Clone Information

BLAST Search Result

Clone Name	baet04a11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	201	6e-52
2	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	185	4e-47
3	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	182	3e-46
4	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	181	6e-46
5	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	181	8e-46
6	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	181	8e-46
7	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	180	1e-45
8	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	180	1e-45
9	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	180	1e-45
10	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	180	2e-45
11	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	179	4e-45
12	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	179	4e-45
13	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	179	4e-45
14	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	178	5e-45
15	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	178	7e-45
16	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	177	9e-45
17	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	177	1e-44
18	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	176	3e-44
19	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	175	6e-44
20	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	174	7e-44
21	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	174	1e-43
22	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	173	2e-43
23	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	172	3e-43
24	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	172	3e-43
25	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	171	6e-43
26	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	171	8e-43
27	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	171	1e-42
28	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	171	1e-42
29	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	170	1e-42
30	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	170	2e-42
31	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	170	2e-42
32	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	169	4e-42
33	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	168	5e-42
34	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	167	9e-42
35	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	166	2e-41
36	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	162	3e-40
37	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	160	1e-39
38	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	157	9e-39
39	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	155	3e-38
40	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	155	6e-38
41	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	155	6e-38
42	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	152	3e-37
43	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	152	3e-37
44	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	151	7e-37
45	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	150	1e-36
46	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	150	2e-36
47	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	148	6e-36
48	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	145	6e-35
49	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	140	2e-33
50	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	137	1e-32
51	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	131	9e-31
52	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	130	1e-30
53	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	125	7e-29
54	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	124	9e-29
55	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	123	3e-28
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	115	7e-26
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	96	6e-20
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	80	2e-15
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	75	6e-14
60	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	70	3e-12
61	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	69	4e-12
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	63	4e-10
63	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	60	2e-09
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	55	6e-08
65	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	54	2e-07
66	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	53	3e-07
67	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	52	9e-07
68	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	51	1e-06
69	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	38	0.014
70	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	36	0.040
71	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	35	0.069
72	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	35	0.12
73	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	34	0.20
74	HIS7_SYNY3 (P48054) Imidazoleglycerol-phosphate dehydratase (EC ...	33	0.45
75	HIS7B_ARATH (O23346) Probable imidazoleglycerol-phosphate dehydr...	32	0.76
76	HIS7A_ARATH (P34047) Imidazoleglycerol-phosphate dehydratase 1 (...	32	0.76
77	PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99....	32	0.99
78	SEM6B_RAT (O70141) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)	31	1.7
79	MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate dehyd...	31	1.7
80	PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EII...	31	1.7
81	HIS7_PEA (Q43072) Imidazoleglycerol-phosphate dehydratase (EC 4....	30	2.2
82	NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleopor...	30	2.9
83	NUP88_HUMAN (Q99567) Nuclear pore complex protein Nup88 (Nucleop...	30	2.9
84	HIS7_SYNEL (Q8DMI3) Imidazoleglycerol-phosphate dehydratase (EC ...	30	2.9
85	NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleop...	30	2.9
86	MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate dehyd...	30	2.9
87	GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	30	3.8
88	HIS7_PROMA (Q7VDQ5) Imidazoleglycerol-phosphate dehydratase (EC ...	30	3.8
89	TAOK2_XENLA (Q6GPK9) Serine/threonine-protein kinase TAO2 (EC 2....	30	3.8
90	HIS7_TRIS1 (Q93DQ9) Imidazoleglycerol-phosphate dehydratase (EC ...	29	4.9
91	CNTRB_MOUSE (Q8CB62) Centrobin (LYST-interacting protein 8)	29	4.9
92	PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, ...	29	4.9
93	HPS6_HUMAN (Q86YV9) Hermansky-Pudlak syndrome 6 protein (Ruby-ey...	29	6.4
94	CH60_STRR6 (P0A336) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	6.4
95	CH60_STRPN (P0A335) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	6.4
96	ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB...	29	6.4
97	CYCG_RHOS4 (Q53143) Diheme cytochrome c-type	29	6.4
98	HIS7_SYNPX (Q7U9M8) Imidazoleglycerol-phosphate dehydratase (EC ...	29	6.4
99	HIS7_ANASP (Q05068) Imidazoleglycerol-phosphate dehydratase (EC ...	29	6.4
100	GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	28	8.4
101	GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.4
102	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.4
103	GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.4
104	GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.4
105	RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)	28	8.4
106	MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate dehyd...	28	8.4
107	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	8.4
108	ANKS3_RAT (Q5M9H0) Ankyrin repeat and SAM domain-containing prot...	28	8.4

