ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet04f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RK5_ORYSA (Q9ZST0) 50S ribosomal protein L5, chloroplast precurs... 94 9e-20
2RK5_ARATH (O04603) 50S ribosomal protein L5, chloroplast precursor 51 9e-07
3RK5_SPIOL (P82192) 50S ribosomal protein L5, chloroplast 44 1e-04
4RL5_ANASP (Q8YPJ1) 50S ribosomal protein L5 38 0.007
5RL5_SYNY3 (P73308) 50S ribosomal protein L5 37 0.013
6RL5_SYNP6 (O24701) 50S ribosomal protein L5 34 0.082
7RL5_BRAJA (Q89J96) 50S ribosomal protein L5 34 0.11
8RL5_MYCGA (O52344) 50S ribosomal protein L5 33 0.14
9RL5_RHOPA (Q6N4U5) 50S ribosomal protein L5 (RRP-L5) 33 0.18
10RK5_CHAGL (Q8M9V3) Chloroplast 50S ribosomal protein L5 33 0.24
11RK5_ASTLO (P14757) Plastid 50S ribosomal protein L5 32 0.41
12RK5_GUITH (O46906) Chloroplast 50S ribosomal protein L5 32 0.41
13RK5_CYAME (Q85FV1) Chloroplast 50S ribosomal protein L5 31 0.70
14RL5_THEMA (P38517) 50S ribosomal protein L5 31 0.70
15RL5_RHOBA (Q7UN08) 50S ribosomal protein L5 31 0.70
16RL5_LACLA (Q9CDX4) 50S ribosomal protein L5 31 0.70
17RK5_CYAPA (P14807) Cyanelle 50S ribosomal protein L5 31 0.91
18RL5_STRP8 (Q7CNP5) 50S ribosomal protein L5 31 0.91
19RL5_STRP6 (Q5XEC3) 50S ribosomal protein L5 31 0.91
20RL5_STRP3 (Q7CFK8) 50S ribosomal protein L5 31 0.91
21RL5_STRP1 (Q9A1W2) 50S ribosomal protein L5 31 0.91
22RL5_THETN (Q8R7W6) 50S ribosomal protein L5 30 1.2
23RL5_CLOPE (Q8XHT5) 50S ribosomal protein L5 30 1.2
24RK5_CHLRE (Q8HTL1) Chloroplast 50S ribosomal protein L5 30 1.2
25RL5_GEOSL (Q748Z9) 50S ribosomal protein L5 30 1.6
26RL5_STRMU (Q8DS25) 50S ribosomal protein L5 30 1.6
27RL5_LACPL (Q88XX4) 50S ribosomal protein L5 30 1.6
28RL5_SYNEL (Q8DMM0) 50S ribosomal protein L5 30 2.0
29RL5_GLOVI (Q7NEG4) 50S ribosomal protein L5 30 2.0
30RL5_STRA5 (Q8E2C2) 50S ribosomal protein L5 30 2.0
31RL5_STRA3 (Q8E7S9) 50S ribosomal protein L5 30 2.0
32RL5_CLOTE (Q890P8) 50S ribosomal protein L5 30 2.0
33RL5_CAUCR (Q9A8U1) 50S ribosomal protein L5 30 2.0
34RL5_BACHD (Q9Z9K2) 50S ribosomal protein L5 29 2.6
35RK5_MESVI (Q9MUU5) Chloroplast 50S ribosomal protein L5 29 2.6
36RL5_XANCP (Q8PC39) 50S ribosomal protein L5 29 2.6
37RL5_XANAC (Q8PNR4) 50S ribosomal protein L5 29 2.6
38RK5_EUGGR (P21510) Chloroplast 50S ribosomal protein L5 29 3.5
39RL5_STRR6 (Q8CWV4) 50S ribosomal protein L5 29 3.5
40RL5_STRPN (Q97SV1) 50S ribosomal protein L5 29 3.5
41RL5_PORGI (Q7MTM5) 50S ribosomal protein L5 28 4.5
42RK5_NEPOL (Q9TL23) Chloroplast 50S ribosomal protein L5 28 4.5
43RL5_TREDE (Q73PM0) 50S ribosomal protein L5 28 4.5
44RL5_DESVH (Q72CG8) 50S ribosomal protein L5 28 5.9
45RK5_GRATL (Q6B8W5) Chloroplast 50S ribosomal protein L5 28 5.9
46RL5_BIFLO (Q8G406) 50S ribosomal protein L5 28 5.9
47RL5_CLOAB (Q97EJ0) 50S ribosomal protein L5 28 5.9 
>RK5_ORYSA (Q9ZST0) 50S ribosomal protein L5, chloroplast precursor (Fragment)|
          Length = 280

