588 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 136529 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 136528 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 136469 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 136468 caacctttcaaactg-ctgctgaatc 136444 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105837 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105896 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105897 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 105956 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 105957 caacctttcaaactg-ctgctgaatc 105981
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134220 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 134161 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134160 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 134101 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 134100 caacctttcgaactg-ctgctgaatc 134076 Score = 234 bits (118), Expect = 2e-58 Identities = 140/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103751 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 103810 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103811 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 103870 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 103871 caacctttcgaactg-ctgctgaatc 103895
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 132772 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 132713 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132712 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 132653 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||| |||||| |||||||||| Sbjct: 132652 taacctttcaaactg-ctgctgaatc 132628 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 104106 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 104165 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104166 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 104225 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||| |||||| |||||||||| Sbjct: 104226 taacctttcaaactg-ctgctgaatc 104250
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 131664 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 131605 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131604 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 131545 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||| |||||| |||||||||| Sbjct: 131544 taacctttcaaactg-ctgctgaatc 131520 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 102971 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 103030 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103031 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 103090 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||| |||||| |||||||||| Sbjct: 103091 taacctttcaaactg-ctgctgaatc 103115
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 140357 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 140298 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 140297 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 140238 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 140237 caacctttcgaactg-ctgctgaatc 140213 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 109703 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 109762 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 109763 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 109822 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 109823 caacctttcgaactg-ctgctgaatc 109847
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 142105 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 142046 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 142045 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggt 141986 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 141985 caacctttcgaactg-ctgctgaatc 141961 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111552 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 111611 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 111612 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggt 111671 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 111672 caacctttcgaactg-ctgctgaatc 111696
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 134978 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 134919 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134918 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 134859 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 134858 caacctttcgaactg-ctgctgaatc 134834 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105304 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105363 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 105364 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 105423 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 105424 caacctttcgaactg-ctgctgaatc 105448
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatc 155
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatc 155
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatc 155
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatc 155
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatc 155
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 132765 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 132706 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 132705 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 132646 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||| |||||| |||||||||| Sbjct: 132645 taacctttcaaactg-ctgctgaatc 132621 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 104104 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 104163 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104164 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 104223 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||| |||||| |||||||||| Sbjct: 104224 taacctttcaaactg-ctgctgaatc 104248
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 226 bits (114), Expect = 5e-56 Identities = 139/146 (95%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 3 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 62 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 63 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 122 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 123 caacctttcaaactg-ctgctgaatc 147
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 139501 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 139442 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 139441 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 139382 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 139381 caacctttcgaactg-ctgctgaatc 139357 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 109596 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 109655 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 109656 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 109715 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 109716 caacctttcgaactg-ctgctgaatc 109740
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 61 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 62 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 121 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 122 taaccttttgaactg-ctgctgaatc 146
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 132995 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 132936 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 132935 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 132876 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 132875 taaccttttgaactg-ctgctgaatc 132851 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 103769 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 103828 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 103829 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 103888 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 103889 taaccttttgaactg-ctgctgaatc 103913
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 71 agcgacgaaatgcttcggggggttgaaaataagcgtagatccggagattcccgaataggt 130 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||||| |||||||||| Sbjct: 131 caacctttcaaactg-ctgctgaatc 155
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 133956 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 133897 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 133896 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 133837 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 133836 taaccttttgaactg-ctgctgaatc 133812 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 104693 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 104752 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 104753 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 104812 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 104813 taaccttttgaactg-ctgctgaatc 104837
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 139710 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 139651 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 139650 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 139591 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 139590 caacctttcgaactg-ctgctgaatc 139566 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 109589 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 109648 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 109649 agcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggt 109708 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 109709 caacctttcgaactg-ctgctgaatc 109733
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 136297 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 136238 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 136237 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 136178 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 136177 caacctttcgaactg-ctgctgaatc 136153 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 106333 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 106392 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106393 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 106452 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 106453 caacctttcgaactg-ctgctgaatc 106477
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 210 bits (106), Expect = 3e-51 Identities = 131/138 (94%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135893 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 135834 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttt 128 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 135833 aatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaaccttt 135774 Query: 129 taaactgcctgctgaatc 146 |||||| |||||||||| Sbjct: 135773 caaactg-ctgctgaatc 135757 Score = 210 bits (106), Expect = 3e-51 Identities = 131/138 (94%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106016 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 106075 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttt 128 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 106076 aatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaaccttt 106135 Query: 129 taaactgcctgctgaatc 146 |||||| |||||||||| Sbjct: 106136 caaactg-ctgctgaatc 106152