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  201 bits (512), Expect = 6e-52
 Identities = 95/117 (81%), Positives = 99/117 (84%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK VK+LPSS+L G+                SSSPWYGSDRVLYLGPLSGEPPSYLTG
Sbjct: 13  FAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  185 bits (470), Expect = 4e-47
 Identities = 93/118 (78%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXX-XXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK V ++PSSS FGE                 S SPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  182 bits (462), Expect = 3e-46
 Identities = 93/118 (78%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSS-SPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK V ++PSS LFGE                SS SPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  181 bits (460), Expect = 6e-46
 Identities = 89/118 (75%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  181 bits (459), Expect = 8e-46
 Identities = 89/118 (75%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  181 bits (459), Expect = 8e-46
 Identities = 89/118 (75%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGKVVK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+L ARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 130

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  180 bits (457), Expect = 1e-45
 Identities = 89/118 (75%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  180 bits (457), Expect = 1e-45
 Identities = 89/118 (75%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 SSSPWYG +RV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130



 Score = 29.6 bits (65), Expect(2) = 0.71
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +2

Query: 251 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLAR 430
           ++GEP   +         +D  GL+ DPE FA+ +  E+ + R AM    G     ++  
Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237

Query: 431 NG 436
            G
Sbjct: 238 KG 239



 Score = 21.2 bits (43), Expect(2) = 0.71
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 91  LFPSLCRQGSEGLAIVVSFRGGSRHHAQDG 180
           +FP L  +        V F+GGS+  +Q G
Sbjct: 115 VFPELLARNGVKFGEAVWFKGGSQIFSQGG 144

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  180 bits (457), Expect = 1e-45
 Identities = 89/118 (75%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  180 bits (456), Expect = 2e-45
 Identities = 89/118 (75%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +2

Query: 251 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLAR 430
           ++GEP   +         +D  GL+ DPE FA+ +  E+ + R AM    G     L+  
Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236

Query: 431 NG 436
            G
Sbjct: 237 KG 238

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  179 bits (453), Expect = 4e-45
 Identities = 88/117 (75%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
 Frame = +2

Query: 107 AGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           AGK VK  P++S + GE                SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  179 bits (453), Expect = 4e-45
 Identities = 89/118 (75%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  P +S +FG                 S SPWYGSDRV YLGP SGEPPSYLT
Sbjct: 13  FAGKAVKLSPGASEVFG--TGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLT 70

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  179 bits (453), Expect = 4e-45
 Identities = 87/108 (80%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
 Frame = +2

Query: 134 SSSLFGEXXXXXXXXXXXXXXXXSS-SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 310
           SS+LFGE                SS SPWYG+DRVLYLGPLSGEPPSYLTGEFPGDYGWD
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80

Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  178 bits (452), Expect = 5e-45
 Identities = 88/118 (74%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAG  VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  178 bits (451), Expect = 7e-45
 Identities = 88/118 (74%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  GEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  177 bits (450), Expect = 9e-45
 Identities = 83/107 (77%), Positives = 88/107 (82%)
 Frame = +2

Query: 134 SSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 313
           ++ +FGE                S SPWYG+DRVLYLGPLSGEPPSYLTGEFPGDYGWDT
Sbjct: 18  AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77

Query: 314 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           AGLSADPETFAKNRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 78  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 124

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  177 bits (449), Expect = 1e-44
 Identities = 85/117 (72%), Positives = 87/117 (74%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK V    SS + G                 S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+L ARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  176 bits (445), Expect = 3e-44
 Identities = 87/117 (74%), Positives = 90/117 (76%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAG+ VK  PS+S                    SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGQAVKLSPSASEIS-GNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  175 bits (443), Expect = 6e-44
 Identities = 86/118 (72%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK   SSS + G                 SSSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+L ARNG+KFGEA
Sbjct: 73  GEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEA 130

