>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 799

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
 Frame = +1

Query: 4   PAPPLH*KLPIFPVPTRRLPPLPG------DD*VESPPATTMCG-GAILKDLKVPAVTRK 162
           P PP H   P+ P P   +P +P          V  P A    G G  + D++  AV   
Sbjct: 330 PPPPAHD--PVVPAPPAHVPAVPAPVGAPDGGPVRLPGAAVPIGPGPRVADMRAAAVAAP 387

Query: 163 VTEAALWPEKKKPRQADGGA 222
             E+AL     +PR    GA
Sbjct: 388 PPESALAASWSRPRPGVNGA 407

>AP23_ARATH (P42736) AP2 domain transcription factor RAP2.3 (Related to AP2|
           protein 3) (Cadmium-induced protein AS30)
          Length = 248

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +1

Query: 109 MCGGAILKD---LKVPAVTRKVTEAALWPE 189
           MCGGAI+ D   L   A  RK+T   LW E
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSE 30

>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1    TPAPPLH*KLPIFPVPTRRLPPLPGDD*VESPPATTMCGGAILK-DLKVPAVTRKVTEAA 177
            TP PP    LP  P P   LPP+P      +PP       ++   D +V  +T+  + A 
Sbjct: 1585 TPGPPH--PLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAP 1642

Query: 178  LWPEKKKP 201
              P    P
Sbjct: 1643 GDPHPPGP 1650

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 25/77 (32%), Positives = 29/77 (37%)
 Frame = +1

Query: 4   PAPPLH*KLPIFPVPTRRLPPLPGDD*VESPPATTMCGGAILKDLKVPAVTRKVTEAALW 183
           PAPP   K  + P    R PP       E+P            DL  P   RK T     
Sbjct: 797 PAPPQKAKRSVPPASPARAPPA-----TETPGPEKAA-----TDLPAPETPRKKTPIQK- 845

Query: 184 PEKKKPRQADGGARRLG 234
           P +KK R+A G   R G
Sbjct: 846 PPRKKSREAAGELGRAG 862


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,443,438
Number of Sequences: 219361
Number of extensions: 355729
Number of successful extensions: 1018
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)