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 136935 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 136876 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 136875 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 136816 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 136815 caacctttcgaactg-ctgctgaatc 136791 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 106622 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 106681 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106682 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 106741 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 106742 caacctttcgaactg-ctgctgaatc 106766
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 1527 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 1586 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1587 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 1646 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 1647 caacctttcgaactg-ctgctgaatc 1671
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 135543 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 135484 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135483 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 135424 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 135423 caacctttcgaactg-ctgctgaatc 135399 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105493 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105552 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105553 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 105612 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 105613 caacctttcgaactg-ctgctgaatc 105637
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 210 bits (106), Expect = 3e-51 Identities = 127/134 (94%) Strand = Plus / Minus Query: 5 agaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 64 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 24063495 agaggaaaggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagag 24063436 Query: 65 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 124 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 24063435 acgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaac 24063376 Query: 125 cttttaaactgcct 138 |||| |||||||| Sbjct: 24063375 attttgaactgcct 24063362
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 135678 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 135619 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135618 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 135559 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 135558 caacctttcgaactg-ctgctgaatc 135534 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105665 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105724 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105725 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 105784 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 105785 caacctttcgaactg-ctgctgaatc 105809
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 135676 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 135617 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135616 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 135557 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 135556 caacctttcgaactg-ctgctgaatc 135532 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105662 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105721 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105722 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 105781 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 105782 caacctttcgaactg-ctgctgaatc 105806
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 135588 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 135529 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135528 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 135469 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 135468 caacctttcgaactg-ctgctgaatc 135444 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105540 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105599 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105600 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 105659 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 105660 caacctttcgaactg-ctgctgaatc 105684
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 210 bits (106), Expect = 3e-51 Identities = 131/138 (94%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136169 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 136110 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttt 128 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 136109 aatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaaccttt 136050 Query: 129 taaactgcctgctgaatc 146 |||||| |||||||||| Sbjct: 136049 caaactg-ctgctgaatc 136033 Score = 210 bits (106), Expect = 3e-51 Identities = 131/138 (94%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106238 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 106297 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttt 128 ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 106298 aatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaaccttt 106357 Query: 129 taaactgcctgctgaatc 146 |||||| |||||||||| Sbjct: 106358 caaactg-ctgctgaatc 106374
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 210 bits (106), Expect = 3e-51 Identities = 127/134 (94%) Strand = Plus / Minus Query: 5 agaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 64 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 23991701 agaggaaaggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagag 23991642 Query: 65 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 124 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 23991641 acgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaac 23991582 Query: 125 cttttaaactgcct 138 |||| |||||||| Sbjct: 23991581 attttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 210 bits (106), Expect = 3e-51 Identities = 127/134 (94%) Strand = Plus / Plus Query: 5 agaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 64 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | Sbjct: 23901 agaggaaaggcttgcggtggatacctaggtacccagagacgaggaaggacgtagcaagag 23960 Query: 65 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 124 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 23961 acgaaatgctttggggagttgaaaataatcatagatccggagattcccaaataggtcaac 24020 Query: 125 cttttaaactgcct 138 |||| |||||||| Sbjct: 24021 attttgaactgcct 24034
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 136295 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 136236 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 136235 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 136176 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 136175 caacctttcgaactg-ctgctgaatc 136151 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 106331 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 106390 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106391 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 106450 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 106451 caacctttcgaactg-ctgctgaatc 106475
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 135555 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 135496 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135495 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 135436 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 135435 caacctttcgaactg-ctgctgaatc 135411 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 105507 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 105566 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105567 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 105626 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 105627 caacctttcgaactg-ctgctgaatc 105651
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 210 bits (106), Expect = 3e-51 Identities = 137/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 103 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 162 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 163 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 222 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 223 caacctttcgaactg-ctgctgaatc 247
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3893 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 3952 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 3953 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 4012 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 4013 taaccttttgaactg-ctgctgaat 4036
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 63 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct: 64 agcgacgaaatgcttcggggagctgaaaataagcatagatccggagattcccgaatgggt 123 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 124 taaccttttgaactg-ctgctgaat 147
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 caaatgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 63 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||| Sbjct: 64 agcgacgaaatgcttcggggagctgaaaataagtatggatccggagattcccgaataggt 123 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||||||||| ||||||||| Sbjct: 124 taaccttttaaactg-ctgctgaat 147
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 62 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 63 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 122 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 123 taaccttttgaactg-ctgctgaat 146
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 151242 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 151183 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 151182 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 151123 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 151122 taaccttttgaactg-ctgctgaat 151099 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 117424 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 117483 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 117484 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 117543 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 117544 taaccttttgaactg-ctgctgaat 117567
