>CACM_YEAST (P80235) Putative mitochondrial carnitine O-acetyltransferase (EC|
           2.3.1.7)
          Length = 687

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 120 LDVDTHAALADADRSPAGPGAARLHVDADATLAHI 16
           L +D +  L  + R P GPG    H+  DAT  H+
Sbjct: 155 LSMDQYERLFGSSRIPPGPGEPSCHLQTDATSHHV 189

>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +2

Query: 50   SLAAPGPAGLRSASARAAWVSTSSLATASPGAQQLALARAAWTSTSNL 193
            S A+PGP  L S+S+ ++   +SS ++ SP    L+   +  +S  NL
Sbjct: 1034 SAASPGPPTLSSSSSSSSSFPSSSCSSTSPSPPPLSAVSSVVSSGDNL 1081

>HDC_HUMAN (Q9UBI9) Headcase protein homolog (hHDC)|
          Length = 543

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 50  SLAAPGPAGLRSASARAAWVSTSSLATASPGAQQLALARAAWTSTSN 190
           +LAA G AG  +  A AA     + A  +PGA   A A  A T  +N
Sbjct: 29  ALAAAGAAGAAAGGALAAAAGCGAAAAGAPGAGGAAGAGGAGTGAAN 75

>MURD_CORJK (Q4JW97) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 502

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +2

Query: 53  LAAPGPAGLRSASARAAWVSTSSLATASPGAQQLALA 163
           ++ PGPAGL  A+A AA      +A   PGA + ALA
Sbjct: 305 ISPPGPAGLADAAASAAMARALGVA---PGAIEAALA 338

>XANP_XANS2 (Q60106) Xanthomonalisin precursor (EC 3.4.21.101) (Xanthomonas|
           aspartic proteinase) (Xanthomonapepsin) (Carboxyl
           proteinase) (XCP)
          Length = 827

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 83  SASARAAWVSTSSLATASPGAQQLALARAAWTSTS 187
           SA A  AWVST + A  SP A    LA ++ ++T+
Sbjct: 20  SAHAEDAWVSTHTQAAMSPPASTQVLAASSTSATT 54

>DPOL_HHBV (P13846) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 788

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 117 DVDTHAALADADRSPAGPGAARLHVDADATLAHIDRR 7
           D  +  ALA  D +P GPG+   H     +  H+DRR
Sbjct: 268 DPTSRGALAGGDSTPIGPGSTAAH----PSTHHVDRR 300

>FBIC_STRAW (Q82GV2) FO synthase (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase)
          Length = 861

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
 Frame = -2

Query: 189 FDVDVHAALANANCCAPGLAVARLDVDTHAALADADRSPA----GPGAARLHVDADA 31
           FDV      A     APG+   R+D D   ALA A   P         A LH D  A
Sbjct: 452 FDVVYGDWEALREAAAPGMVPERIDTDVRQALATAANDPTRLTDAEALALLHADGPA 508

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 23  ARVASAST*SLAAPGPAGLRSASARAAWVSTSSLATASPGA 145
           A  +S+S  S +AP PAG  S++A AA  S S+ +  + GA
Sbjct: 557 ASASSSSASSSSAPTPAGAASSAAGAASSSASASSGGAVGA 597

>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
           (Transcription factor GATA-B) (dGATA-B) (Protein
           serpent)
          Length = 1264

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 50  SLAAPGPAGLRSASARAAWVSTSSLATASPGAQQLAL 160
           S ++PGPAGL  +S+ AA  +  + ATA+      +L
Sbjct: 567 SSSSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSL 603

>FBIC_STRCO (Q9KZZ7) FO synthase (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase)
          Length = 867

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = -2

Query: 144 APGLAVARLDVDTHAALADADRSPA----GPGAARLHVDADA 31
           APG+A  R+D D  AALA A   P         A LH +  A
Sbjct: 473 APGMAPERIDTDVRAALATAADDPTKLTDDEALALLHAEGPA 514

>ABF1_STRCX (P82593) Alpha-N-arabinofuranosidase 1 precursor (EC 3.2.1.55)|
           (Alpha-N-arabinofuranosidase I) (Arabinosidase I)
           (Alpha-N-AFase I)
          Length = 825

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +2

Query: 14  SMWARVASAST*SLAAPGPAG----LRSASARAAWVSTSSLATASPGAQQLALARAA 172
           S+WAR  SAST ++A    AG     R  +    W    +  TA+  + +  LA AA
Sbjct: 145 SVWARAGSASTLTVALKDAAGTLATARQVAVEGGWAKYRATFTATRTSNRGRLAVAA 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.288    0.104    0.265 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,700,523
Number of Sequences: 219361
Number of extensions: 201825
Number of successful extensions: 345
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 45 (22.0 bits)