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  174 bits (442), Expect = 7e-44
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S+SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRW
Sbjct: 54  STSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRW 113

Query: 383 AMLGALGCVFPKLLARNGVKFGEA 454
           AMLGALGCVFP+LLARNGVKFGEA
Sbjct: 114 AMLGALGCVFPELLARNGVKFGEA 137

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  174 bits (440), Expect = 1e-43
 Identities = 89/117 (76%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
 Frame = +2

Query: 107 AGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           AGK VK  PSSS LFG                 S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKVAPSSSELFGNGRVSMRKTVKAPV---SDSPWYGPDRVKYLGPFSGEAPSYLTG 70

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 127

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  173 bits (438), Expect = 2e-43
 Identities = 86/117 (73%), Positives = 89/117 (76%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAG+ VK  PS+                     SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGQAVKLSPSAPEI-TGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  172 bits (437), Expect = 3e-43
 Identities = 85/117 (72%), Positives = 89/117 (76%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK VK  P++S                    S SPWYGSDRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  172 bits (437), Expect = 3e-43
 Identities = 83/116 (71%), Positives = 87/116 (75%)
 Frame = +2

Query: 107 AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 286
           AGK +K  PSS   G                 S SPWYG DRV YLGP SGE PSYLTGE
Sbjct: 17  AGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFP+LL+RNGVKFGEA
Sbjct: 77  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 132

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  171 bits (434), Expect = 6e-43
 Identities = 87/118 (73%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK+L SSS + G+                  SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLT 69

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 70  GEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEA 127

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  171 bits (433), Expect = 8e-43
 Identities = 85/116 (73%), Positives = 88/116 (75%)
 Frame = +2

Query: 107 AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 286
           AGK VK  PS+   G                 S SPWYG DRV YLGP SGEPPSYLTGE
Sbjct: 15  AGKAVKLGPSAPEVGRVSMRKTVTKQVS----SGSPWYGPDRVKYLGPFSGEPPSYLTGE 70

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+LL+RNGVKFGEA
Sbjct: 71  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 126

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  171 bits (432), Expect = 1e-42
 Identities = 84/117 (71%), Positives = 88/117 (75%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK V   P++S                    S SPWYGSDRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  171 bits (432), Expect = 1e-42
 Identities = 78/82 (95%), Positives = 79/82 (96%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 60  SPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 119

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP+LLARNGVKFGEA
Sbjct: 120 LGALGCVFPELLARNGVKFGEA 141

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  170 bits (431), Expect = 1e-42
 Identities = 80/103 (77%), Positives = 82/103 (79%)
 Frame = +2

Query: 146 FGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325
           FGE                S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLS
Sbjct: 23  FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82

Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           ADPETFAKNRELEVIH RWAMLGALGCVFP+LL+RNGVKFGEA
Sbjct: 83  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 125

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  170 bits (430), Expect = 2e-42
 Identities = 78/84 (92%), Positives = 79/84 (94%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 25  SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 84

Query: 383 AMLGALGCVFPKLLARNGVKFGEA 454
           AMLGALGCVFP+LLARNGVKFGEA
Sbjct: 85  AMLGALGCVFPELLARNGVKFGEA 108

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  170 bits (430), Expect = 2e-42
 Identities = 77/82 (93%), Positives = 79/82 (96%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 60  SPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 119

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP+LLARNGVKFGEA
Sbjct: 120 LGALGCVFPELLARNGVKFGEA 141

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  169 bits (427), Expect = 4e-42
 Identities = 77/84 (91%), Positives = 79/84 (94%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 35  SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 94

Query: 383 AMLGALGCVFPKLLARNGVKFGEA 454
           AMLGALGCVFP+LL+RNGVKFGEA
Sbjct: 95  AMLGALGCVFPELLSRNGVKFGEA 118

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  168 bits (426), Expect = 5e-42
 Identities = 81/117 (69%), Positives = 84/117 (71%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK V    SS +                   S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           EFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFP+L ARNGVKFGEA
Sbjct: 73  EFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEA 129

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  167 bits (424), Expect = 9e-42
 Identities = 79/108 (73%), Positives = 82/108 (75%)
 Frame = +2