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 208 bits (105), Expect = 1e-50 Identities = 136/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 62 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| Sbjct: 63 agcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggt 122 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 123 taaccttttgaactg-ctgctgaat 146
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 206 bits (104), Expect = 5e-50 Identities = 123/128 (96%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 138 |||| |||||||||| |||||||||||||||||| ||||||| |||||||||||||| || Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactg-ct 123 Query: 139 gctgaatc 146 |||||||| Sbjct: 124 gctgaatc 131
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 206 bits (104), Expect = 5e-50 Identities = 122/128 (95%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 130532 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaggggcgtagta 130473 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130472 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 130413 Query: 121 caaccttt 128 |||||||| Sbjct: 130412 caaccttt 130405 Score = 206 bits (104), Expect = 5e-50 Identities = 122/128 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 101924 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaggggcgtagta 101983 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 101984 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 102043 Query: 121 caaccttt 128 |||||||| Sbjct: 102044 caaccttt 102051
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 202 bits (102), Expect = 7e-49 Identities = 134/142 (94%), Gaps = 2/142 (1%) Strand = Plus / Plus Query: 6 gaggaaaggcttgc-ggtggatacctaggcacccagagacgaggaagggcgtagcaagcg 64 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 56 gaggaaaggcttacnggtggatacctaggcacccagagacgaggaagggcgtagtaagcg 115 Query: 65 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 124 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 116 acgaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaac 175 Query: 125 cttttaaactgcctgctgaatc 146 |||| ||||| |||||||||| Sbjct: 176 ctttcgaactg-ctgctgaatc 196
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 202 bits (102), Expect = 7e-49 Identities = 121/126 (96%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 2125 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||| Sbjct: 2126 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactg-ctg 2184 Query: 140 ctgaat 145 |||||| Sbjct: 2185 ctgaat 2190
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 202 bits (102), Expect = 7e-49 Identities = 121/126 (96%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 118068 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||| Sbjct: 118067 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactg-ctg 118009 Query: 140 ctgaat 145 |||||| Sbjct: 118008 ctgaat 118003 Score = 202 bits (102), Expect = 7e-49 Identities = 121/126 (96%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 90034 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||| Sbjct: 90035 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactg-ctg 90093 Query: 140 ctgaat 145 |||||| Sbjct: 90094 ctgaat 90099
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 202 bits (102), Expect = 7e-49 Identities = 136/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 136026 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 135967 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135966 atcgacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaataggg 135907 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 135906 caacctttcgaactg-ctgctgaatc 135882 Score = 202 bits (102), Expect = 7e-49 Identities = 136/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 106112 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 106171 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106172 atcgacgaaatgcttcggggagttgaaaataagcatagatccggggattcccgaataggg 106231 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 106232 caacctttcgaactg-ctgctgaatc 106256
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 200 bits (101), Expect = 3e-48 Identities = 135/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 4234 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagta 4293 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4294 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 4353 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 4354 caacctttcgaactg-ctgctgaat 4377
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 200 bits (101), Expect = 3e-48 Identities = 126/133 (94%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116194 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 116135 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 132 |||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||| Sbjct: 116134 cttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaa 116075 Query: 133 ctgcctgctgaat 145 ||| ||||||||| Sbjct: 116074 ctg-ctgctgaat 116063 Score = 200 bits (101), Expect = 3e-48 Identities = 126/133 (94%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85926 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 85985 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 132 |||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||| Sbjct: 85986 cttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaa 86045 Query: 133 ctgcctgctgaat 145 ||| ||||||||| Sbjct: 86046 ctg-ctgctgaat 86057
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 200 bits (101), Expect = 3e-48 Identities = 135/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 23691 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagta 23632 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 23631 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 23572 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 23571 caacctttcgaactg-ctgctgaat 23548
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 200 bits (101), Expect = 3e-48 Identities = 135/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 79767 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagta 79708 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 79707 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 79648 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 79647 caacctttcgaactg-ctgctgaat 79624
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 200 bits (101), Expect = 3e-48 Identities = 135/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 4503 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagta 4562 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4563 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 4622 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 4623 caacctttcgaactg-ctgctgaat 4646
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 200 bits (101), Expect = 3e-48 Identities = 135/145 (93%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 4503 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagta 4562 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4563 agcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggt 4622 Query: 121 caaccttttaaactgcctgctgaat 145 |||||||| ||||| ||||||||| Sbjct: 4623 caacctttcgaactg-ctgctgaat 4646
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 198 bits (100), Expect = 1e-47 Identities = 121/128 (94%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 131788 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtatta 131729 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 131728 atcgacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggt 131669 Query: 121 caaccttt 128 |||||||| Sbjct: 131668 caaccttt 131661 Score = 198 bits (100), Expect = 1e-47 Identities = 121/128 (94%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 101657 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtatta 101716 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 101717 atcgacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggt 101776 Query: 121 caaccttt 128 |||||||| Sbjct: 101777 caaccttt 101784
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 198 bits (100), Expect = 1e-47 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 81 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 142 |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 82 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg-ctgctg 140 Query: 143 aatc 146 |||| Sbjct: 141 aatc 144
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 198 bits (100), Expect = 1e-47 Identities = 103/104 (99%) Strand = Plus / Minus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatc 19433958 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 413 tcttccacgactgcttcccgcagggctgcgacgcctcc 450 ||||||||||||||||| |||||||||||||||||| Sbjct: 7937844 tcttccacgactgcttcgtccagggctgcgacgcctcc 7937881 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 400 ctcatccgcatcctcttccacgactgcttc 429 ||||||||| || ||||||||||||||||| Sbjct: 7947981 ctcatccgcctcttcttccacgactgcttc 7948010 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 agcagcagcggccatcgccgtcct 257 ||||||||| |||||||||||||| Sbjct: 32631155 agcagcagcagccatcgccgtcct 32631132
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 198 bits (100), Expect = 1e-47 Identities = 103/104 (99%) Strand = Plus / Minus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatc 51485
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 198 bits (100), Expect = 1e-47 Identities = 103/104 (99%) Strand = Plus / Minus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatc 119449
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 198 bits (100), Expect = 1e-47 Identities = 103/104 (99%) Strand = Plus / Plus Query: 43 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 103 ggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatc 6173
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 198 bits (100), Expect = 1e-47 Identities = 115/120 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 81 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 140 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141 agcgacgaaatgcttcgtggagttgaaaataagcatagatccggagattcccgaataggt 200
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 198 bits (100), Expect = 1e-47 Identities = 112/116 (96%) Strand = Plus / Minus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 724 aggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgac 665 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 122 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 664 gaaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtca 609
