ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet04d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein... 444 e-122
2gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3)... 311 5e-82
3emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific l... 307 8e-81
4emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non sp... 307 8e-81
5emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific l... 224 9e-56
6emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non sp... 224 9e-56
7ref|NM_001009072.1| Pan troglodytes sodium channel, nonvoltage-g... 44 0.19
8dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.19
9gb|AF038165.1|AF038165 Pan troglodytes epithelial sodium channel... 44 0.19
10gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatibli... 42 0.76
11gb|AF114829.1| Oryza sativa lipid transfer protein gene, complet... 42 0.76
12emb|X73563.1|SBLPBL1A Streptomyces bambergiensis plasmid genes T... 42 0.76
13gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 0.76
14gb|U29176.1|OSU29176 Oryza sativa lipid transfer protein precurs... 42 0.76
15ref|XM_475667.1| Oryza sativa (japonica cultivar-group), predic... 40 3.0
16gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
17gb|AC124012.4| Mus musculus BAC clone RP24-357P22 from chromosom... 40 3.0
18gb|BC013566.1| Homo sapiens aquaporin 3 (Gill blood group), mRNA... 40 3.0
19emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on ch... 40 3.0
20emb|X54488.1|CRCAH2 Chlamydomonas reinhardtii CAH2 gene for carb... 40 3.0
21gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 3.0
22dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 3.0
23emb|CR624600.1| full-length cDNA clone CS0DM001YP02 of Fetal liv... 40 3.0
24dbj|AK095363.1| Homo sapiens cDNA FLJ38044 fis, clone CTONG20141... 40 3.0
25emb|CR604170.1| full-length cDNA clone CS0CAP003YG18 of Thymus o... 40 3.0
26emb|CR599108.1| full-length cDNA clone CS0DI014YP03 of Placenta ... 40 3.0
27emb|CR599072.1| full-length cDNA clone CS0DK011YG17 of HeLa cell... 40 3.0
28emb|CR592288.1| full-length cDNA clone CS0DM009YA04 of Fetal liv... 40 3.0
29ref|NM_004925.3| Homo sapiens aquaporin 3 (Gill blood group) (AQ... 40 3.0
30dbj|AB001325.1| Homo sapiens AQP3 mRNA for aquaporine 3, partail... 40 3.0
31gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome... 40 3.0
32gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds 40 3.0
33gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sa... 40 3.0
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 3.0
37dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 3.0
38dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
39gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 3.0
40dbj|D50486.1|HUMA3 Homo sapiens AQP3 gene for aquaporin 3, parti... 40 3.0
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
42emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chro... 40 3.0 
>emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b
          Length = 755

 Score =  444 bits (224), Expect = e-122
 Identities = 227/228 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   caccacacccactcatctgatcacctgctagccagatagcttaaccgatggctcgtctca 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  caccacacccactcatctgatcacctgctagccagatagcttaaccgatggctcgtctca 108

                                                                       
Query: 66  acagcaaggctgtggcggccgccgttgtcctggcggcggtggtgctgatgatggccggca 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 acagcaaggctgtggcggccgccgttgtcctggcggcggtggtgctgatgatggccggca 168

                                                                       
Query: 126 gggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtgg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtgg 228

                                                           
Query: 186 cgtacgtcacggggagggcttctgctatcagcaaggagtgctgctccg 233
           ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 229 cgtacgtcacggggagggcttctgcgatcagcaaggagtgctgctccg 276
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>gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3) mRNA, complete
           cds
          Length = 555

 Score =  311 bits (157), Expect = 5e-82
 Identities = 175/181 (96%)
 Strand = Plus / Plus

                                                                       
Query: 53  atggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgctg 112
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 77  atggctcgtctcaacagcaaggctgtggcggccgccgtggtcctggcggcggtggtgctg 136

                                                                       
Query: 113 atgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagctc 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagctc 196

                                                                       
Query: 173 gcgccgtgcgtggcgtacgtcacggggagggcttctgctatcagcaaggagtgctgctcc 232
           |||||||||||||||||||| ||||||||||| ||  | |||||||||||||||||||||
Sbjct: 197 gcgccgtgcgtggcgtacgtgacggggagggcgtcctcgatcagcaaggagtgctgctcc 256