Query: 131 PSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 310
           PSS   G                 S SPWYG DRV YLGP SGE PSYLTGEFPGDYGWD
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83

Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFP+LL+RNGVKFGEA
Sbjct: 84  TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 131

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  166 bits (421), Expect = 2e-41
 Identities = 77/103 (74%), Positives = 81/103 (78%)
 Frame = +2

Query: 143 LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 322
           +FGE                S SPWYG+DRVLYLGPLSG PPSYLTGEFPGDYGWDT GL
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83

Query: 323 SADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGE 451
           SADPETFAKNRELEVIHCRWA+   LGCVFP+LLARNGVKFGE
Sbjct: 84  SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGE 126

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  162 bits (411), Expect = 3e-40
 Identities = 75/84 (89%), Positives = 78/84 (92%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           SSSPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 8   SSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 67

Query: 383 AMLGALGCVFPKLLARNGVKFGEA 454
           AMLGALGCVFP+LL+RNGVKFGEA
Sbjct: 68  AMLGALGCVFPELLSRNGVKFGEA 91

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  160 bits (405), Expect = 1e-39
 Identities = 74/84 (88%), Positives = 77/84 (91%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S S WYGSDR LYLGP SG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 45  SGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 104

Query: 383 AMLGALGCVFPKLLARNGVKFGEA 454
           AMLGALGCV P+LLA+NGVKFGEA
Sbjct: 105 AMLGALGCVTPELLAKNGVKFGEA 128

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  157 bits (398), Expect = 9e-39
 Identities = 72/82 (87%), Positives = 75/82 (91%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM
Sbjct: 46  SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP+LLA+NGVKFGEA
Sbjct: 106 LGALGCVFPELLAKNGVKFGEA 127

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  155 bits (393), Expect = 3e-38
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 206 SSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 385
           +S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA
Sbjct: 46  TSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 386 MLGALGCVFPKLLARNGVKFGEA 454
           MLGALGCVFP++L++NGVKFGEA
Sbjct: 106 MLGALGCVFPEILSKNGVKFGEA 128

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  155 bits (391), Expect = 6e-38
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP++L++NGVKFGEA
Sbjct: 107 LGALGCVFPEILSKNGVKFGEA 128

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  155 bits (391), Expect = 6e-38
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP++L++NGVKFGEA
Sbjct: 107 LGALGCVFPEILSKNGVKFGEA 128

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  152 bits (385), Expect = 3e-37
 Identities = 68/82 (82%), Positives = 74/82 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 19  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 78

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP++L++NGV FGEA
Sbjct: 79  LGALGCVFPEILSKNGVTFGEA 100

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  152 bits (385), Expect = 3e-37
 Identities = 68/82 (82%), Positives = 74/82 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP++L++NGV FGEA
Sbjct: 107 LGALGCVFPEILSKNGVTFGEA 128

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  151 bits (382), Expect = 7e-37
 Identities = 69/82 (84%), Positives = 73/82 (89%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAM
Sbjct: 48  SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAM 107

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP+LLA+NG+KFGEA
Sbjct: 108 LGALGCVFPELLAKNGLKFGEA 129

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  150 bits (380), Expect = 1e-36
 Identities = 68/82 (82%), Positives = 74/82 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAM
Sbjct: 45  SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 104

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGCVFP++L++NGVKFGEA
Sbjct: 105 LGALGCVFPEILSKNGVKFGEA 126



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  150 bits (378), Expect = 2e-36
 Identities = 67/82 (81%), Positives = 75/82 (91%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG+DR  +LGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 46  SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 105

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGC+FP+LL++NGV+FGEA
Sbjct: 106 LGALGCIFPELLSKNGVQFGEA 127

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  148 bits (374), Expect = 6e-36
 Identities = 68/82 (82%), Positives = 72/82 (87%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAM
Sbjct: 47  SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 106

Query: 389 LGALGCVFPKLLARNGVKFGEA 454
           LGALGC FP+LL +NGVKFGEA
Sbjct: 107 LGALGCTFPELLEKNGVKFGEA 128

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  145 bits (365), Expect = 6e-35
 Identities = 70/114 (61%), Positives = 81/114 (71%)
 Frame = +2

