ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet03h10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 90 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 149 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 150 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 209 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 269 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 270 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 329 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 330 cctcctcaagtacgactccacgctcggcatcttcgacgc 368
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full insert sequence Length = 1468 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 126 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 185 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 186 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 245 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 305 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 306 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 365 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 366 cctcctcaagtacgactccacgctcggcatcttcgacgc 404
>dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H03, full insert sequence Length = 1366 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 126 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 185 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 186 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 245 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 305 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 306 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 365 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 366 cctcctcaagtacgactccacgctcggcatcttcgacgc 404
>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full insert sequence Length = 1540 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 131 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 190 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 191 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 250 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 310 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 311 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 370 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 371 cctcctcaagtacgactccacgctcggcatcttcgacgc 409
>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full insert sequence Length = 1538 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 131 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 190 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 191 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 250 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 310 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 311 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 370 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 371 cctcctcaagtacgactccacgctcggcatcttcgacgc 409
>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full insert sequence Length = 1566 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 131 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 190 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 191 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 250 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 310 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 311 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 370 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 371 cctcctcaagtacgactccacgctcggcatcttcgacgc 409
>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full insert sequence Length = 1473 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 131 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 190 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 191 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 250 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 310 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 311 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 370 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 371 cctcctcaagtacgactccacgctcggcatcttcgacgc 409
>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full insert sequence Length = 1571 Score = 394 bits (199), Expect = e-107 Identities = 259/279 (92%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 127 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 186 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| Sbjct: 187 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggc 246 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gatcaacgggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 306 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 ||||||||| || || || |||||||||||||||||||||||||||||||||||||| || Sbjct: 307 cagctcgcccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgca 366 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||||||||||| |||||||||||||| Sbjct: 367 cctcctcaagtacgactccacgctcggcatcttcgacgc 405
>emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chloroplast GAPDH (GapA) glyceraldehyde-3-phosphate dehydrogenase Length = 1382 Score = 367 bits (185), Expect = 1e-98 Identities = 248/269 (92%) Strand = Plus / Plus Query: 11 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacatacgcggtgagc 70 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 43 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacccacgcggtcggc 102 Query: 71 acgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacggg 130 |||||||||||| ||||| ||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 103 acgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaacggg 162 Query: 131 ttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgccg 190 ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 163 ttcggccgcatcgggcgcaacttcctgcggtgctggcacggccgcggcgacgcctcgccc 222 Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 || || || |||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 223 ctcgatgtcatcgccatcaacgacaccggaggcgtcaagcaggcgtcccacctgctcaag 282 Query: 251 tacgactccacgctgggcatcttcgacgc 279 |||||||||||||| |||||||||||||| Sbjct: 283 tacgactccacgctcggcatcttcgacgc 311
>gb|AY103602.1| Zea mays PCO093211 mRNA sequence Length = 1490 Score = 367 bits (185), Expect = 1e-98 Identities = 248/269 (92%) Strand = Plus / Plus Query: 11 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacatacgcggtgagc 70 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 133 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacccacgcggtcggc 192 Query: 71 acgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacggg 130 |||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 193 acgagcggcgggtcgcggcgggcgccgacggaggcgaagctgaaggtggccatcaacggg 252 Query: 131 ttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgccg 190 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 253 ttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgccc 312 Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 || || || |||||||||||||||||||| || || ||||||||||||||||| |||||| Sbjct: 313 ctcgacgtcatcgccatcaacgacaccggcggtgtcaagcaggcgtcccacctgctcaag 372 Query: 251 tacgactccacgctgggcatcttcgacgc 279 |||||||||||||| |||||||||||||| Sbjct: 373 tacgactccacgctcggcatcttcgacgc 401
>gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogenase mRNA, 5' end Length = 386 Score = 345 bits (174), Expect = 5e-92 Identities = 243/266 (91%) Strand = Plus / Plus Query: 11 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacatacgcggtgagc 70 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 114 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacccacgcggtcggt 173 Query: 71 acgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacggg 130 |||||||||||| ||||| ||||||||||||||| ||||| |||| ||| ||||||||| Sbjct: 174 acgagcggcgggccgcggcgggcgccgacggaggcaaagctgaaggtggccatcaacggg 233 Query: 131 ttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgccg 190 ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 234 ttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcgtcgccc 293 Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 || || || |||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 294 ctcgacgtcatcgccatcaacgacaccggaggcgtcaagcaggcgtcccacctgctcaag 353 Query: 251 tacgactccacgctgggcatcttcga 276 |||||||||||||| ||||||||||| Sbjct: 354 tacgactccacgctcggcatcttcga 379
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 323 bits (163), Expect = 2e-85 Identities = 199/211 (94%) Strand = Plus / Plus Query: 69 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacg 128 |||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 120991 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 121050 Query: 129 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121051 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 121110 Query: 189 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 248 | || || || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 121111 ccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctca 121170 Query: 249 agtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||| |||||||||||||| Sbjct: 121171 agtacgactccacgctcggcatcttcgacgc 121201 Score = 83.8 bits (42), Expect = 3e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 120824 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 120883 Query: 61 cgcggt 66 |||||| Sbjct: 120884 cgcggt 120889
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 323 bits (163), Expect = 2e-85 Identities = 199/211 (94%) Strand = Plus / Plus Query: 69 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacg 128 |||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 6672 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 6731 Query: 129 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6732 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 6791 Query: 189 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 248 | || || || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6792 ccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctca 6851 Query: 249 agtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||| |||||||||||||| Sbjct: 6852 agtacgactccacgctcggcatcttcgacgc 6882 Score = 83.8 bits (42), Expect = 3e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 6505 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 6564 Query: 61 cgcggt 66 |||||| Sbjct: 6565 cgcggt 6570
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 323 bits (163), Expect = 2e-85 Identities = 199/211 (94%) Strand = Plus / Plus Query: 69 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacg 128 |||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 22912216 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 22912275 Query: 129 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22912276 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 22912335 Query: 189 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 248 | || || || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 22912336 ccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctca 22912395 Query: 249 agtacgactccacgctgggcatcttcgacgc 279 |||||||||||||||| |||||||||||||| Sbjct: 22912396 agtacgactccacgctcggcatcttcgacgc 22912426 Score = 83.8 bits (42), Expect = 3e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 22912049 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 22912108 Query: 61 cgcggt 66 |||||| Sbjct: 22912109 cgcggt 22912114
>emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 6414 Score = 278 bits (140), Expect = 9e-72 Identities = 191/208 (91%) Strand = Plus / Plus Query: 69 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacg 128 |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| ||||| | Sbjct: 1985 gcacgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaatg 2044 Query: 129 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 188 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2045 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgc 2104 Query: 189 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 248 | || || || |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2105 ccctcgacgtcatcgccatcaacgacaccggaggcgtcaagcaggcgtcccacctgctca 2164 Query: 249 agtacgactccacgctgggcatcttcga 276 |||||||||||||||| ||||||||||| Sbjct: 2165 agtacgactccacgctcggcatcttcga 2192 Score = 95.6 bits (48), Expect = 7e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 11 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacatacgcggt 66 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1745 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacccacgcggt 1800
>gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosphate dehydrogenase gene, complete cds, clone lambda-gapA1 Length = 6414 Score = 278 bits (140), Expect = 9e-72 Identities = 191/208 (91%) Strand = Plus / Plus Query: 69 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggcgatcaacg 128 |||||||||||||| ||||| ||||||||||||||||||||| |||| ||| ||||| | Sbjct: 1985 gcacgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaatg 2044 Query: 129 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 188 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2045 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgc 2104 Query: 189 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 248 | || || || |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2105 ccctcgacgtcatcgccatcaacgacaccggaggcgtcaagcaggcgtcccacctgctca 2164 Query: 249 agtacgactccacgctgggcatcttcga 276 |||||||||||||||| ||||||||||| Sbjct: 2165 agtacgactccacgctcggcatcttcga 2192 Score = 95.6 bits (48), Expect = 7e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 11 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacatacgcggt 66 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1745 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacccacgcggt 1800
>gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate dehydrogenase subunit (GAPDH) mRNA, partial cds Length = 1073 Score = 260 bits (131), Expect = 2e-66 Identities = 242/279 (86%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||| |||||||||||||| |||||||| | | |||||||||||||| | Sbjct: 134 gccgctgcggcgggatgccacctccgacaacttcatgaacccggtctccttcaggaccca 193 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggcggc 120 |||||| |||||| ||||||| ||||| |||||| |||||||| || || |||| ||| Sbjct: 194 cgcggttggcacgaacggcggggcgcggcgggcgcccacggaggcaaaactgaaggtggc 253 Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 254 gatcaacgggttcggccgcttcgggcgcaacttcctgcggtgctggcacgggcgcggtga 313 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 | ||||| || | | ||| |||||||||||||||||||||||||||||||||| || Sbjct: 314 cgattcgcccctcaacatcatccccatcaacgacaccggaggcgtgaagcaggcgtcgca 373 Query: 241 cctcctcaagtacgactccacgctgggcatcttcgacgc 279 || |||||||||| |||||||||| |||||||||||||| Sbjct: 374 ccgcctcaagtacaactccacgctcggcatcttcgacgc 412
>emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 5922 Score = 256 bits (129), Expect = 3e-65 Identities = 174/189 (92%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 |||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||| Sbjct: 2030 ggcgccgacggaggcgaagctcaaggtggccataaacgggttcggccgcatcgggcgcaa 2089 Query: 151 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 210 ||||||||||||||||||||||||||||||| |||||| || || || ||||||||||| Sbjct: 2090 cttcctgcggtgctggcacgggcgcggcgacgactcgcccctcgacgtcatcgccatcaa 2149 Query: 211 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcat 270 ||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2150 cgacaccgggggcgtcaagcaggcgtcgcacctgctcaagtacgactccacgctcggcat 2209 Query: 271 cttcgacgc 279 ||||||||| Sbjct: 2210 cttcgacgc 2218 Score = 95.6 bits (48), Expect = 7e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 11 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacatacgcggt 66 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1784 cggaatgccacctccgacgacttcatgtccgccgtctccttcaggacccacgcggt 1839
>gb|AF010582.1|AF010582 Oryza sativa glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA, partial cds Length = 804 Score = 212 bits (107), Expect = 4e-52 Identities = 134/143 (93%) Strand = Plus / Plus Query: 137 cgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggag 196 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || || Sbjct: 7 cgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcaacagctcgcccctcgac 66 Query: 197 gtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgac 256 || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 67 gtcatcgccatcaacaacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacaac 126 Query: 257 tccacgctgggcatcttcgacgc 279 |||||||| |||||||||||||| Sbjct: 127 tccacgctcggcatcttcgacgc 149