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 196 bits (99), Expect = 4e-47 Identities = 102/103 (99%) Strand = Plus / Plus Query: 44 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 104 gagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatc 103
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 196 bits (99), Expect = 4e-47 Identities = 111/115 (96%) Strand = Plus / Plus Query: 22 tggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgggga 81 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcgggga 60 Query: 82 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 61 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 115
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||| | Sbjct: 52683 caaacgagaaaaggcttacggtggatacctaggcacccagagacgaggaaggatgtagta 52624 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52623 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 52564 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| ||||| |||||||||| Sbjct: 52563 caaccttttgaactg-ctgctgaatc 52539 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||| | Sbjct: 37145 caaacgagaaaaggcttacggtggatacctaggcacccagagacgaggaaggatgtagta 37204 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37205 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 37264 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| ||||| |||||||||| Sbjct: 37265 caaccttttgaactg-ctgctgaatc 37289
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| | | Sbjct: 86265 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtggta 86324 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 86325 agcgacgaaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggt 86384 Query: 121 caaccttttaaactgcctgctgaatc 146 |||| ||| ||||| |||||||||| Sbjct: 86385 taacccttttaactg-ctgctgaatc 86409
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| | Sbjct: 46255 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaagaagggcgtatta 46314 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 46315 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggt 46374 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 46375 caacctttcgaactg-ctgctgaatc 46399
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||| | Sbjct: 4073 caaacgagaaaaggcttacggtggatacctaggcacccagagacgaggaaggatgtagta 4132 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4133 atcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 4192 Query: 121 caaccttttaaactgcctgctgaatc 146 ||||||||| ||||| |||||||||| Sbjct: 4193 caaccttttgaactg-ctgctgaatc 4217
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 194 bits (98), Expect = 2e-46 Identities = 135/146 (92%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| | | Sbjct: 88351 caaacgaggaagggcttacggtggatacctaggcacccagagacgaggaagggcgtggta 88410 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 88411 agcgacgaaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggt 88470 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| |||| |||||||||| Sbjct: 88471 taacctttttcactg-ctgctgaatc 88495
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 190 bits (96), Expect = 3e-45 Identities = 127/136 (93%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 10 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 69 |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 128434 aaaggcttacggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaa 128375 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 128374 atgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaacctttt 128315 Query: 130 aaactgcctgctgaat 145 ||||| ||||||||| Sbjct: 128314 gaactg-ctgctgaat 128300 Score = 190 bits (96), Expect = 3e-45 Identities = 127/136 (93%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 10 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 69 |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 95013 aaaggcttacggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaa 95072 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 95073 atgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaacctttt 95132 Query: 130 aaactgcctgctgaat 145 ||||| ||||||||| Sbjct: 95133 gaactg-ctgctgaat 95147
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 188 bits (95), Expect = 1e-44 Identities = 130/139 (93%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 147 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 88 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 87 aatgcttcggggagttgaaaataagcgtagatccggagattcccgatataggtcaacctt 28 Query: 128 ttaaactgcctgctgaatc 146 | ||||| |||||||||| Sbjct: 27 tcgaactg-ctgctgaatc 10
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 188 bits (95), Expect = 1e-44 Identities = 130/139 (93%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 82 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 81 aatgcttcggggagttgaaaataagcgtagatccggagattcccgatataggtcaacctt 22 Query: 128 ttaaactgcctgctgaatc 146 | ||||| |||||||||| Sbjct: 21 tcgaactg-ctgctgaatc 4
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 186 bits (94), Expect = 4e-44 Identities = 135/146 (92%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| | Sbjct: 142875 caaacgaggaaaggcttacggtg-atacctaggcacccagagacgaggaagggcgtagta 142817 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| Sbjct: 142816 agcgacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggt 142757 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 142756 caacctttcgaactg-ctgctgaatc 142732 Score = 186 bits (94), Expect = 4e-44 Identities = 135/146 (92%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| | Sbjct: 110453 caaacgaggaaaggcttacggtg-atacctaggcacccagagacgaggaagggcgtagta 110511 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| Sbjct: 110512 agcgacgaaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggt 110571 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 110572 caacctttcgaactg-ctgctgaatc 110596
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 186 bits (94), Expect = 4e-44 Identities = 135/146 (92%), Gaps = 2/146 (1%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 1770 caaacgaggaaagggttacggtggatacctaggcacccagagacgaggaagggcgtagta 1829 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1830 atc-acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggg 1888 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 1889 caacctttcgaactg-ctgctgaatc 1913
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 186 bits (94), Expect = 4e-44 Identities = 115/122 (94%) Strand = Plus / Minus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146544 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 146485 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 132 |||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| || Sbjct: 146484 cttcggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaa 146425 Query: 133 ct 134 || Sbjct: 146424 ct 146423 Score = 186 bits (94), Expect = 4e-44 Identities = 115/122 (94%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111918 ggcttacggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 111977 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 132 |||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| || Sbjct: 111978 cttcggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaa 112037 Query: 133 ct 134 || Sbjct: 112038 ct 112039
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 186 bits (94), Expect = 4e-44 Identities = 119/126 (94%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 ||| ||||||||||||| ||||||||||||||| ||||||| |||||||| ||||| ||| Sbjct: 83 gagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactg-ctg 141 Query: 140 ctgaat 145 |||||| Sbjct: 142 ctgaat 147
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 186 bits (94), Expect = 4e-44 Identities = 134/146 (91%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||| |||||||||||||| | Sbjct: 177034 caaaggaggaaaggcttagggtggatacctaggcacccagagaggaggaagggcgtagta 177093 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct: 177094 atcgacgaaatgcttcggggagttgaaaatcagcatagatccggagattcccgaataggg 177153 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 177154 caacctttcgaactg-ctgctgaatc 177178
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 184 bits (93), Expect = 2e-43 Identities = 115/121 (95%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 147 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 88 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 87 aatgcttcggggagttgaaaataagcgtagatccggagattcccgatataggtcaacctt 28 Query: 128 t 128 | Sbjct: 27 t 27
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 182 bits (92), Expect = 7e-43 Identities = 125/136 (91%) Strand = Plus / Plus Query: 10 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 69 ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 143931 aaaggcttgcggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaa 143990 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| Sbjct: 143991 atgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttcc 144050 Query: 130 aaactgcctgctgaat 145 |||||||||||||||| Sbjct: 144051 aaactgcctgctgaat 144066 Score = 182 bits (92), Expect = 7e-43 Identities = 125/136 (91%) Strand = Plus / Minus Query: 10 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 69 ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 88920 aaaggcttgcggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaa 88861 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttt 129 ||||||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| Sbjct: 88860 atgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaaccttcc 88801 Query: 130 aaactgcctgctgaat 145 |||||||||||||||| Sbjct: 88800 aaactgcctgctgaat 88785
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtatta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 71 atcgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaataggg 130 Query: 121 caaccttt 128 |||||||| Sbjct: 131 caaccttt 138
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 11 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtatta 70 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 71 atcgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaataggg 130 Query: 121 caaccttt 128 |||||||| Sbjct: 131 caaccttt 138
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 182 bits (92), Expect = 7e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 499 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtatta 558 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 559 atcgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaataggg 618 Query: 121 caaccttt 128 |||||||| Sbjct: 619 caaccttt 626