            
Query: 233 g 233
           |
Sbjct: 257 g 257
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>emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific lipid transfer
           protein precursor (ltp9.4 gene)
          Length = 771

 Score =  307 bits (155), Expect = 8e-81
 Identities = 176/183 (96%)
 Strand = Plus / Plus

                                                                       
Query: 51  cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 110
           |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 74  cgatggctcgtctcaacagcaaggctgtggtggccgccgtggtcctggcggcggtggtgc 133

                                                                       
Query: 111 tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 170
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 193

                                                                       
Query: 171 tcgcgccgtgcgtggcgtacgtcacggggagggcttctgctatcagcaaggagtgctgct 230
           |||||||||||||||||||||| ||||||||||| ||  | |||||||||||||||||||
Sbjct: 194 tcgcgccgtgcgtggcgtacgtaacggggagggcgtcctcgatcagcaaggagtgctgct 253

              
Query: 231 ccg 233
           |||
Sbjct: 254 ccg 256
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>emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non specific lipid transfer
            protein precursor, exons 1-2
          Length = 1965

 Score =  307 bits (155), Expect = 8e-81
 Identities = 176/183 (96%)
 Strand = Plus / Plus

                                                                        
Query: 51   cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 110
            |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 842  cgatggctcgtctcaacagcaaggctgtggtggccgccgtggtcctggcggcggtggtgc 901

                                                                        
Query: 111  tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902  tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 961

                                                                        
Query: 171  tcgcgccgtgcgtggcgtacgtcacggggagggcttctgctatcagcaaggagtgctgct 230
            |||||||||||||||||||||| ||||||||||| ||  | |||||||||||||||||||
Sbjct: 962  tcgcgccgtgcgtggcgtacgtgacggggagggcgtcctcgatcagcaaggagtgctgct 1021

               
Query: 231  ccg 233
            |||
Sbjct: 1022 ccg 1024
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>emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific lipid transfer
           protein precursor (ltp9.4b gene)
          Length = 776

 Score =  224 bits (113), Expect = 9e-56
 Identities = 166/183 (90%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                       
Query: 51  cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 110
           |||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||
Sbjct: 70  cgatggctcgtctcaacagcaaggctgtggtgtccgccgtggtcctggcggcggtggtgc 129

                                                                       
Query: 111 tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 170
           | |||||||||||||||||||   || |||| ||||||||||||||||||||||||||||
Sbjct: 130 taatgatggccggcagggagg---cgacggcactgtcgtgcgggcaggtggactccaagc 186

                                                                       
Query: 171 tcgcgccgtgcgtggcgtacgtcacggggagggcttctgctatcagcaaggagtgctgct 230
           |||||||||||||| ||||||| ||||||| |||  |  | |||||||||||||||||||
Sbjct: 187 tcgcgccgtgcgtgtcgtacgtgacggggaaggcgccctcgatcagcaaggagtgctgct 246

              
Query: 231 ccg 233
           |||
Sbjct: 247 ccg 249
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>emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non specific lipid transfer
            protein precursor, exons 1-2
          Length = 2000

 Score =  224 bits (113), Expect = 9e-56
 Identities = 166/183 (90%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                        
Query: 51   cgatggctcgtctcaacagcaaggctgtggcggccgccgttgtcctggcggcggtggtgc 110
            |||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||
Sbjct: 1006 cgatggctcgtctcaacagcaaggctgtggtgtccgccgtggtcctggcggcggtggtgc 1065

                                                                        
Query: 111  tgatgatggccggcagggaggcctcggcggcgctgtcgtgcgggcaggtggactccaagc 170
            | |||||||||||||||||||   || |||| ||||||||||||||||||||||||||||
Sbjct: 1066 taatgatggccggcagggagg---cgacggcactgtcgtgcgggcaggtggactccaagc 1122

                                                                        
Query: 171  tcgcgccgtgcgtggcgtacgtcacggggagggcttctgctatcagcaaggagtgctgct 230
            |||||||||||||| ||||||| ||||||| |||  |  | |||||||||||||||||||
Sbjct: 1123 tcgcgccgtgcgtgtcgtacgtgacggggaaggcgccctcgatcagcaaggagtgctgct 1182

