ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet04d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103836.1| Zea mays PCO135053 mRNA sequence 92 2e-15
2ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA 88 2e-14
3gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome... 88 2e-14
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 2e-14
5gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genom... 88 2e-14
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
8dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
10emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb... 84 4e-13
11gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.33
12emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4,... 44 0.33
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
14dbj|AK071065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.33
15gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.3
16emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
17gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.3
18gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.3
19ref|XM_483328.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
20gb|DQ356948.1| Crocodilepox virus, complete genome 40 5.2
21emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in ... 40 5.2
22gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of... 40 5.2
23dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 40 5.2
24dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.2
25gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, comple... 40 5.2
26ref|XM_939144.1| PREDICTED: Homo sapiens similar to CG1550-PA (L... 40 5.2
27ref|XM_928636.1| PREDICTED: Homo sapiens similar to CG1550-PA (L... 40 5.2
28gb|DQ384280.1| Mastigamoeba balamuthi hydrolase-like protein mRN... 40 5.2
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
30gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, comp... 40 5.2
31dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.2
32dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
33dbj|AK109868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
34emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.2
35emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chro... 40 5.2 
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence
          Length = 1519

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 170 ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagccagcg 227
           ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||
Sbjct: 291 ctccggcaagaggggcttcgccgagaccatcgacctgaagctgaagctggagccagcg 348



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 319 tgaagcggtcgccgagccagagcagcgt 346
           |||||||||| |||||||||||||||||
Sbjct: 428 tgaagcggtccccgagccagagcagcgt 455
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>ref|XM_468970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 707

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                       
Query: 164 gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
           ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 74  gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 133



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 87  atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
           ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 6   atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 62



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 319 tgaagcggtcgccgagccagagcagcgtggtcaccgcgcagcc 361
           ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 229 tgaagaggtcggcgagccagagcagcgtggtcaccgcggagcc 271
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>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0069P02 map near S13580, complete sequence
          Length = 88044

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                        
Query: 164  gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
            ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 3342 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 3401



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 87   atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
            ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 3274 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 3330



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 319  tgaagcggtcgccgagccagagcagcgtggtcaccgcgcagcc 361
            ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 3497 tgaagaggtcggcgagccagagcagcgtggtcaccgcggagcc 3539
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 164      gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
                ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 24088114 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 24088055



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 87       atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
                ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 24088182 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 24088126



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 319      tgaagcggtcgccgagccagagcagcgtggtcaccgcgcagcc 361
                ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 24087959 tgaagaggtcggcgagccagagcagcgtggtcaccgcggagcc 24087917
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>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete
              sequence
          Length = 140980

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                          
Query: 164    gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
              ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 134442 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 134501



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                       
Query: 87     atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
              ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 134374 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 134430



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                         
Query: 319    tgaagcggtcgccgagccagagcagcgtggtcaccgcgcagcc 361
              ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 134597 tgaagaggtcggcgagccagagcagcgtggtcaccgcggagcc 134639
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 164      gaggagctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
                ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||
Sbjct: 24005583 gaggagctccggcaagaggggcttcgccgagaccatcgacctcaagctcaagctgcagcc 24005524



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                         
Query: 87       atggcgggcctcgggttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
                ||||| |||||||||||||| ||||||||||| ||||||||||| || |||| ||||
Sbjct: 24005651 atggctggcctcgggttcgacgagaccgagctccggctcggccttcccggcgccggc 24005595



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 319      tgaagcggtcgccgagccagagcagcgtggtcaccgcgcagcc 361
                ||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 24005428 tgaagaggtcggcgagccagagcagcgtggtcaccgcggagcc 24005386
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 170      ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
                |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 25349403 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 25349350



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                     
Query: 319      tgaagcggtcgccgagccagagcagcgtggtcaccgc 355
                |||||||||||||||||||||||||||| ||||||||
Sbjct: 25349218 tgaagcggtcgccgagccagagcagcgtcgtcaccgc 25349182



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 102      ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
                ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 25349483 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 25349442
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>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full
           insert sequence
          Length = 1545

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                 
Query: 170 ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
           |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 351 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 404



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 319 tgaagcggtcgccgagccagagcagcgtggtcaccgc 355
           |||||||||||||||||||||||||||| ||||||||
Sbjct: 536 tgaagcggtcgccgagccagagcagcgtcgtcaccgc 572



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 102 ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
           ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 271 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 312
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                      
Query: 170      ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
                |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 25277579 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 25277526



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                     
Query: 319      tgaagcggtcgccgagccagagcagcgtggtcaccgc 355
                |||||||||||||||||||||||||||| ||||||||
Sbjct: 25277394 tgaagcggtcgccgagccagagcagcgtcgtcaccgc 25277358



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 102      ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
                ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 25277659 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 25277618
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>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 170   ctccggcaagaggggctacgccgagaccatcgacctcatgctgaagctggagcc 223
             |||||| |||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 16213 ctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagcc 16160



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                  
Query: 319   tgaagcggtcgccgagccagagcagcgtggtcaccgc 355
             |||||||||||||||||||||||||||| ||||||||
Sbjct: 16028 tgaagcggtcgccgagccagagcagcgtcgtcaccgc 15992



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 102   ttcgaggagaccgagctgcggctcggcctgccaggcggcggc 143
             ||||||| ||||||||| |||||||||||||| |||||||||
Sbjct: 16293 ttcgaggcgaccgagctccggctcggcctgcccggcggcggc 16252
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 229     cggcggccgcgccgccgtccga 250
               ||||||||||||||||||||||
Sbjct: 1889967 cggcggccgcgccgccgtccga 1889988
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>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02,
              complete sequence
          Length = 167988