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 180 bits (91), Expect = 3e-42 Identities = 116/123 (94%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 24 gatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 83 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1 gatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagt 60 Query: 84 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 143 ||||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||||| Sbjct: 61 tgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg-ctgctga 119 Query: 144 atc 146 ||| Sbjct: 120 atc 122
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 180 bits (91), Expect = 3e-42 Identities = 91/91 (100%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 2558 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2559 agcgacgaaatgcttcggggagttgaaaata 2589
>gb|DQ001731.1| Secale cereale voucher P.M. McNutt 006 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2582 Score = 180 bits (91), Expect = 3e-42 Identities = 91/91 (100%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2492 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 2551 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2552 agcgacgaaatgcttcggggagttgaaaata 2582
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 180 bits (91), Expect = 3e-42 Identities = 100/103 (97%) Strand = Plus / Minus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103 aggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgac 44 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagatt 109 |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 43 gaaatgcttcggggagttgaaaataagcgtagatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 180 bits (91), Expect = 3e-42 Identities = 100/103 (97%) Strand = Plus / Minus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103 aggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgac 44 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagatt 109 |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 43 gaaatgcttcggggagttgaaaataagcgtagatccggagatt 1
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 180 bits (91), Expect = 3e-42 Identities = 129/139 (92%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131860 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 131801 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| Sbjct: 131800 aatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacctt 131741 Query: 128 ttaaactgcctgctgaatc 146 | ||||| |||||||||| Sbjct: 131740 tcgaactg-ctgctgaatc 131723 Score = 180 bits (91), Expect = 3e-42 Identities = 129/139 (92%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103534 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 103593 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| Sbjct: 103594 aatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacctt 103653 Query: 128 ttaaactgcctgctgaatc 146 | ||||| |||||||||| Sbjct: 103654 tcgaactg-ctgctgaatc 103671
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 180 bits (91), Expect = 3e-42 Identities = 135/147 (91%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||| | Sbjct: 89879 caaacgaggaaaggcttacggtggataccaaggcacccagagacgaggaagagcgtagta 89820 Query: 61 agcgacg-aaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 119 ||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 89819 agcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattccggaatagg 89760 Query: 120 tcaaccttttaaactgcctgctgaatc 146 | |||||||| ||||| |||||||||| Sbjct: 89759 ttaaccttttgaactg-ctgctgaatc 89734
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 180 bits (91), Expect = 3e-42 Identities = 135/147 (91%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||| | Sbjct: 391 caaacgaggaaaggcttacggtggataccaaggcacccagagacgaggaagagcgtagta 450 Query: 61 agcgacg-aaatgcttcggggagttgaaaataagcatagatccggagattcccaaatagg 119 ||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 451 agcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattccggaatagg 510 Query: 120 tcaaccttttaaactgcctgctgaatc 146 | |||||||| ||||| |||||||||| Sbjct: 511 ttaaccttttgaactg-ctgctgaatc 536
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 180 bits (91), Expect = 3e-42 Identities = 129/139 (92%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2610 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 2669 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| Sbjct: 2670 aatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacctt 2729 Query: 128 ttaaactgcctgctgaatc 146 | ||||| |||||||||| Sbjct: 2730 tcgaactg-ctgctgaatc 2747
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 180 bits (91), Expect = 3e-42 Identities = 129/139 (92%), Gaps = 2/139 (1%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 865 gaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 924 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| Sbjct: 925 aatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacctt 984 Query: 128 ttaaactgcctgctgaatc 146 | ||||| |||||||||| Sbjct: 985 tcgaactg-ctgctgaatc 1002
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 174 bits (88), Expect = 2e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| | Sbjct: 3 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggtgtagta 62 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattccc 112 | ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 63 atcgacgaaatgcttcggggagttgaaaataagcatagatccgtagattccc 114
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 168 bits (85), Expect = 1e-38 Identities = 113/121 (93%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 225 gaaaggcttatggtagatacctaggcacccagagacgaggaagggcgtagtaagcgacga 284 Query: 69 aatgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaacctt 127 |||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||||| Sbjct: 285 aatgcttcggggagttgaaaatcagcgtagatccggagattcccgatataggtcaacctt 344 Query: 128 t 128 | Sbjct: 345 t 345
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2604 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 2663 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2664 agcgacgaaatgcttcggggagttgaaaata 2694
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2631 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagca 2690 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2691 agcgacgaaatgcttcggggagttgaaaata 2721
>dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E04, full insert sequence Length = 986 Score = 161 bits (81), Expect = 2e-36 Identities = 84/85 (98%) Strand = Plus / Plus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 aggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgac 60 Query: 67 gaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||| Sbjct: 61 gaaatgcttcggggagttgaaaata 85
>gb|M21453.1|SPICPRGDG Spinach chloroplast 16S ribosomal RNA gene (3' end), Ile-tRNA and Ala-tRNA genes, and 23S ribosomal RNA gene (5' end) Length = 2391 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 2288 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtatta 2347 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccgg 104 | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2348 atcgacgaaatgcttcggggagttgaaaataagcagagatccgg 2391
>gb|DQ001752.1| Salix nigra voucher P.M. McNutt 003 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2691 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2601 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2660 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2661 agcgacgaaatgcttcggggagttgaaaata 2691
>gb|DQ001748.1| Fragaria vesca voucher P.M. McNutt 020 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2737 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2647 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2706 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2707 agcgacgaaatgcttcggggagttgaaaata 2737
>gb|DQ001742.1| Daucus carota voucher P.M. McNutt 005 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2698 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2608 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2667 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2668 agcgacgaaatgcttcggggagttgaaaata 2698
>gb|DQ001741.1| Dahlia hybrid cultivar voucher P.M. McNutt 007 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2554 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2464 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2523 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2524 agcgacgaaatgcttcggggagttgaaaata 2554
>gb|DQ001740.1| Helianthus annuus voucher P.M. McNutt 021 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2551 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2461 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2520 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2521 agcgacgaaatgcttcggggagttgaaaata 2551
>gb|DQ001739.1| Lactuca sativa voucher P.M. McNutt 016 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2627 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2686 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2687 agcgacgaaatgcttcggggagttgaaaata 2717
>gb|DQ001738.1| Lactuca sativa voucher P.M. McNutt 004 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2623 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2682 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2683 agcgacgaaatgcttcggggagttgaaaata 2713
>gb|DQ001735.1| Lemna gibba voucher P.M. McNutt 008 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2510 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2420 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2479 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2480 agcgacgaaatgcttcggggagttgaaaata 2510
>gb|DQ001734.1| Dracaena sanderiana voucher P.M. McNutt 011 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2623 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaagaagggcgtagca 2682 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||||||||| Sbjct: 2683 agcgacgaaatgcttcggggagttgaaaata 2713
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 155 bits (78), Expect = 2e-34 Identities = 114/126 (90%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 ||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 83 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 142 Query: 140 ctgaat 145 |||||| Sbjct: 143 ctgaat 148
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 153 bits (77), Expect = 6e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||| |||||||||| || |||||||| | Sbjct: 717 ggcttacggtggatacctaggcacccagagacgaagaagggcgtactaaccgacgaaacg 776 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 132 |||||||||| |||||| |||||| ||||||||||||||| |||||| |||||| || || Sbjct: 777 cttcggggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaa 836 Query: 133 ctgcctgctgaat 145 || |||||||||| Sbjct: 837 cttcctgctgaat 849