 Score = 94.0 bits (232), Expect = 9e-20
 Identities = 54/100 (54%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = +1

Query: 13  AATAVTLXXXXXXXXXXXXXXXRRCLQLL-RSPPPRRAIRVXXXXXXXXXXXXXX--XXX 183
           A TAVTL                R ++LL RSPPPRRA+RV                   
Sbjct: 3   AVTAVTLPSSPAPFPVTTTASSSRNVRLLLRSPPPRRALRVAASAAADAPPKPAPPPTSP 62

Query: 184 SGIILVDPAEAQKVHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           SGI+LVDP EAQKVHRLK VYD KVVP+ITEEFGYTNVHQ
Sbjct: 63  SGIVLVDPTEAQKVHRLKAVYDQKVVPLITEEFGYTNVHQ 102
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>RK5_ARATH (O04603) 50S ribosomal protein L5, chloroplast precursor|
          Length = 262

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 25/67 (37%), Positives = 36/67 (53%)
 Frame = +1

Query: 103 SPPPRRAIRVXXXXXXXXXXXXXXXXXSGIILVDPAEAQKVHRLKTVYDTKVVPIITEEF 282
           SPP R  ++V                 SG +LV+ +EA+K  RLKT Y  +++P + EEF
Sbjct: 31  SPPLRNVVKVSA---------------SGTVLVEKSEAEKTQRLKTAYLERIIPALKEEF 75

Query: 283 GYTNVHQ 303
            Y N+HQ
Sbjct: 76  KYVNIHQ 82
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>RK5_SPIOL (P82192) 50S ribosomal protein L5, chloroplast|
          Length = 220

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 27/35 (77%)
 Frame = +1

Query: 193 ILVDPAEAQKVHRLKTVYDTKVVPIITEEFGYTNV 297
           + VD AEA+ ++RLKT Y  K+VP++ EEF Y+N+
Sbjct: 6   VFVDKAEAETINRLKTNYIEKMVPLLKEEFSYSNI 40
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>RL5_ANASP (Q8YPJ1) 50S ribosomal protein L5|
          Length = 182

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLKT+Y   +VP +T++F YTNVHQ
Sbjct: 5   RLKTLYQETIVPKLTQQFQYTNVHQ 29
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>RL5_SYNY3 (P73308) 50S ribosomal protein L5|
          Length = 180

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLKT+Y   ++P + EEFGY N+HQ
Sbjct: 4   RLKTLYQETILPKLQEEFGYKNIHQ 28
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>RL5_SYNP6 (O24701) 50S ribosomal protein L5|
          Length = 179

 Score = 34.3 bits (77), Expect = 0.082
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 232 LKTVYDTKVVPIITEEFGYTNVHQ 303
           LKT Y   +VP + +EFGYTN+HQ
Sbjct: 3   LKTKYRDIIVPKLMKEFGYTNIHQ 26
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>RL5_BRAJA (Q89J96) 50S ribosomal protein L5|
          Length = 185

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 208 AEAQKVHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           AEA    RL+  YD K+   +TE+FGY NV Q
Sbjct: 2   AEAAYTPRLRAEYDAKIRTAMTEKFGYENVMQ 33
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>RL5_MYCGA (O52344) 50S ribosomal protein L5|
          Length = 185

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +1

Query: 232 LKTVYDTKVVPIITEEFGYTNVHQ 303
           LKT Y TK+VP++ +EFG+++V Q
Sbjct: 3   LKTKYKTKIVPLLQKEFGFSSVMQ 26
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>RL5_RHOPA (Q6N4U5) 50S ribosomal protein L5 (RRP-L5)|
          Length = 185

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 208 AEAQKVHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           AE   V RL+T YD  +   +TE+FGY NV Q
Sbjct: 2   AETAYVPRLRTEYDRHIRTQLTEKFGYANVMQ 33
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>RK5_CHAGL (Q8M9V3) Chloroplast 50S ribosomal protein L5|
          Length = 186

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           V RLK++Y   V+P + EE  Y NVHQ
Sbjct: 2   VQRLKSIYLNNVIPKLNEEAKYKNVHQ 28
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>RK5_ASTLO (P14757) Plastid 50S ribosomal protein L5|
          Length = 179

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTN 294
           + +LK++Y TKV PI+  EF YTN
Sbjct: 1   MQKLKSIYITKVCPILVNEFLYTN 24
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>RK5_GUITH (O46906) Chloroplast 50S ribosomal protein L5|
          Length = 181

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 232 LKTVYDTKVVPIITEEFGYTNVHQ 303
           LK +Y   V+P + E+F YTN+HQ
Sbjct: 5   LKEIYYQDVIPGLIEQFNYTNIHQ 28
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>RK5_CYAME (Q85FV1) Chloroplast 50S ribosomal protein L5|
          Length = 177