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 225    gcgtcggcggccgcgccgccgt 246
              ||||||||||||||||||||||
Sbjct: 156170 gcgtcggcggccgcgccgccgt 156149
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 225      gcgtcggcggccgcgccgccgt 246
                ||||||||||||||||||||||
Sbjct: 23438849 gcgtcggcggccgcgccgccgt 23438828
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>dbj|AK071065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080M03, full
           insert sequence
          Length = 1779

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 225 gcgtcggcggccgcgccgccgt 246
           ||||||||||||||||||||||
Sbjct: 164 gcgtcggcggccgcgccgccgt 143
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 229     cggcggccgcgccgccgtccg 249
               |||||||||||||||||||||
Sbjct: 2441561 cggcggccgcgccgccgtccg 2441541
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    cggcggccgcgccgccgtccg 249
              |||||||||||||||||||||
Sbjct: 621548 cggcggccgcgccgccgtccg 621528
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 267     gccgacggtgccgcggaggcgcagc 291
               ||||||||||||||| |||||||||
Sbjct: 4050208 gccgacggtgccgcgcaggcgcagc 4050184



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 110     gaccgagctgcggctcggcctgcc 133
               ||||||||| ||||||||||||||
Sbjct: 3396216 gaccgagctacggctcggcctgcc 3396193
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 225     gcgtcggcggccgcgccgccg 245
               |||||||||||||||||||||
Sbjct: 2210252 gcgtcggcggccgcgccgccg 2210272
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>ref|XM_483328.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2369

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cgtcggcggccgcgccgccg 245
           ||||||||||||||||||||
Sbjct: 487 cgtcggcggccgcgccgccg 506
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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   cgtcggcggccgcgccgccg 245
             ||||||||||||||||||||
Sbjct: 78929 cgtcggcggccgcgccgccg 78948
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>emb|CR387936.8| Zebrafish DNA sequence from clone CH211-85P6 in linkage group 8, complete
              sequence
          Length = 170195

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    accgcgcagccggaagagga 370
              ||||||||||||||||||||
Sbjct: 118995 accgcgcagccggaagagga 119014
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>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome
          Length = 12754

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  gcgtcggcggccgcgccgcc 244
            ||||||||||||||||||||
Sbjct: 1549 gcgtcggcggccgcgccgcc 1568
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    cgagctgcggctcggcctgc 132
              ||||||||||||||||||||
Sbjct: 139424 cgagctgcggctcggcctgc 139443
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 223     cagcgtcggcggccgcgccg 242
               ||||||||||||||||||||
Sbjct: 2291197 cagcgtcggcggccgcgccg 2291216
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>gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, complete sequence
          Length = 163332

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ccatcgacctcatgctgaag 215
             ||||||||||||||||||||
Sbjct: 27089 ccatcgacctcatgctgaag 27108
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>ref|XM_939144.1| PREDICTED: Homo sapiens similar to CG1550-PA (LOC650058), mRNA
          Length = 198

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ccatcgacctcatgctgaag 215
           ||||||||||||||||||||
Sbjct: 8   ccatcgacctcatgctgaag 27
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>ref|XM_928636.1| PREDICTED: Homo sapiens similar to CG1550-PA (LOC645623), mRNA
          Length = 198

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 ccatcgacctcatgctgaag 215
           ||||||||||||||||||||
Sbjct: 8   ccatcgacctcatgctgaag 27
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>gb|DQ384280.1| Mastigamoeba balamuthi hydrolase-like protein mRNA, partial cds
          Length = 420

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 133 caggcggcggcaacgaggctgagg 156
           ||||||||||| ||||||||||||
Sbjct: 335 caggcggcggcgacgaggctgagg 312
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      cgtcggcggccgcgccgccg 245
                ||||||||||||||||||||
Sbjct: 25491476 cgtcggcggccgcgccgccg 25491495
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>gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, complete sequence
          Length = 167159

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   ccatcgacctcatgctgaag 215
             ||||||||||||||||||||
Sbjct: 84213 ccatcgacctcatgctgaag 84194
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     cgtcggcggccgcgccgccg 245
               ||||||||||||||||||||
Sbjct: 2052168 cgtcggcggccgcgccgccg 2052187
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>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0711H09
          Length = 185858

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    cgtcggcggccgcgccgccg 245
              ||||||||||||||||||||
Sbjct: 122792 cgtcggcggccgcgccgccg 122811
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>dbj|AK109868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A07, full
           insert sequence
          Length = 2369

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cgtcggcggccgcgccgccg 245
           ||||||||||||||||||||
Sbjct: 487 cgtcggcggccgcgccgccg 506
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     gagctgcggctcggcctgcc 133
               ||||||||||||||||||||
Sbjct: 2848287 gagctgcggctcggcctgcc 2848268
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>emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chromosome X, complete
              sequence
          Length = 233590

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    acctcatgctgaagctggag 221
              ||||||||||||||||||||
Sbjct: 155549 acctcatgctgaagctggag 155530


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,974,463
Number of Sequences: 3902068
Number of extensions: 2974463
Number of successful extensions: 65780
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64109
Number of HSP's gapped (non-prelim): 1671
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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