               
Query: 231  ccg 233
            |||
Sbjct: 1183 ccg 1185
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>ref|NM_001009072.1| Pan troglodytes sodium channel, nonvoltage-gated 1, delta (SCNN1D),
           mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 96  tggcggcggtggtgctgatgatggcc 121
           |||||||||||||||||||| |||||
Sbjct: 120 tggcggcggtggtgctgatggtggcc 95
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 100    ggcggtggtgctgatgatggccggca 125
              |||||||||||||||| |||||||||
Sbjct: 803414 ggcggtggtgctgatggtggccggca 803389
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>gb|AF038165.1|AF038165 Pan troglodytes epithelial sodium channel delta subunit mRNA,
           complete cds
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 96  tggcggcggtggtgctgatgatggcc 121
           |||||||||||||||||||| |||||
Sbjct: 120 tggcggcggtggtgctgatggtggcc 95
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>gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatiblity complex extended
             and classical class II region, partial sequence
          Length = 132445

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 103   ggtggtgctgatgatggccggcagg 127
             ||||||||||||||| |||||||||
Sbjct: 91051 ggtggtgctgatgatagccggcagg 91075
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>gb|AF114829.1| Oryza sativa lipid transfer protein gene, complete cds
          Length = 1802

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 171 tcgcgccgtgcgtggcgtacgtcacggggaggg 203
           ||||||||||| || ||||||||| ||||||||
Sbjct: 676 tcgcgccgtgcctgtcgtacgtcatggggaggg 708
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>emb|X73563.1|SBLPBL1A Streptomyces bambergiensis plasmid genes TRA1 - TRA5 and ORF4 and
           ORF7
          Length = 5746

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  ctggcggcggtggtgctgatg 115
           |||||||||||||||||||||
Sbjct: 418 ctggcggcggtggtgctgatg 438
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 94      cctggcggcggtggtgctgat 114
               |||||||||||||||||||||
Sbjct: 3082673 cctggcggcggtggtgctgat 3082653
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>gb|U29176.1|OSU29176 Oryza sativa lipid transfer protein precursor, mRNA, partial cds
          Length = 466

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 171 tcgcgccgtgcgtggcgtacgtcacggggaggg 203
           ||||||||||| || ||||||||| ||||||||
Sbjct: 52  tcgcgccgtgcctgtcgtacgtcatggggaggg 84
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>ref|XM_475667.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 85  cgccgttgtcctggcggcggtggtgctg 112
           |||||| |||||||||||| ||||||||
Sbjct: 84  cgccgtcgtcctggcggcgctggtgctg 111
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 85    cgccgttgtcctggcggcggtggtgctg 112
             |||||| |||||||||||| ||||||||
Sbjct: 35657 cgccgtcgtcctggcggcgctggtgctg 35684
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>gb|AC124012.4| Mus musculus BAC clone RP24-357P22 from chromosome 18, complete
             sequence
          Length = 193064

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     caccaccacacccactcatc 22
             ||||||||||||||||||||
Sbjct: 17696 caccaccacacccactcatc 17715
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>gb|BC013566.1| Homo sapiens aquaporin 3 (Gill blood group), mRNA (cDNA clone
           MGC:8708 IMAGE:3877096), complete cds
          Length = 1810

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 26  cggcggcgctgtcgggcgggcagg 3
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>emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on chromosome 9 Contains the
             3' end of the NFX1 gene for X-box binding nuclear
             transcription factor 1,  the AQP7 and AQP3 genes for
             aquaporin 7 and 3, a novel gene, the gene for nucleolar
             RNA-associated protein alpha, beta and gamma and a CpG
             island, complete sequence
          Length = 142839

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   cggcggcgctgtcgtgcgggcagg 158
             |||||||||||||| |||||||||
Sbjct: 93195 cggcggcgctgtcgggcgggcagg 93218
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>emb|X54488.1|CRCAH2 Chlamydomonas reinhardtii CAH2 gene for carbonic dehydratase
          Length = 4858

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 97   ggcggcggtggtgctgatgatggccggc 124
            ||||| ||||||| ||||||||||||||
Sbjct: 3462 ggcggtggtggtggtgatgatggccggc 3435
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tgctgatgatggccggcagg 127
              ||||||||||||||||||||
Sbjct: 103196 tgctgatgatggccggcagg 103177
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 77      gtggcggccgccgttgtcctggcggcgg 104
               ||||||||||| || |||||||||||||
Sbjct: 4572977 gtggcggccgcagtggtcctggcggcgg 4572950
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>emb|CR624600.1| full-length cDNA clone CS0DM001YP02 of Fetal liver of Homo sapiens
           (human)
          Length = 1780

