>HXC11_HUMAN (O43248) Homeobox protein Hox-C11|
          Length = 304

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = -1

Query: 295 GSKSNVAMNAWLPQASYPCGNFSDTSSFKLRRSKGSIGHAFTVRIRNFTSDYEIRMPPTV 116
           G + + A N +LP  +Y    FS  SSF  +              R  +  Y  ++PP  
Sbjct: 23  GERGSCASNLYLPSCTYYMPEFSTVSSFLPQAPS-----------RQISYPYSAQVPPVR 71

Query: 115 PINHYSDPEGQ-HNRTGIL*CY 53
            +++  +P G+ H+R     CY
Sbjct: 72  EVSYGLEPSGKWHHRNSYSSCY 93

>AMA1_PLAFH (P50491) Apical membrane antigen 1 precursor (Merozoite surface|
           antigen)
          Length = 622

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 234 TFLTPLASNSEDLKDR*ATLSRFVFVISPLTM 139
           TFLTP+A+ ++DLKD          +ISP+T+
Sbjct: 164 TFLTPVATENQDLKDGGFAFPPTEPLISPMTL 195

>RFPL2_HUMAN (O75678) Ret finger protein-like 2 (RING finger protein 79)|
          Length = 378

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 335 ILSCCNDRKSRHRRIKKQRRYERLAA 258
           +L CC+   SR  +I++ R+ ERLA+
Sbjct: 137 LLCCCSSMVSRKNKIRRNRQLERLAS 162

>Y114_CHLMU (Q9PLI5) Hypothetical protein TC0114|
          Length = 122

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = -3

Query: 317 DRKSRHRRIKKQRRYERLAATSQLS 243
           D  SRHR  K  RRYE L A S LS
Sbjct: 79  DAMSRHRGAKPPRRYELLVAISLLS 103

>WBS14_CAEEL (P41846) WBSCR14 protein homolog (Mlx interactor)|
          Length = 1009

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -2

Query: 174 SRFVFVISPLTMKYECPRLSLLIITPIPKANTIGPES 64
           SR  ++ SPLT   + P   L + TP+P AN  GP++
Sbjct: 534 SRSWWLDSPLTASVQSP---LSVATPLPLANQTGPQT 567

>EXOY_RHISN (P14186) Exopolysaccharide production protein exoY|
          Length = 226

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 140 IVRGEITNTNRESVAYRSFRSSEFEARGVRKVTTGITGLWQPSVHSDVAF 289
           I+RGE++      V        +  A    +   G+TGLWQ S  +DV++
Sbjct: 140 IIRGEMSIVGPRPVVEDELELYDSAAEFYLRSRPGLTGLWQISGRNDVSY 189

>SCP_NERDI (P04571) Sarcoplasmic calcium-binding protein (SCP)|
          Length = 174

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 149 GEITNTNRESVAYRSFRSSEFEARGVRKVTTGITGLW 259
           G IT  + ES+A R  + SE +A   + +   +TG+W
Sbjct: 21  GAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVW 57

>VATH_YEAST (P41807) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H|
           subunit) (Vacuolar proton pump H subunit) (V-ATPase 54
           kDa subunit)
          Length = 478

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 341 SIILSCCNDRKSRHRRIKKQ 282
           SIIL CC+ R  +H+++ KQ
Sbjct: 292 SIILQCCSTRVKQHKKVIKQ 311

>HEMH_PROFR (P72183) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 352

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 155 ITNTNRESVAYRSFRSSEFEARGVRKVTT 241
           I N NR S+ Y     ++ ++RG+R+V T
Sbjct: 78  IANANRHSMPYMDQALADLQSRGIRRVLT 106

>NIR_ARATH (Q39161) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1) (NiR)
          Length = 586

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 159 RIRTVKAWPIDPLDLRSLKLEVSEKLPQG*LACGS 263
           R +T   W ID L +   + EV +++P G L  GS
Sbjct: 328 RQKTRMMWLIDELGVEGFRTEVEKRMPNGKLERGS 362

>EXOY_RHIME (Q02731) Exopolysaccharide production protein exoY|
          Length = 226

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 140 IVRGEITNTNRESVAYRSFRSSEFEARGVRKVTTGITGLWQPSVHSDVAF 289
           I+RGE++      V        +  A    +   G+TGLWQ S  +DV++
Sbjct: 140 IIRGEMSVVGPRPVVEDELELYDSAAVFYLRSRPGLTGLWQISGRNDVSY 189

>ATR_ASHGO (Q75DB8) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase MEC1) (Mitosis entry
           checkpoint protein 1) (ATR homolog)
          Length = 2324

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
 Frame = -1

Query: 271 NAWLPQASYPCGN---FSDTSSFKL------RRSKGSIGHAFTVRIR-NFTSDYEIRMPP 122
           N WLP+ S         SD+ +FKL      R    S G A  + I     S +    PP
Sbjct: 444 NLWLPRESIDPSRPEAASDSLAFKLLVGYYLREQLESSGEALVIGILITLRSIFTHFQPP 503

Query: 121 TVPINHYSDPEGQH 80
            +  NHY D   +H
Sbjct: 504 KLVENHYGDMVDEH 517


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,477,008
Number of Sequences: 219361
Number of extensions: 937278
Number of successful extensions: 1867
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)