Query: 113 KVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFP 292
           K V +L S  + G                 S + WYG+DR  +LGP SGE PSYL GEF 
Sbjct: 19  KPVNEL-SRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFA 77

Query: 293 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ P+LLA++GVKFGEA
Sbjct: 78  GDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEA 131



 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  140 bits (353), Expect = 2e-33
 Identities = 64/69 (92%), Positives = 66/69 (95%)
 Frame = +2

Query: 248 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLA 427
           P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFP+LL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 428 RNGVKFGEA 454
           RNGVKFGEA
Sbjct: 61  RNGVKFGEA 69

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  137 bits (345), Expect = 1e-32
 Identities = 74/116 (63%), Positives = 78/116 (67%)
 Frame = +2

Query: 107 AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 286
           AG+ +K  PS+   G                 S SPWYG DRV YLGP SGE PSYLTGE
Sbjct: 14  AGQAMKLAPSTPELG--VGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
           F G        LSADPETFAKNRELEVIH RWAMLGALGCVFP+LLARNGVKFGEA
Sbjct: 72  FHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 119

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  131 bits (329), Expect = 9e-31
 Identities = 61/80 (76%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = +2

Query: 215 WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 394
           WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 50  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109

Query: 395 ALGCVFPKLLAR-NGVKFGE 451
           ALGCVFP++L +  GV+F E
Sbjct: 110 ALGCVFPEVLQKWVGVEFKE 129



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     ++   G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  130 bits (328), Expect = 1e-30
 Identities = 58/76 (76%), Positives = 64/76 (84%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S+  WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RW
Sbjct: 43  SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 102

Query: 383 AMLGALGCVFPKLLAR 430
           AMLGALGC+FP++L +
Sbjct: 103 AMLGALGCIFPEVLEK 118



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     ++   G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  125 bits (313), Expect = 7e-29
 Identities = 59/80 (73%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = +2

Query: 215 WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 394
           WYG DR  +LGP S   P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 395 ALGCVFPKLLAR-NGVKFGE 451
           ALG + P+LL+   GVKFGE
Sbjct: 99  ALGILTPELLSTYAGVKFGE 118



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  124 bits (312), Expect = 9e-29
 Identities = 59/85 (69%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           S   +YG +R  +LGP S    P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH R
Sbjct: 32  SGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHAR 91

Query: 380 WAMLGALGCVFPKLLARNGVKFGEA 454
           WAMLGALGC  P+LLA++G KFGEA
Sbjct: 92  WAMLGALGCQTPELLAKSGTKFGEA 116

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  123 bits (308), Expect = 3e-28
 Identities = 60/75 (80%), Positives = 63/75 (84%)
 Frame = +2

Query: 230 RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 409
           RV YLGP SGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

Query: 410 FPKLLARNGVKFGEA 454
           FP+LL+  G  FGEA
Sbjct: 118 FPELLSVMGQGFGEA 132

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  115 bits (287), Expect = 7e-26
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 391
           +YG DR  +LGP S  + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 392 GALGCVFPKLLAR-NGVKFGE 451
           GALG + P+LL++  GV+FGE
Sbjct: 93  GALGILTPELLSQYAGVQFGE 113



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 95.5 bits (236), Expect = 6e-20
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S++ +YG D       L  + P   TGEFPGDYGWDTAGLSADPETF + RELE+IH R 
Sbjct: 53  SANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARC 111

Query: 383 AMLGALGCVFPKLLA-RNGVKFGEA 454
            +LGALG V P+LLA  +G+KFG+A
Sbjct: 112 GLLGALGMVTPELLADEDGIKFGDA 136



 Score = 32.3 bits (72), Expect = 0.58
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNG 436
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = +2

Query: 215 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 385
           WYG DR ++L  G L   E P YL GE  GDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 386 MLGALGCVFPKLLARNGVKFG 448
           MLGA G + P+ L + G   G
Sbjct: 122 MLGAAGFIIPEALNKYGANCG 142

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 30/59 (50%), Positives = 43/59 (72%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGV 439
           PP +L G  PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   P+LL + G+
Sbjct: 74  PPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI 132

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 29/59 (49%), Positives = 39/59 (66%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGV 439
           PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G   P+ L + GV
Sbjct: 74  PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV 132

