>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)|
          Length = 427

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 25/91 (27%), Positives = 34/91 (37%)
 Frame = -2

Query: 364 YSPRNPKTLISHKVPAESYKQHPPIPGRHRLWLRLGRYLIVFEPPTFVLD**KHPWQMLS 185
           +SP  PK    +K P    K + P P  H        Y+    PP         P +  S
Sbjct: 331 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP---------PVKHYS 381

Query: 184 QLFVFHKSKNFTSDYEIRMPPTVPINHYSDP 92
              V+H        Y  + PP  P++HYS P
Sbjct: 382 PPPVYHSPPPPKEKYVYKSPPPPPVHHYSPP 412

>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore|
           domain potassium channel Ork1)
          Length = 1001

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 310 RTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 411
           R PP P+E + SL SGG  +  +  +  DG  PP
Sbjct: 599 RGPPPPFESNGSLASGGGGLTNMGFQMEDGATPP 632

>AKT6_ARATH (Q8GXE6) Potassium channel AKT6 (Shaker pollen inward rectifier|
           K(+) channel) (Potassium channel SPIK)
          Length = 888

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +1

Query: 205 VFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKSLGSGGSMV 369
           V ++Q+RKL   R S   ++S  N AD G      R+P  P       G GGSM+
Sbjct: 773 VVVSQKRKLNNFRNSLFGIISAANSADDGGE--VPRSPAVP-------GGGGSMI 818

>NEU1_CATCO (P15210) Isoticin-neurophysin IT 1 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 1]
          Length = 154

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 189 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 305
           S+C  C+  S   +GG + I+  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAIQDSPSRQCMSCGPGDRGRC 53

>APE1_AERPE (O73942) Homing endonuclease I-ApeI (EC 3.1.-.-) (rRNA|
           intron-encoded homing endonuclease 1)
          Length = 222

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 334 KSKSLGS--GGSMVARLKLKGIDGRAPPGVEP 423
           KSK L    G  +    KLKGI G AP GVEP
Sbjct: 189 KSKKLNELLGRPLPGPSKLKGIGGGAPQGVEP 220

>NEU2_CATCO (P15211) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 2]
          Length = 148

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 189 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 305
           S+C  C+  S   +GG + ++  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAVQDLPSRQCMSCGPGDRGRC 53

>RGYR_SULSH (P74759) Reverse gyrase [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1166

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 134 YFIVRGEILGFMKDEQLRKHLPRMFSLIKNE 226
           + I++GE + + K EQLR+ L    SL+K++
Sbjct: 439 FSIIKGETINYQKLEQLRQELLYYISLVKDK 469

>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS|
           box-containing WD protein SWiP-1)
          Length = 421

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 202 PWQMLSQLFVFHKSKNFTSDYEIRMP 125
           PW    Q F+ H +KN T+   +R+P
Sbjct: 62  PWSQCLQNFLLHGTKNVTNSSSLRLP 87

>KLF4_HUMAN (O43474) Krueppel-like factor 4 (Epithelial zinc-finger protein|
           EZF) (Gut-enriched krueppel-like factor)
          Length = 470

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 12/103 (11%)
 Frame = -2

Query: 367 PYSPRNPKTLISHKVPAESYKQH----PPIPGRHRLWLR---LGRYLIVFEPPTFVLD** 209
           PY+   P+T    K  A S   H    PP+   HR       LGR L     PT  L+  
Sbjct: 256 PYNGGPPRTCPKIKQEAVSSCTHLGAGPPLSNGHRPAAHDFPLGRQLPSRTTPTLGLEEV 315

Query: 208 K-----HPWQMLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSD 95
                 HP   L   F  H   N+ S    +M P VP  HY +
Sbjct: 316 LSSRDCHPALPLPPGFHPHPGPNYPSFLPDQMQPQVPPLHYQE 358

>XPO1_RAT (Q80U96) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein|
           homolog)
          Length = 1071

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +2

Query: 128 HSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESW 232
           H+++   G ++G   D+ +++HL   + L+ N+ W
Sbjct: 631 HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVW 665

>XPO1_MOUSE (Q6P5F9) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein|
           homolog)
          Length = 1071

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +2

Query: 128 HSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESW 232
           H+++   G ++G   D+ +++HL   + L+ N+ W
Sbjct: 631 HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVW 665

>XPO1_HUMAN (O14980) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein|
           homolog)
          Length = 1071

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +2

Query: 128 HSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESW 232
           H+++   G ++G   D+ +++HL   + L+ N+ W
Sbjct: 631 HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVW 665


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,384,957
Number of Sequences: 219361
Number of extensions: 1479054
Number of successful extensions: 3306
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3304
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)