>gb|DQ001754.1| Citrus reticulata voucher P.M. McNutt 019 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2728 Score = 153 bits (77), Expect = 6e-34 Identities = 83/85 (97%) Strand = Plus / Plus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2644 aggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgac 2703 Query: 67 gaaatgcttcggggagttgaaaata 91 ||||||||||||||||||||||||| Sbjct: 2704 gaaatgcttcggggagttgaaaata 2728
>dbj|AK109207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C10, full insert sequence Length = 777 Score = 153 bits (77), Expect = 6e-34 Identities = 80/81 (98%) Strand = Plus / Plus Query: 8 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 67 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 ggaaaggcttgcggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacg 60 Query: 68 aaatgcttcggggagttgaaa 88 ||||||||||||||||||||| Sbjct: 61 aaatgcttcggggagttgaaa 81
>gb|AF141151.1|AF141151 Vigna unguiculata clone VU124KNF1-1 16S ribosomal RNA gene, partial sequence and 18S ribosomal RNA gene, partial sequence Length = 345 Score = 151 bits (76), Expect = 2e-33 Identities = 110/120 (91%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 10 aaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaa 69 |||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 215 aaaggcttatggtagatacctaggcacccatagacgaggaagggcgtagtaagcgacgaa 274 Query: 70 atgcttcggggagttgaaaataagcatagatccggagattccc-aaataggtcaaccttt 128 |||||| |||||||||||||| ||| ||||||||||||||||| | |||||||||||||| Sbjct: 275 atgctttggggagttgaaaatcagcgtagatccggagattcccgatataggtcaaccttt 334
>gb|DQ001751.1| Rosa hybrid cultivar voucher P.M. McNutt 017 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 149 bits (75), Expect = 9e-33 Identities = 81/83 (97%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2499 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 2558 Query: 69 aatgcttcggggagttgaaaata 91 ||||||||||||||||||||||| Sbjct: 2559 aatgcttcggggagttgaaaata 2581
>gb|DQ001750.1| Cucurbita pepo voucher P.M. McNutt 025 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 149 bits (75), Expect = 9e-33 Identities = 81/83 (97%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2499 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 2558 Query: 69 aatgcttcggggagttgaaaata 91 ||||||||||||||||||||||| Sbjct: 2559 aatgcttcggggagttgaaaata 2581
>gb|DQ001749.1| Cucurbita pepo voucher P.M. McNutt 015 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2578 Score = 149 bits (75), Expect = 9e-33 Identities = 81/83 (97%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2496 gaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacga 2555 Query: 69 aatgcttcggggagttgaaaata 91 ||||||||||||||||||||||| Sbjct: 2556 aatgcttcggggagttgaaaata 2578
>gb|DQ001747.1| Nicotiana tabacum voucher P.M. McNutt 023 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2379 Score = 149 bits (75), Expect = 9e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2289 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2348 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 | ||||||||||||||||||||||||||||| Sbjct: 2349 atcgacgaaatgcttcggggagttgaaaata 2379
>gb|DQ001746.1| Lycopersicon esculentum voucher P.M. McNutt 024 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2494 Score = 149 bits (75), Expect = 9e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2404 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2463 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 | ||||||||||||||||||||||||||||| Sbjct: 2464 atcgacgaaatgcttcggggagttgaaaata 2494
>gb|DQ001745.1| Solanum tuberosum voucher P.M. McNutt 010 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2495 Score = 149 bits (75), Expect = 9e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2405 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2464 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 | ||||||||||||||||||||||||||||| Sbjct: 2465 atcgacgaaatgcttcggggagttgaaaata 2495
>gb|DQ001744.1| Ocimum basilicum voucher P.M. McNutt 002 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 149 bits (75), Expect = 9e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2627 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2686 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 | ||||||||||||||||||||||||||||| Sbjct: 2687 atcgacgaaatgcttcggggagttgaaaata 2717
>gb|DQ001743.1| Mentha x piperita voucher P.M. McNutt 012 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2734 Score = 149 bits (75), Expect = 9e-33 Identities = 87/91 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct: 2644 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagta 2703 Query: 61 agcgacgaaatgcttcggggagttgaaaata 91 | ||||||||||||||||||||||||||||| Sbjct: 2704 atcgacgaaatgcttcggggagttgaaaata 2734
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 147 bits (74), Expect = 4e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 186 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 || ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 187 aagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 246 Query: 140 ctgaat 145 |||||| Sbjct: 247 ctgaat 252
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 143 bits (72), Expect = 6e-31 Identities = 112/126 (88%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 69 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 139 ||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 70 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 129 Query: 140 ctgaat 145 |||||| Sbjct: 130 ctgaat 135
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||| ||||| ||||||||||||||| || ||||||||| ||||||||||| ||||||| Sbjct: 4043 aggaagggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgac 4102 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattccc 112 ||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 4103 gaaatgcttcggggagtcgaaaacaggcatagatccggagattccc 4148
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||| ||||| ||||||||||||||| || ||||||||| ||||||||||| ||||||| Sbjct: 10 aggaagggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgac 69 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattccc 112 ||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 70 gaaatgcttcggggagtcgaaaacaggcatagatccggagattccc 115
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 7 aggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgac 66 ||||| ||||| ||||||||||||||| || ||||||||| ||||||||||| ||||||| Sbjct: 10 aggaagggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgac 69 Query: 67 gaaatgcttcggggagttgaaaataagcatagatccggagattccc 112 ||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 70 gaaatgcttcggggagtcgaaaacaggcatagatccggagattccc 115
>gb|DQ001755.1| Physcomitrella patens voucher P.M. McNutt 013 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2405 Score = 135 bits (68), Expect = 1e-28 Identities = 71/72 (98%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 2393 Query: 80 gagttgaaaata 91 ||| |||||||| Sbjct: 2394 gagctgaaaata 2405
>gb|DQ001753.1| Lathyrus odoratus voucher P.M. McNutt 022 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2668 Score = 135 bits (68), Expect = 1e-28 Identities = 80/84 (95%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 2576 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtagta 2635 Query: 61 agcgacgaaatgcttcggggagtt 84 |||||||||||||||||||||||| Sbjct: 2636 agcgacgaaatgcttcggggagtt 2659
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 133 bits (67), Expect = 6e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 248075 caaacgaggaaaggcccacggtggatacctaggcacccagagacgaggaagggcgtatta 248016 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 | || ||||||||||||||||||||||||||||| |||||||| Sbjct: 248015 atcggcgaaatgcttcggggagttgaaaataagcgtagatccg 247973
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 133 bits (67), Expect = 6e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 151811 caaacgaggaaaggcccacggtggatacctaggcacccagagacgaggaagggcgtatta 151752 Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 | || ||||||||||||||||||||||||||||| |||||||| Sbjct: 151751 atcggcgaaatgcttcggggagttgaaaataagcgtagatccg 151709
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 82 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || ||| ||||||||| |||||||| |||||| |||||| Sbjct: 83 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacct 129
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 123 bits (62), Expect = 5e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||| ||||||||||| || |||||||| | Sbjct: 1769 ggcttacggtggatacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacg 1828 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||||||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1829 cttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 123 bits (62), Expect = 5e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 16 ggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatg 75 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 76 cttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacct 129
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 123 bits (62), Expect = 5e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 125249 ggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatg 125190 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 125189 cttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacct 125136 Score = 123 bits (62), Expect = 5e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 94617 ggcttacggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatg 94676 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 94677 cttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacct 94730
>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds Length = 1308 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 364 gagacgttccggcgcgacgtgggcgtggcgccggcgctcatccgcatcctcttccacgac 423 ||||| ||||| |||||||| ||||| || ||||| |||||||||||||||||||||||| Sbjct: 175 gagaccttccgccgcgacgtcggcgtcgccccggccctcatccgcatcctcttccacgac 234 Query: 424 tgcttcccgcagggctgcgacgcctccgtgctgctca 460 ||||||||||||||||||||||| || ||||| |||| Sbjct: 235 tgcttcccgcagggctgcgacgcgtcggtgctcctca 271 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 218 cagcaatggcgtccagagcagcagcggcc 246 |||| |||||||||||||||||||||||| Sbjct: 23 cagccatggcgtccagagcagcagcggcc 51
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 121 bits (61), Expect = 2e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||| || || ||||||| || || || ||||||||||||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgcttcggg 80 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 ||||| ||||||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 81 gagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 137