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 238 TVYDTKVVPIITEEFGYTNVHQ 303
           T Y TKV+P + +++ Y+NVHQ
Sbjct: 7   TFYKTKVIPQLQQKYSYSNVHQ 28
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>RL5_THEMA (P38517) 50S ribosomal protein L5|
          Length = 184

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 232 LKTVYDTKVVPIITEEFGYTNVHQ 303
           LK  Y+ ++VP + +EF Y N+HQ
Sbjct: 8   LKDQYEKEIVPALMKEFNYKNIHQ 31
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>RL5_RHOBA (Q7UN08) 50S ribosomal protein L5|
          Length = 196

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 205 PAEAQKVHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           P  +  + R++  YD  V   +TE +GY NVHQ
Sbjct: 2   PNMSSNIPRMQQRYDESVRAALTETYGYKNVHQ 34
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>RL5_LACLA (Q9CDX4) 50S ribosomal protein L5|
          Length = 180

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +VVP +TE+F YT++
Sbjct: 3   NRLKEKYTNEVVPALTEQFNYTSI 26
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>RK5_CYAPA (P14807) Cyanelle 50S ribosomal protein L5|
          Length = 181

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           V RLKTVY+ +V+  +   F Y N+H+
Sbjct: 2   VQRLKTVYEQEVIKQLMTRFQYKNIHE 28
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>RL5_STRP8 (Q7CNP5) 50S ribosomal protein L5|
          Length = 180

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +V+P +TE+F YT+V
Sbjct: 3   NRLKEKYTNEVIPALTEKFNYTSV 26
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>RL5_STRP6 (Q5XEC3) 50S ribosomal protein L5|
          Length = 180

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +V+P +TE+F YT+V
Sbjct: 3   NRLKEKYTNEVIPALTEKFNYTSV 26
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>RL5_STRP3 (Q7CFK8) 50S ribosomal protein L5|
          Length = 180

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +V+P +TE+F YT+V
Sbjct: 3   NRLKEKYTNEVIPALTEKFNYTSV 26
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>RL5_STRP1 (Q9A1W2) 50S ribosomal protein L5|
          Length = 180

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +V+P +TE+F YT+V
Sbjct: 3   NRLKEKYTNEVIPALTEKFNYTSV 26
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>RL5_THETN (Q8R7W6) 50S ribosomal protein L5|
          Length = 179

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RL+  Y+ +VVP + E FGY N+ Q
Sbjct: 3   RLREKYEKEVVPALMERFGYKNIMQ 27
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>RL5_CLOPE (Q8XHT5) 50S ribosomal protein L5|
          Length = 179

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           ++RL+  Y+ +VVP + E+FGY N+ Q
Sbjct: 1   MNRLQERYEKEVVPAMMEKFGYKNIMQ 27
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>RK5_CHLRE (Q8HTL1) Chloroplast 50S ribosomal protein L5|
          Length = 187

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLK +Y   +VP +T  F Y+N+H+
Sbjct: 12  RLKNLYTKTIVPKLTTNFNYSNMHE 36
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>RL5_GEOSL (Q748Z9) 50S ribosomal protein L5|
          Length = 179

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLK +Y  ++V  +T++FGY+NV Q
Sbjct: 3   RLKELYHKEIVEQLTKDFGYSNVMQ 27
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>RL5_STRMU (Q8DS25) 50S ribosomal protein L5|
          Length = 180

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +VVP +TE+F YT+V
Sbjct: 3   NRLKEKYLNEVVPALTEKFNYTSV 26
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>RL5_LACPL (Q88XX4) 50S ribosomal protein L5|
          Length = 180

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNVHQ 303
           +RLK  Y+ ++VP + ++F YT+V Q
Sbjct: 3   NRLKAQYEKEIVPALVDKFNYTSVMQ 28
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>RL5_SYNEL (Q8DMM0) 50S ribosomal protein L5|
          Length = 181

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLK  Y+  VVP + ++F Y N+HQ
Sbjct: 4   RLKDHYNKTVVPQLMQQFQYKNIHQ 28
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>RL5_GLOVI (Q7NEG4) 50S ribosomal protein L5|
          Length = 182

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           R+K  Y+ +VVP + E+F YTN+ Q
Sbjct: 6   RMKDKYNREVVPRLQEQFNYTNLMQ 30
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>RL5_STRA5 (Q8E2C2) 50S ribosomal protein L5|
          Length = 180

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +VVP +TE+F Y++V
Sbjct: 3   NRLKEKYTNEVVPALTEKFNYSSV 26
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>RL5_STRA3 (Q8E7S9) 50S ribosomal protein L5|
          Length = 180

