>CHL12_EMENI (P0C1D3) Protein CHL12|
          Length = 993

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 148 HPSISCR--SAFDWMLSKLVRSNTDGFHLLFLHVQVPDEDGFDDVD 279
           H +IS R  SA DW L   +   T  FHLLF   Q   +  + ++D
Sbjct: 677 HDTISSRIYSAHDWELGAYLSQATSAFHLLFATAQGKAQQQYREID 722

>ECT2_MOUSE (Q07139) ECT2 protein (Epithelial cell-transforming sequence 2|
           oncogene)
          Length = 738

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 10  NFPKTPLPLLLAKEANSERGRARMADSSAPTRVMMAVNESSLKGYPHPS-ISCRSAFDWM 186
           +F KTP   L    ++S     R   SS    V    + SSL G P PS +S  S F+  
Sbjct: 667 SFSKTPKRALRMALSSSHSSEGRSPPSSGKLAVSRLSSTSSLAGIPSPSLVSLPSFFERR 726

Query: 187 LSKLVRSNT 213
              L RS T
Sbjct: 727 SHTLSRSTT 735

>ASNA_HAEIN (P44338) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine|
           synthetase A)
          Length = 330

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 181 WMLSKLVRSNTDGFHLLFLHVQV--PDEDGFDDVDSIYASPTDFQSMKQRDKIRGIHLLE 354
           W    L R N      LF+H++   PDED  D   S+Y    D++ +    + R    L+
Sbjct: 76  WKRHTLARFNFKEDEGLFVHMKALRPDEDSLDPTHSVYVDQWDWEKVIPEGR-RNFAYLK 134

Query: 355 YFVNECHR 378
             VN  +R
Sbjct: 135 ETVNSIYR 142

>AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 911

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 387 YPQSMAFIHEVLK*VNPSYLVSLLHALEVRR 295
           Y      + +++K VNP+YL  L+H +E+RR
Sbjct: 475 YVNEALTLEDIMKIVNPNYLNDLVHHMELRR 505

>SYIC_CAEEL (Q21926) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)|
            (Isoleucine--tRNA ligase) (IleRS)
          Length = 1141

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +1

Query: 79   MADSSAPTRVMMAVNESSLKGYPHPSISCRSAFDWMLSKLVRSNTDG 219
            + D S   RV +   +  LKGY       RSA D    K+   N DG
Sbjct: 1074 VVDGSKKVRVHVKTEKEHLKGYADLLYHVRSALDLWNGKIALKNVDG 1120

>PAP2_YEAST (P53632) Poly(A) RNA polymerase protein 2 (EC 2.7.7.-) (DNA|
           polymerase sigma) (DNA polymerase kappa) (Topoisomerase
           1-related protein TRF4)
          Length = 584

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +1

Query: 190 SKLVRSNTDGFHLLFLHVQVPDEDGFDDVDSIYASPTDFQSMKQRDK 330
           +KL + +     +L L  +  D++GFD  D  + +PTD  S  +  K
Sbjct: 58  NKLPKDHVTADGILVLEHKSDDDEGFDVYDGHFDNPTDIPSTTEESK 104

>PT1_STRCO (Q9KZP1) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 556

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -3

Query: 224 WKPSVLERTSLESIQSKAERQLMEGCGYPLSDDSFTAIITRVGADESAIRA 72
           W+P++L+  +L +  +KAE +    CG   +D     ++T +G    ++ A
Sbjct: 461 WQPALLDLVALSAEAAKAEGKSCGVCGEAAADPLLACVLTGLGVTSLSMGA 511

>VGH_BPG4 (P03647) Minor spike protein (H protein) (Pilot protein)|
          Length = 337

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -3

Query: 215 SVLERTSLESIQSKAE--RQLM---EGCGYPLSDDSFTAIITRVGADESAIRA 72
           ++LE TSL   Q  +E  RQ++   +  G   ++D    +  +VGAD  A+RA
Sbjct: 207 AILENTSLTKQQQTSEIMRQMLTQAQTAGQYFTNDQIKELTRKVGADIDAVRA 259

>ASNA_STRR6 (Q8CWN8) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine|
           synthetase A)
          Length = 330

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +1

Query: 181 WMLSKLVRSNTDGFHLLFLHVQV--PDEDGFDDVDSIYASPTDFQSMKQRDKIRGIHLLE 354
           W    L R        LF+H++   PDED  D   S+Y    D++ +    K   ++L E
Sbjct: 76  WKRHTLARFGFGEGEGLFVHMKALRPDEDSLDATHSVYVDQWDWEKVIPNGKRNIVYLKE 135

>ASNA_STRPN (Q97NQ0) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine|
           synthetase A)
          Length = 330

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +1

Query: 181 WMLSKLVRSNTDGFHLLFLHVQV--PDEDGFDDVDSIYASPTDFQSMKQRDKIRGIHLLE 354
           W    L R        LF+H++   PDED  D   S+Y    D++ +    K   ++L E
Sbjct: 76  WKRHTLARFGFGEGEGLFVHMKALRPDEDSLDATHSVYVDQWDWEKVIPNGKRNIVYLKE 135

>ASNA_PASMU (Q9CKN6) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine|
           synthetase A)
          Length = 330

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +1

Query: 181 WMLSKLVRSNTDGFHLLFLHVQV--PDEDGFDDVDSIYASPTDFQSM 315
           W    L R N      LF+H+    PDED  D   S+Y    D++ +
Sbjct: 76  WKRHTLARFNFAQGEGLFVHMTALRPDEDSLDQTHSVYVDQWDWEKV 122

>ASNA_HAEDU (Q7VKJ0) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine|
           synthetase A)
          Length = 330

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 181 WMLSKLVRSNTDGFHLLFLHVQV--PDEDGFDDVDSIYASPTDFQSMKQRDKIRGIHLLE 354
           W    L R        LF+H++   PDED  D   SIY    D++ +    + R    L+
Sbjct: 76  WKRHTLARFGFKQGEGLFVHMKALRPDEDSLDPTHSIYVDQWDWEKVIPEGQ-RNFAYLK 134

Query: 355 YFVNECHR 378
             VN+ ++
Sbjct: 135 QTVNQIYK 142

>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like|
           protein 3)
          Length = 521

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +1

Query: 112 MAVNESSLKGYPHPSISCRSAFDWMLSKLVRSNTDGFHLLFLHVQVPDEDGF 267
           + + E  LK   +   +C  A + +  +L+R   DG+ ++   V +PD DGF
Sbjct: 23  LKILEKMLKKCSYEVTTCGLAREAL--RLLRERKDGYDIVISDVNMPDMDGF 72

>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like|
           protein 5)
          Length = 664

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 196 LVRSNTDGFHLLFLHVQVPDEDGF 267
           L+R N +GF ++   V +PD DGF
Sbjct: 66  LLRKNKNGFDIVISDVHMPDMDGF 89

>ARR1_ARATH (Q940D0) Two-component response regulator ARR1|
          Length = 690

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 184 MLSKLVRSNTDGFHLLFLHVQVPDEDGF 267
           M   L+R N  GF ++   V +PD DGF
Sbjct: 71  MALSLLRKNKHGFDIVISDVHMPDMDGF 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,464,780
Number of Sequences: 219361
Number of extensions: 696559
Number of successful extensions: 2376
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2376
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)