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVK 442
           PP YLTGE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ P+LL  NG  
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG-NGAW 438

Query: 443 F 445
           F
Sbjct: 439 F 439



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +2

Query: 254 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLAR 430
           + EPP+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ P+LL +
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251



 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLAR 430
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P  L +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 251 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLL 424
           + G+P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML   G + P+ L
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = +2

Query: 260 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLAR 430
           +PP++LTGE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + P+LL +
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK 223



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +2

Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGVKF 445
           P  + + R  EV + R AML  +GCV+P+LL  NGV F
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELLG-NGVWF 37

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPKLLARNGV 439
           P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G + P++  + G+
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 121

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
 Frame = +2

Query: 221 GSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRW 382
           G++R L+    S +  SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+
Sbjct: 50  GANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRF 106

Query: 383 AMLGALGCVFPKLLARNGV 439
           AMLGA G + P++L + G+
Sbjct: 107 AMLGAAGAIAPEILGKAGL 125

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
 Frame = +2

Query: 242 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 415
           + P +G+  S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 416 KLLARN--GVKFGEA 454
           + ++ +  G  +G+A
Sbjct: 192 EAVSGDTWGTYWGDA 206

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 36.2 bits (82), Expect = 0.040
 Identities = 31/105 (29%), Positives = 36/105 (34%), Gaps = 43/105 (40%)
 Frame = +2

Query: 224 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------ 352
           SDR L+      + P YL G   GDYG+D  GL    E             AKN      
Sbjct: 50  SDRPLWFP--GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVI 107

Query: 353 --------------------------RELEVIHCRWAMLGALGCV 409
                                     RE E+IH RWAML  LG +
Sbjct: 108 GTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAI 152



 Score = 33.5 bits (75), Expect = 0.26
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           VL +G +  +  + L  E   +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.4 bits (80), Expect = 0.069
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           VL +G +  +  + L  E   +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 33.1 bits (74), Expect = 0.34
 Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 44/106 (41%)
 Frame = +2

Query: 224 SDRVL-YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN----- 352
           +DR L Y G +S   P +L G   GDYG+D  GL    E             AKN     
Sbjct: 53  TDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDV 109

Query: 353 ---------------------------RELEVIHCRWAMLGALGCV 409
                                      RE E+IH RWAML  LG +
Sbjct: 110 IGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGAL 155

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 45/108 (41%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 352
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 353 --------------RELEVIHCRWAMLGALGCVFPKLLARNGVKFGEA 454
                         RE E+IH RWAML  LG +  +  A  GV + EA
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 27/92 (29%), Positives = 31/92 (33%), Gaps = 43/92 (46%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 352
           PP +L G   GD G+D  GL    E             AKN                   
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 353 -------------RELEVIHCRWAMLGALGCV 409
                        RE E+IH RWAMLG LG +
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAI 156



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +2

Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 400
           VL +G +  +  S L  E   +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>HIS7_SYNY3 (P48054) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 97
           H ++EATF AFA  +RM     P+R D      T+P+  G
Sbjct: 175 HHIIEATFKAFARAMRMAIEVDPRRAD------TIPSSKG 208

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>HIS7B_ARATH (O23346) Probable imidazoleglycerol-phosphate dehydratase 2 (EC|
           4.2.1.19) (IGPD 2)
          Length = 259

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 97
           H ++EATF AFA  LR  T + P+R        T+P+  G
Sbjct: 221 HHIIEATFKAFARALRQATESDPRRGG------TIPSSKG 254

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>HIS7A_ARATH (P34047) Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19)|
           (IGPD 1)
          Length = 270

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 225 EPYHGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 97
           E  H ++EATF AFA  LR  T   P+R        T+P+  G
Sbjct: 229 ENSHHIIEATFKAFARALRQATETDPRRGG------TIPSSKG 265

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>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)|
           (Pyrroloquinoline quinone biosynthesis protein F)
          Length = 766

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 217 PRAAGGNLLGLCRRLAHGDASLPEKRRRWQVLH 119
           P A GG L  LC+ LA  D  +  +RR  +V+H
Sbjct: 96  PNALGGGLERLCQMLAEPDLGIERQRREREVIH 128

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>SEM6B_RAT (O70141) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)|
          Length = 887

