>12KD_FRAAN (Q05349) Auxin-repressed 12.5 kDa protein|
          Length = 111

 Score =  112 bits (280), Expect = 4e-25
 Identities = 58/124 (46%), Positives = 71/124 (57%)
 Frame = +3

Query: 48  MLEKLWDDVVAGPRPETGLEKLRKAATTRPLVINKDGDGEASGAAYKRXXXXXXXXXXXX 227
           +L+KLWDD+VAGP+PE GL  LRK     P  +N   +GE+S                  
Sbjct: 3   LLDKLWDDIVAGPQPERGLGMLRKV----PQPLNLKDEGESSKITMP------------- 45

Query: 228 XXXXXXXXXXXXXXXRGSNVWRSVFHPGSNLATKSLGANLFDRPQPNSPTVYDWLYSDET 407
                          R  NVWRSVFHPGSNL++K++G  +FD PQPNSPTVYDW+YS ET
Sbjct: 46  TTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSPQPNSPTVYDWMYSGET 105

Query: 408 RSSH 419
           RS H
Sbjct: 106 RSKH 109

>HIS6_PROMT (Q46GY9) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 256

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = +3

Query: 15  VVECVEAEIRKMLEKLWDDVVAGPRPETGL------EKLRKAATTRPLVINKDGDGEASG 176
           +V  ++A+  K +   WD  V+G R  TGL      EK+ +      L+ + DGDG  +G
Sbjct: 125 IVVAIDAKKNKNIPNKWDVYVSGGRNNTGLDAIEWAEKVFEMGAGEILLTSMDGDGTQNG 184

>LIN1_HUMAN (P08547) LINE-1 reverse transcriptase homolog|
          Length = 1259

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
 Frame = +1

Query: 31   KQRSGRCWRSCGT------TWWPGLDRRPAWRSSARPLQPAPL 141
            K  + RCWR CG        WW     +P W+S  R L+   L
Sbjct: 1123 KSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLEL 1165

>TXND6_HUMAN (Q86XW9) Thioredoxin domain-containing protein 6 (Thioredoxin-like|
           protein 2) (Txl-2)
          Length = 330

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 23  VRGSRDQEDAGEAVXXXXXXASTGDRPGEAPQG 121
           V GSRD+EDA   +          D+  EAPQG
Sbjct: 278 VHGSRDREDADRELALLFPSLKFSDKDTEAPQG 310

>HIS6_SYNY3 (P74106) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 261

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
 Frame = +3

Query: 63  WDDVVAGPRPETGL------EKLRKAATTRPLVINKDGDGEASG 176
           WD  V G R  TGL      E++ K      LV + DGDG  +G
Sbjct: 143 WDVYVRGGRENTGLDAIAWAEEVAKRGAGELLVTSMDGDGTQAG 186

>LEU3_RHOBA (Q7UIE1) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 359

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = +3

Query: 63  WDDVVAGPRPETGLEKLRKA----ATTRPL 140
           WDD  A  RPE GL K+RK     A  RP+
Sbjct: 79  WDDPSAKTRPEAGLLKIRKELGLFANLRPI 108

>PCX_DROME (P18490) Protein pecanex|
          Length = 3433

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -1

Query: 77   HHVVPQLLQHLPDLCF 30
            H++VPQ+ +H+P LCF
Sbjct: 1872 HYIVPQMRKHMPWLCF 1887

>FES_DICD3 (O51900) Enterochelin esterase (Ferric enterobactin esterase)|
          Length = 434

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 28  WKQRSGRCWRSCGTTWWPGL 87
           W QR GR     G+ WWP L
Sbjct: 316 WPQRFGRVLTQSGSFWWPNL 335


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,851,478
Number of Sequences: 219361
Number of extensions: 571122
Number of successful extensions: 2305
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)