>gb|DQ001737.1| Hatiora gaertneri voucher P.M. McNutt 009 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2794 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 ||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||| Sbjct: 2712 gaaaggcttacggtggattcctaggcacccagagacgaggaagggcgtaataatcgacga 2771 Query: 69 aatgcttcggggagttgaaaa 89 ||||||||||||||||||||| Sbjct: 2772 aatgcttcggggagttgaaaa 2792
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||| Sbjct: 3057 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgctttggg 3116 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || ||| ||||||||| |||||||| |||||| |||||| Sbjct: 3117 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacct 3163
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 9 gaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacga 68 |||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 3791 gaaaggctggcggtggatacctatgcacccagagacgaggaagggcatagttagcgacga 3732 Query: 69 aatgcttcggggagttgaaaataagcatagatccggag 106 |||||||| | |||||| |||||||| |||||| |||| Sbjct: 3731 aatgcttcagagagttgcaaataagcgtagatcaggag 3694
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 113 bits (57), Expect = 5e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 86 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 145 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 146 c 146 | Sbjct: 61 c 61
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| ||||||||||||||| || ||||||||| ||||||||||| ||||||||||| | Sbjct: 16 ggcttacggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaacg 75 Query: 73 cttcggggagttgaaaataagcatagatccggagattccc 112 ||||||||||| ||||| | | ||||||||||||||||| Sbjct: 76 cttcggggagtcgaaaacagacgtagatccggagattccc 115
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtcagcgacgaaatgcttcggg 82 Query: 80 gagttgaaaataagcatagatccggagattcccaaatagg 119 ||| || || ||||||| ||||| |||||||| |||||| Sbjct: 83 gagctgcgaacaagcataaatccgaagattcccgaatagg 122
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 111 bits (56), Expect = 2e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 1849 Query: 80 gagttgaaaataagcatagatccggagattcccaaatagg 119 ||| || || ||| ||| ||||| |||||||| |||||| Sbjct: 1850 gagctgcgaacaagtataaatccgaagattcccgaatagg 1889
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 109 bits (55), Expect = 8e-21 Identities = 103/118 (87%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 8 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 67 |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 139259 ggaaaggcttacggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac- 139201 Query: 68 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 125 ||||||||||| || | |||||||||||||||||||| ||| ||| ||| |||| Sbjct: 139200 -aatgcttcgggaagccagagataagcatagatccggagatccccgaatgggttaacc 139144 Score = 109 bits (55), Expect = 8e-21 Identities = 103/118 (87%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 8 ggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacg 67 |||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 82618 ggaaaggcttacggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac- 82676 Query: 68 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 125 ||||||||||| || | |||||||||||||||||||| ||| ||| ||| |||| Sbjct: 82677 -aatgcttcgggaagccagagataagcatagatccggagatccccgaatgggttaacc 82733
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 105 bits (53), Expect = 1e-19 Identities = 93/107 (86%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| |||||||||||||||||||| ||||||||||| || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggg 69 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 70 gagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 27 acctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 86 |||||||||||||||||||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagagacgatgaagggcgtggaaaccgacgaaacgcttcggggagctgg 68 Query: 87 aaataagcatagatccggagattcccaaataggtcaacct 126 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 69 aaacaagcaatgatccggagattcccgaatagggcaacct 108
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 171496 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 171437 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171436 gagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 121430 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 121489 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121490 gagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 101 bits (51), Expect = 2e-18 Identities = 100/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | ||| ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggtcgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 21 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 80 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 81 gagctggaagcaagctctgatccggagattcccgaatagggcaacct 127
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 99.6 bits (50), Expect = 8e-18 Identities = 98/114 (85%) Strand = Plus / Minus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| ||||||||||||||||| |||||||||| |||||||||| || |||||||| | Sbjct: 115660 ggcttacggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacg 115601 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || |||| || ||| || |||||| ||||||||||| ||| |||||| |||||| Sbjct: 115600 ctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacct 115547 Score = 99.6 bits (50), Expect = 8e-18 Identities = 98/114 (85%) Strand = Plus / Plus Query: 13 ggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatg 72 ||||| ||||||||||||||||| |||||||||| |||||||||| || |||||||| | Sbjct: 86328 ggcttacggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacg 86387 Query: 73 cttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || |||| || ||| || |||||| ||||||||||| ||| |||||| |||||| Sbjct: 86388 ctccgggaagctgacaagaagcattgatccggagatccccgaatagggcaacct 86441
>emb|AJ391753.1|VSA391753 Vicia sativa genomic repetitive element, clone S35 Length = 324 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/134 (85%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgt--ag 58 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 137 caaacgaggaaaggcttatggtggatacctaggcacccagagacgaggaagggcgtgtag 78 Query: 59 c-aagcgacgaaatgcttcggggagttgaaaat---aagcatagatccggagattcccaa 114 || ||||||||||||||||||||||| | | |||| ||||||| ||||||| | Sbjct: 77 ataaacgacgaaatgcttcggggagttgcgactgccaagccaagatccgaggattcccga 18 Query: 115 ataggtcaaccttt 128 |||||||||||||| Sbjct: 17 ataggtcaaccttt 4
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 97.6 bits (49), Expect = 3e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 94 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 53
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 95.6 bits (48), Expect = 1e-16 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 ||||||||||||| | |||||||| ||||||||| | || |||||| | |||||||||| Sbjct: 5655 ggatacctaggcatctagagacgaagaagggcgtgg-aaccgacgatacacttcggggag 5713 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||| ||| ||||||||||||| |||||||| |||||| |||||||||| Sbjct: 5714 ttggaaacaagcatagatccgaagattcccgaatagggcaacctttta 5761
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 95.6 bits (48), Expect = 1e-16 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 ||||||||||||| | |||||||| ||||||||| | || |||||| | |||||||||| Sbjct: 2718 ggatacctaggcatctagagacgaagaagggcgtgg-aaccgacgatacacttcggggag 2776 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||| ||| ||||||||||||| |||||||| |||||| |||||||||| Sbjct: 2777 ttggaaacaagcatagatccgaagattcccgaatagggcaacctttta 2824
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 95.6 bits (48), Expect = 1e-16 Identities = 91/104 (87%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 ||||||||||||||| |||||||| ||||||||| | || |||||||| ||||||||||| Sbjct: 24815 ggatacctaggcacctagagacgatgaagggcgtgg-aaccgacgaaacgcttcggggag 24873 Query: 83 ttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24874 ctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 95.6 bits (48), Expect = 1e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 95 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 52
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 93.7 bits (47), Expect = 5e-16 Identities = 99/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 23 ggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggggag 82 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 83 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgc 136 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc 138
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 91.7 bits (46), Expect = 2e-15 Identities = 95/110 (86%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||||||| || || ||||||| || || || ||||||||| ||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgctttggg 80 Query: 80 gagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttt 128 ||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| Sbjct: 81 gagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt 130
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 91.7 bits (46), Expect = 2e-15 Identities = 78/86 (90%), Gaps = 2/86 (2%) Strand = Plus / Minus Query: 61 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 120 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 121 caaccttttaaactgcctgctgaatc 146 |||||||| ||||| |||||||||| Sbjct: 6453 taaccttttgaactg-ctgctgaatc 6429
>emb|Y13905.1|ZMY13905 Zea mays mRNA for anionic peroxidase Length = 1248 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 399 gctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctccgt 452 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 281 gctcatccgcatcttcttccacgactgcttcccgcagggctgcgacgcgtccgt 334
>gb|AY110269.1| Zea mays CL1874_1 mRNA sequence Length = 1321 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 399 gctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctccgt 452 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 281 gctcatccgcatcttcttccacgactgcttcccgcagggctgcgacgcgtccgt 334
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 89.7 bits (45), Expect = 8e-15 Identities = 95/111 (85%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| ||||||||| | |||||||| ||||||||| | || |||||| | ||||||| Sbjct: 3 ggyggagacctaggcatctagagacgaagaagggcgtgg-aaccgacgatacacttcggg 61 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 |||||| ||| ||||||||||||| |||||||| |||||| |||||||||| Sbjct: 62 gagttggaaacaagcatagatccgaagattcccgaatagggcaacctttta 112
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||| | |||||||||||||||||| | | ||||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagagacgaggaagggcgtggttaccgacgaaatgcttcggg 82 Query: 80 gagttgaaaataagcatagatccggagat 108 |||||| ||| | || |||||||||||| Sbjct: 83 gagttggaaagaggctgagatccggagat 111