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 29/72 (40%)
 Frame = -1

Query: 450 SPNLTPLRASSLGKTQPSAPSMAQRQWITSSSRFLAKVSGSADSPAVSHP*SPGNSPVR* 271
           +P  TPL    L  T P A ++  R W    S  L   S S     ++H  +P   PV  
Sbjct: 710 TPEQTPLPQKRLPTTHPHAHALGPRAW--DHSHALLSASASTSLLLLAHTRAPEQPPV-- 765

Query: 270 LGGSPESGPR*R 235
                ESGP  R
Sbjct: 766 ---PTESGPESR 774

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>MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 350

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = -3

Query: 430 AGEQLGEDTTERAKHGPTAMDHLELPVLGEGLWVSRQSSGVPPVVTGELTGQVARGLTRK 251
           A E+ G D T    H  T  + L+   +   + +S  ++G+P ++T ++  + A  +   
Sbjct: 218 AHERPGGDATVTISHRYTPKEQLKKHTILADIVIS--AAGIPNLITADMIKEGAAVIDVG 275

Query: 250 WAEVEDPVRAVPRAAG 203
              V+DPV A P+  G
Sbjct: 276 INRVQDPVTAKPKLVG 291

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>PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 651

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
 Frame = -1

Query: 195 FLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAGEERDMV------VAAIVVDGGLVYAVF 34
           FL F+AV+RM    +P R+D      T  A +  E  +       +AA+     L     
Sbjct: 352 FLLFSAVIRMFNLKTPGREDKAADVVTEEANSNTEEGLTQLATSYIAAVGGTDNLKAIDA 411

Query: 33  CSPRMRSRCGD 1
           C  R+R   GD
Sbjct: 412 CITRLRLTVGD 422

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>HIS7_PEA (Q43072) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 281

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EATF AFA  LR  T   P+R
Sbjct: 243 HHIIEATFKAFARALRQATEYDPRR 267

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>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 143 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 42
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 451 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 484

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>NUP88_HUMAN (Q99567) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 741

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 143 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 42
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 450 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 483

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>HIS7_SYNEL (Q8DMI3) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EATF AFA  LRM     P+R
Sbjct: 173 HHIIEATFKAFARALRMAIALDPRR 197

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>NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 753

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 143 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 42
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 451 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 484

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>MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 344

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = -3

Query: 430 AGEQLGEDTTERAKHGPTAMDHLELPVLGEGLWVSRQSSGVPPVVTGELTGQVARGLTRK 251
           A E+ G D T    H  T  + L+   +   + +S  ++G+P ++T ++  + A  +   
Sbjct: 212 AHERPGGDATVTISHRYTPKEQLKKHTILADIVIS--AAGIPNLITADMIKEGAAVIDVG 269

Query: 250 WAEVEDPVRAVPRAAG 203
              V DPV A P+  G
Sbjct: 270 INRVHDPVTAKPKLVG 285

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>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           S  PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 125 SQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>HIS7_PROMA (Q7VDQ5) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAGE 94
           H ++EA F AFA  LRM   A P+R     S   +  +AG+
Sbjct: 163 HHIVEACFKAFAKSLRMAIEADPRRGGSIPSSKGVLEQAGD 203

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>TAOK2_XENLA (Q6GPK9) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2)
          Length = 1025

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 206  WRQPSWPLPPSCAW*REPPRKETTMAS 126
            WRQP+   PPS +W   PP   +++++
Sbjct: 935  WRQPTLLAPPSASWGLHPPGSSSSLSA 961

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>HIS7_TRIS1 (Q93DQ9) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 213

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EA F AFA  LRM T   P+R
Sbjct: 178 HHIIEAGFKAFARSLRMATEIDPRR 202

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>CNTRB_MOUSE (Q8CB62) Centrobin (LYST-interacting protein 8)|
          Length = 887

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 155 PPRKETTMASPSLP--CRQRLGKRGTWSLPPL 66
           PP  +  +A PS P       G+R TW++PP+
Sbjct: 569 PPNPQAPLAEPSSPGPLEPEKGERRTWAMPPM 600

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>PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
          Length = 399