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 39  cggcggcgctgtcgggcgggcagg 16
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>dbj|AK095363.1| Homo sapiens cDNA FLJ38044 fis, clone CTONG2014119, moderately
           similar to AQUAPORIN 3
          Length = 2911

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 55  cggcggcgctgtcgggcgggcagg 32
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>emb|CR604170.1| full-length cDNA clone CS0CAP003YG18 of Thymus of Homo sapiens
           (human)
          Length = 1786

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 34  cggcggcgctgtcgggcgggcagg 11
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>emb|CR599108.1| full-length cDNA clone CS0DI014YP03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1797

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 63  cggcggcgctgtcgggcgggcagg 40
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>emb|CR599072.1| full-length cDNA clone CS0DK011YG17 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1790

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 31  cggcggcgctgtcgggcgggcagg 8
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>emb|CR592288.1| full-length cDNA clone CS0DM009YA04 of Fetal liver of Homo sapiens
           (human)
          Length = 1793

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 36  cggcggcgctgtcgggcgggcagg 13
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>ref|NM_004925.3| Homo sapiens aquaporin 3 (Gill blood group) (AQP3), mRNA
          Length = 1835

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 51  cggcggcgctgtcgggcgggcagg 28
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>dbj|AB001325.1| Homo sapiens AQP3 mRNA for aquaporine 3, partail cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 49  cggcggcgctgtcgggcgggcagg 26
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>gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome 18, complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      caccaccacacccactcatc 22
              ||||||||||||||||||||
Sbjct: 128051 caccaccacacccactcatc 128070
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>gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds
          Length = 13709

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 135  cggcggcgctgtcgtgcgggcagg 158
            |||||||||||||| |||||||||
Sbjct: 2862 cggcggcgctgtcgggcgggcagg 2839
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>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    ggcggccgccgttgtcctgg 98
             ||||||||||||||||||||
Sbjct: 37933 ggcggccgccgttgtcctgg 37952
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 108      tgctgatgatggccggcagg 127
                ||||||||||||||||||||
Sbjct: 12583109 tgctgatgatggccggcagg 12583090
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 85       cgccgttgtcctggcggcggtggtgctg 112
                |||||| |||||||||||| ||||||||
Sbjct: 24966804 cgccgtcgtcctggcggcgctggtgctg 24966831
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     gggaggcctcggcggcgctg 145
               ||||||||||||||||||||
Sbjct: 6984484 gggaggcctcggcggcgctg 6984503
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 92      gtcctggcggcggtggtgctgatg 115
               |||||||||||||||| |||||||
Sbjct: 3618757 gtcctggcggcggtggcgctgatg 3618734
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>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full
            insert sequence
          Length = 3740

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 85   cgccgttgtcctggcggcggtggtgctg 112
            |||||| |||||||||||| ||||||||
Sbjct: 1564 cgccgtcgtcctggcggcgctggtgctg 1591
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 77      gtggcggccgccgttgtcctggcggcgg 104
               ||||||||||| || |||||||||||||
Sbjct: 4577737 gtggcggccgcagtggtcctggcggcgg 4577710
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>dbj|D50486.1|HUMA3 Homo sapiens AQP3 gene for aquaporin 3, partial cds and 5' flanking
           region
          Length = 333

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 135 cggcggcgctgtcgtgcgggcagg 158
           |||||||||||||| |||||||||
Sbjct: 312 cggcggcgctgtcgggcgggcagg 289
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 108      tgctgatgatggccggcagg 127
                ||||||||||||||||||||
Sbjct: 12590449 tgctgatgatggccggcagg 12590430
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>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete
             sequence
          Length = 202412

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    tggcggcggtggtgctgatgatgg 119
             |||||||||||||| |||||||||
Sbjct: 72003 tggcggcggtggtggtgatgatgg 71980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,890,357
Number of Sequences: 3902068
Number of extensions: 1890357
Number of successful extensions: 65662
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65168
Number of HSP's gapped (non-prelim): 490
length of query: 233
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 211
effective length of database: 17,147,199,772
effective search space: 3618059151892
effective search space used: 3618059151892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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