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 89.7 bits (45), Expect = 8e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 98 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatc 146 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatc 49
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||| | |||||||| ||||||||| | || | ||||||||||||| Sbjct: 122 cggtggatacctaggcatctagagacgatgaagggcgtggaaaccaacgaaatgcttcga 181 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 |||| || ||| |||| ||| ||||||||||| |||||| |||||||||| Sbjct: 182 ggagctggaaacaagctatgattcggagattcccgaatagggcaacctttta 233
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 85.7 bits (43), Expect = 1e-13 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 67 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 125 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 126 ttttaaactgc 136 ||| ||||||| Sbjct: 128 tttaaaactgc 138
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 83.8 bits (42), Expect = 5e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaa 50 |||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8116 caaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaa 8165
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 11 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 70 ||||||| |||||||||||||||| ||||| ||| ||||||||| | | |||||||| Sbjct: 191852 aaggcttatggtggatacctaggcattcagaggcgatgaagggcgtggataccgacgaaa 191911 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 |||||||||||||| ||| ||||| |||||| |||||||| |||||| ||||| | | Sbjct: 191912 cgcttcggggagttggaaacgagcattgatccgaagattcccgaatagggaaacctgtaa 191971 Query: 131 aactgc 136 |||||| Sbjct: 191972 aactgc 191977 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 11 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 70 ||||||| |||||||||||||||| ||||| ||| ||||||||| | | |||||||| Sbjct: 144930 aaggcttatggtggatacctaggcattcagaggcgatgaagggcgtggataccgacgaaa 144871 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 |||||||||||||| ||| ||||| |||||| |||||||| |||||| ||||| | | Sbjct: 144870 cgcttcggggagttggaaacgagcattgatccgaagattcccgaatagggaaacctgtaa 144811 Query: 131 aactgc 136 |||||| Sbjct: 144810 aactgc 144805
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/108 (86%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| |||||||||| ||||||||| ||||||||| | || | ||||||||||||||| Sbjct: 10 ggyggagacctaggcactcagagacgaagaagggcgtggaaaccaacgaaatgcttcggg 69 Query: 80 gagttgaaaataagc-atagatccggagattcccaaataggtcaacct 126 ||| || ||| |||| ||| |||||||||||||| |||||| |||||| Sbjct: 70 gagctggaaacaagctata-atccggagattcccgaatagggcaacct 116
>gb|AY768371.1| Leptolyngbya sp. PCC 73110 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 687 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 ||||||||||||||||| ||||| ||| ||||| ||| | | |||||| |||||||||| Sbjct: 511 ggtggatacctaggcacacagaggcgatgaaggacgtgacgaccgacgatatgcttcggg 570 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttt 128 ||| || || ||||||| |||||| ||||| || |||||| |||||||| Sbjct: 571 gagctggaagtaagcattgatccgaagatttccgaatagggcaaccttt 619
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 81.8 bits (41), Expect = 2e-12 Identities = 90/107 (84%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| |||||||||||||||||||| |||||||| || | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgatgaagggcgcagataccggcgaaacgcttcggg 62 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || ||||||||||||| |||| ||| |||||| |||||| Sbjct: 63 gagctggcaacaagcatagatccgaagatccccgaatagggcaacct 109
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 81.8 bits (41), Expect = 2e-12 Identities = 90/107 (84%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| |||||||||||||||||||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtggaaaccgacgaaacgcttcggg 69 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 70 aagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 81.8 bits (41), Expect = 2e-12 Identities = 90/107 (84%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| ||||||||| | ||| |||| ||||||||| || ||||||||||||||||| Sbjct: 3 ggyggagacctaggcatcaagatacgatgaagggcgttataaccgacgaaatgcttcggg 62 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || |||||||| | || |||||||||||| |||||| |||||| Sbjct: 63 gagctggaaataagctttgagccggagattcccgaatagggcaacct 109
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 81.8 bits (41), Expect = 2e-12 Identities = 90/107 (84%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| ||||||||| |||||||||| |||||||||| || |||||||| ||| |||| Sbjct: 10 ggyggagacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccggg 69 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 || ||| || |||||| ||||||||||| ||| |||||| |||||| Sbjct: 70 aagctgacaagaagcattgatccggagatccccgaatagggcaacct 116
>dbj|AP006418.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23A02, TM0306, complete sequence Length = 62713 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 1 caaaagaggaaaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagca 60 |||| |||||||||||| |||||||||||||||||| ||||||||||| |||||||| | Sbjct: 33766 caaacgaggaaaggcttatggtggatacctaggcacctagagacgaggaggggcgtagta 33707 Query: 61 agcga 65 ||||| Sbjct: 33706 agcga 33702
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||| |||||||||| ||||||||| |||||||| || | || ||| | ||||||| Sbjct: 20 cggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 |||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||| |||| ||| |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctagaaacgatgaagggcgtagaaagcgacgaaatgcttcgg 484
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 |||||||||||||||||| |||||||| ||||||||| | | |||||| | ||| |||| Sbjct: 10 ggtggatacctaggcacctagagacgaagaagggcgtcactaccgacgatacgctccggg 69 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || || ||||| | ||||||||||||||| ||| || |||||| Sbjct: 70 gagctggaagtaagcttcgatccggagattcccgaatggggcaacct 116
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 |||||||||||||||||| |||| ||| ||||||||| | || | |||||||||||||| Sbjct: 1883 cggtggatacctaggcacttagagtcgatgaagggcgtggaaaccaacgaaatgcttcgg 1942 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 125 |||| || ||| |||| ||||||||||||||| ||| || ||||| Sbjct: 1943 ggagctggaaacaagctacgatccggagattcccgaatggggcaacc 1989
>emb|X05693.1|CHCERR23 Chlorella ellipsoidea plastid DNA for 23S RNA upstream region with tRNA-Ala and tRNA-Ser (part.) genes Length = 1387 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 19 cggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 78 ||||||||||||||||| | |||||||| ||||||||| | || | ||||||||||||| Sbjct: 1281 cggtggatacctaggcatctagagacgatgaagggcgtggaaaccaacgaaatgcttcga 1340 Query: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaacc 125 |||| || ||| |||| ||| ||||||||||| |||||| ||||| Sbjct: 1341 ggagctggaaacaagctatgattcggagattcccgaatagggcaacc 1387
>ref|NM_189377.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgctc 459 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 234 cttccacgactgcttcgtgcagggctgcgacgcctccgtgctgctc 279
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Minus Query: 11 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 70 ||||||| ||||||| |||||||||| ||||||||| |||||||| || | || ||| | Sbjct: 156288 aaggcttacggtggagacctaggcactcagagacgatgaagggcgcagataccggcgata 156229 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| ||| Sbjct: 156228 cgcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctctta 156169 Query: 131 aa 132 || Sbjct: 156168 aa 156167 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 11 aaggcttgcggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaa 70 ||||||| ||||||| |||||||||| ||||||||| |||||||| || | || ||| | Sbjct: 77604 aaggcttacggtggagacctaggcactcagagacgatgaagggcgcagataccggcgata 77663 Query: 71 tgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctttta 130 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| ||| Sbjct: 77664 cgcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctctta 77723 Query: 131 aa 132 || Sbjct: 77724 aa 77725
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgctc 459 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 97930 cttccacgactgcttcgtgcagggctgcgacgcctccgtgctgctc 97975 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 395 cggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctccgtgc 454 ||||||| ||||| ||| |||||||||||||||| |||||||||||||||||| | | Sbjct: 93622 cggcgctgatccggctccacttccacgactgcttcgtccagggctgcgacgcctccatcc 93681 Query: 455 tgctc 459 ||||| Sbjct: 93682 tgctc 93686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 395 cggcgctcatccgcatcctcttccacgactgcttcccgcagggctgcgacgcctcc 450 ||||||| ||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 81535 cggcgctgatccggctccacttccacgactgcttcgtccagggctgcgacgcctcc 81590
>tpe|BN000552.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx23 gene for class III peroxidase 23 precursor, exons 1-2 Length = 1459 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgctc 459 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 234 cttccacgactgcttcgtgcagggctgcgacgcctccgtgctgctc 279
>gb|M73234.1|BLYPRX5A Hordeum vulgare peroxidase BP 1 (Prx5) mRNA, complete cds Length = 1177 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgctc 459 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 246 cttccacgactgcttcgtgcagggctgcgacgcctccgtgctgctc 291
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 73.8 bits (37), Expect = 4e-10 Identities = 89/107 (83%) Strand = Plus / Plus Query: 20 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 || ||| |||||||||| ||||||||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcactcagagacgatgaagggcgtggtaaccgacgaaacgcttcggg 69 Query: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 126 ||| || | | ||| | |||||| |||||||| |||||| |||||| Sbjct: 70 gagctggatacgagctttgatccgaagattcccgaatagggcaacct 116
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 414 cttccacgactgcttcccgcagggctgcgacgcctccgtgctgct 458 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 310 cttccacgactgcttcgtgcagggctgcgacgcctccgtgctgct 354
>gb|AF525425.1| Triticum aestivum peroxidase 1 (WSP1) mRNA, complete cds Length = 1196 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 404 tccgcatcctcttccacgactgcttcccgcagggctgcgacgcctccgtgct 455 ||||| ||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 235 tccgcctccacttccacgactgcttcgtgcagggctgcgacgcctccgtgct 286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,222,358 Number of Sequences: 3902068 Number of extensions: 3222358 Number of successful extensions: 59636 Number of sequences better than 10.0: 632 Number of HSP's better than 10.0 without gapping: 647 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 57241 Number of HSP's gapped (non-prelim): 2314 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