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = +1

Query: 19  HSWRTKYSIHKTS----IDNNGGNDHVPLFPSLCRQGSEGLAIVVSFRGG 156
           H +   + + K S    ++N+G ++ +P    +  +G+E L+I +S RGG
Sbjct: 240 HLYHIMFELFKNSMRATVENHGADEDLPPIKVMVVRGAEDLSIKISDRGG 289

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>HPS6_HUMAN (Q86YV9) Hermansky-Pudlak syndrome 6 protein (Ruby-eye protein|
           homolog) (Ru)
          Length = 775

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -2

Query: 422 AAWGRHNRARQAWPNGNGSPRA---PGSWRRSLGQPTVQRCP 306
           AAWG   RA Q   +GNG  R+   P  W++ LG  T  + P
Sbjct: 516 AAWGATLRALQLQLDGNGKLRSQAPPDVWKKVLGGITAGKEP 557

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>CH60_STRR6 (P0A336) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 310 VPPVVTGELTGQVARGLTRKWAEVEDPVRAVPRAAG 203
           +P V T ELTG  A G       +E+PVR +   AG
Sbjct: 421 IPAVATLELTGDEATGRNIVLRALEEPVRQIAHNAG 456

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>CH60_STRPN (P0A335) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 310 VPPVVTGELTGQVARGLTRKWAEVEDPVRAVPRAAG 203
           +P V T ELTG  A G       +E+PVR +   AG
Sbjct: 421 IPAVATLELTGDEATGRNIVLRALEEPVRQIAHNAG 456

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>ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB-16)|
          Length = 453

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +3

Query: 63  QQWRQRPCPSLPQPLPAR**RTC-----HRRLFSGRL 158
           QQ R R CPS P+    R  R+C     H  LFSG L
Sbjct: 34  QQCRSRRCPSSPRARLTRPHRSCRDPAVHHALFSGNL 70

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>CYCG_RHOS4 (Q53143) Diheme cytochrome c-type|
          Length = 296

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 340 GLWVSRQSSGVPPVVTGELTGQVARGLTRKWAEVEDPVRAVPRAAG 203
           GLW++R     P +  G LTG+ +RG    WA       A P A+G
Sbjct: 19  GLWLTRPVKSDPELFAG-LTGEASRGERIFWAGGCASCHAAPDASG 63

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>HIS7_SYNPX (Q7U9M8) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 202

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EA F AF+  LRM T   P+R
Sbjct: 161 HHIVEACFKAFSRALRMATEIDPRR 185

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>HIS7_ANASP (Q05068) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 209

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EATF AFA   RM     P+R
Sbjct: 174 HHIIEATFKAFARAARMAIEVDPRR 198

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>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180

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>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)|
          Length = 567

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 242 GRGPGQSRTTGCWRQPSWPLPPSCAW-*REPPRKETTMASPSLPCRQR 102
           G  P  S  T  WR PS      CA   +EP + E++ AS    C ++
Sbjct: 205 GAVPAASPDTAAWRSPSEAADEVCALEEKEPQKNESSNASEEEACEKK 252

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>MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 337

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/74 (24%), Positives = 35/74 (47%)
 Frame = -3

Query: 424 EQLGEDTTERAKHGPTAMDHLELPVLGEGLWVSRQSSGVPPVVTGELTGQVARGLTRKWA 245
           E+ G D T    H  T  + L+   +   + V+  ++G+P ++T ++  + A  +     
Sbjct: 215 ERPGGDATVTISHRYTPKEQLKQHTIRADIVVA--AAGIPNLITADMIKEGAAVIDVGIT 272

Query: 244 EVEDPVRAVPRAAG 203
            V+DP+ A  R  G
Sbjct: 273 RVQDPITAKSRLVG 286

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331
           PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>ANKS3_RAT (Q5M9H0) Ankyrin repeat and SAM domain-containing protein 3|
          Length = 663

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 410 RHNRARQAWPNGNGSPRAPGSWRRSLGQPTVQRCP 306
           RHN +   WP+  G+ R PGS      +P  ++ P
Sbjct: 394 RHNNSDGHWPSSTGTARTPGS------EPQAEKSP 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,614,508
Number of Sequences: 219361
Number of extensions: 1621870
Number of successful extensions: 6058
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 5707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6042
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result