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +VVP +TE+F Y++V
Sbjct: 3   NRLKEKYTNEVVPALTEKFNYSSV 26
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>RL5_CLOTE (Q890P8) 50S ribosomal protein L5|
          Length = 180

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNV 297
           V RL+  Y+ +V+P + E+FGY N+
Sbjct: 2   VPRLQEKYEKEVIPALIEKFGYKNI 26
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>RL5_CAUCR (Q9A8U1) 50S ribosomal protein L5|
          Length = 185

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLKTVY  ++   + E+FGYTN  Q
Sbjct: 9   RLKTVYRERIRAAMKEQFGYTNEMQ 33
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>RL5_BACHD (Q9Z9K2) 50S ribosomal protein L5|
          Length = 179

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNV 297
           ++RLK  Y  ++VP +TE+F Y++V
Sbjct: 1   MNRLKEKYQKEIVPSLTEKFNYSSV 25
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>RK5_MESVI (Q9MUU5) Chloroplast 50S ribosomal protein L5|
          Length = 184

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           V RLKT+Y    V  + E FGY N HQ
Sbjct: 2   VQRLKTLYLESAVLKLQETFGYKNPHQ 28
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>RL5_XANCP (Q8PC39) 50S ribosomal protein L5|
          Length = 180

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTN 294
           RL+  Y   VVP + +EFGYTN
Sbjct: 4   RLEKFYKENVVPALMKEFGYTN 25
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>RL5_XANAC (Q8PNR4) 50S ribosomal protein L5|
          Length = 180

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTN 294
           RL+  Y   VVP + +EFGYTN
Sbjct: 4   RLEKFYKDNVVPALMKEFGYTN 25
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>RK5_EUGGR (P21510) Chloroplast 50S ribosomal protein L5|
          Length = 179

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           + RLK+ Y   ++P + EEFGY N ++
Sbjct: 1   MQRLKSFYLETIIPKLKEEFGYVNSYR 27
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>RL5_STRR6 (Q8CWV4) 50S ribosomal protein L5|
          Length = 180

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +VVP +TE+F Y++V
Sbjct: 3   NRLKEKYLNEVVPALTEQFNYSSV 26
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>RL5_STRPN (Q97SV1) 50S ribosomal protein L5|
          Length = 180

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 226 HRLKTVYDTKVVPIITEEFGYTNV 297
           +RLK  Y  +VVP +TE+F Y++V
Sbjct: 3   NRLKEKYLNEVVPALTEQFNYSSV 26
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>RL5_PORGI (Q7MTM5) 50S ribosomal protein L5|
          Length = 186

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 232 LKTVYDTKVVPIITEEFGYTNVHQ 303
           LK  Y  ++VP + ++FGYT+V Q
Sbjct: 7   LKKDYQERIVPALMKQFGYTSVMQ 30
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>RK5_NEPOL (Q9TL23) Chloroplast 50S ribosomal protein L5|
          Length = 184

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RLKT Y   VVP + ++F + N+H+
Sbjct: 4   RLKTFYLNSVVPKLRQQFHHRNIHE 28
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>RL5_TREDE (Q73PM0) 50S ribosomal protein L5|
          Length = 183

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           V RLK VY  +++P + +EF Y++V Q
Sbjct: 5   VPRLKKVYTEQIMPELKKEFNYSSVMQ 31
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>RL5_DESVH (Q72CG8) 50S ribosomal protein L5|
          Length = 179

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 229 RLKTVYDTKVVPIITEEFGYTNVHQ 303
           RL+ +Y  KVVP++ +EF Y +  Q
Sbjct: 3   RLENIYREKVVPVLQKEFNYDSSMQ 27
to top
>RK5_GRATL (Q6B8W5) Chloroplast 50S ribosomal protein L5|
          Length = 179

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 232 LKTVYDTKVVPIITEEFGYTNVHQ 303
           LKT+Y+ K+   + ++F Y N+HQ
Sbjct: 5   LKTLYNNKICKDLQKKFRYKNIHQ 28
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>RL5_BIFLO (Q8G406) 50S ribosomal protein L5|
          Length = 190

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 211 EAQKVHRLKTVYDTKVVPIITEEFGYTNVHQ 303
           EA    RLK  Y+ +++P + +EF Y+N  Q
Sbjct: 7   EAPATPRLKVKYNEQIIPELEKEFKYSNPMQ 37
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>RL5_CLOAB (Q97EJ0) 50S ribosomal protein L5|
          Length = 180

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 223 VHRLKTVYDTKVVPIITEEFGYTNV 297
           V RLK  Y+ +V+P + E+F Y N+
Sbjct: 2   VPRLKEKYEKEVIPALMEKFQYKNI 26


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,194,547
Number of Sequences: 219361
Number of extensions: 219185
Number of successful extensions: 990
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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