>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 8839 Score = 210 bits (106), Expect = 2e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||||| || Sbjct: 5211 ggcgccgacagaggcaaagctcaaggtggccatcaacgggttcggtcgcatcgggcgtaa 5270 Query: 151 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 210 |||||||||||||||||||||||||| |||| |||||| || || || ||||||||||| Sbjct: 5271 cttcctgcggtgctggcacgggcgcgacgacgactcgcccctcgacgtcatcgccatcaa 5330 Query: 211 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcat 270 ||||||||| ||||| ||||||||||| ||||| ||||||||| |||||| ||| ||||| Sbjct: 5331 cgacaccgggggcgtcaagcaggcgtcgcacctgctcaagtacaactccatgctcggcat 5390 Query: 271 cttcga 276 |||||| Sbjct: 5391 cttcga 5396 Score = 81.8 bits (41), Expect = 1e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 12 ggaatgccacctccgacgacttcatgtccgccgtctccttcagga 56 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4956 ggaatgccacctccgacgaattcatgtccgccgtctccttcagga 5000
>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full insert sequence Length = 778 Score = 123 bits (62), Expect = 3e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 1 gccgctccggcggaatgccacctccgacgacttcatgtccgccgtctccttcaggacata 60 |||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 132 gccgctgcggcggaatgccacctccgacgacttcatgaacgcggtctccttcaggaccca 191 Query: 61 cgcggtgagcacgagcggcgggtcgcggaaggcgccgacggaggcg 106 |||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 192 cgcggttggcacgagcggcggggcgcggcgggcgccgacggaggcg 237
>gb|DQ270265.1| Mesostigma viride glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1437 Score = 109 bits (55), Expect = 5e-21 Identities = 126/149 (84%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 121 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 180 ||||||||||||||||||||| || |||||||||||||||||||||||||| | | || Sbjct: 3 gatcaacgggttcgggcgcattggccgcaacttcctgcggtgctggcacggtc---ggga 59 Query: 181 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 240 | |||||| || ||||| |||||||||||||| | || || || ||||||||||| || Sbjct: 60 gaactcgcctctcgaggttgtcgccatcaacgactctggtggggttaagcaggcgtctca 119 Query: 241 cctcctcaagtacgactccacgctgggca 269 |||||| ||||| ||||||| ||| |||| Sbjct: 120 cctcctgaagtatgactccatgctcggca 148
>gb|DQ270269.1| Mesostigma viride glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds Length = 1481 Score = 103 bits (52), Expect = 3e-19 Identities = 132/158 (83%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 101 gaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 160 |||||||||||||||| || ||||| || ||||| ||||||||||||||||||||||| Sbjct: 158 gaggcgaagctcaaggttgccatcaatggcttcggccgcatcgggcgcaacttcctgcgc 217 Query: 161 tgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaacgacaccgga 220 |||||| | | || |||| | ||| || || |||||| |||| |||||||||| ||| Sbjct: 218 tgctgg---gtgggccgcgagaactctcccctcgaggtggtcgcgatcaacgacagcggc 274 Query: 221 ggcgtgaagcaggcgtcccacctcctcaagtacgactc 258 || |||||||||||| | ||||| |||||||||||||| Sbjct: 275 ggggtgaagcaggcggcgcacctgctcaagtacgactc 312
>gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 Score = 103 bits (52), Expect = 3e-19 Identities = 132/158 (83%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 101 gaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 160 ||||||||||| |||| |||||||||||| ||||| |||||||| || |||||||| ||| Sbjct: 479 gaggcgaagctgaaggtggcgatcaacggcttcggccgcatcggccggaacttcctccgg 538 Query: 161 tgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaacgacaccgga 220 ||||||||||| |||| || ||||||| | || || ||| | | ||||||| |||| Sbjct: 539 tgctggcacggccgcgagga---ctcgccgatcgacgtcgtcgtcgtgaacgacagcgga 595 Query: 221 ggcgtgaagcaggcgtcccacctcctcaagtacgactc 258 ||||| | | | |||||||||||||||||||||||||| Sbjct: 596 ggcgtcaggaacgcgtcccacctcctcaagtacgactc 633
>gb|DQ270268.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds Length = 1444 Score = 99.6 bits (50), Expect = 5e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgac 181 |||||||| ||||| ||||| || ||||||||||| || ||||||||||| ||||| || Sbjct: 288 atcaacggcttcggacgcattggtcgcaacttcctccgctgctggcacggtcgcggtgat 347 Query: 182 agctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccac 241 | ||||| || || ||||||||||||||| ||||||| || |||||||| | ||| Sbjct: 348 gacagcccgctcgaagtcatcgccatcaacgactccggaggtgtcaagcaggccactcac 407 Query: 242 ctcctcaagtacgactccacgctgggcatcttcgacgc 279 ||||||||||||||||||| ||| |||| |||| |||| Sbjct: 408 ctcctcaagtacgactccatgctcggcaccttcaacgc 445
>gb|DQ270262.1| Chara vulgaris glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 956 Score = 99.6 bits (50), Expect = 5e-18 Identities = 56/58 (96%) Strand = Plus / Plus Query: 203 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 260 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 88 gccatcaacgacaccggaggagtgaagcaggcctcccacctcctcaagtacgactcca 145
>ref|XM_493811.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 83.8 bits (42), Expect = 3e-13 Identities = 137/168 (81%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 213 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 272 Query: 151 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 210 |||||| ||||||||||||| | |||| | ||| ||||| ||||| ||| | |||| Sbjct: 273 cttcctccggtgctggcacgaac---gcgagaactccccgctcgaggtcgtcgtcgtcaa 329 Query: 211 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactc 258 ||||| ||||||||| | | | || || ||||| |||||||||||||| Sbjct: 330 cgacagcggaggcgtcaggaacgcatcacaccttctcaagtacgactc 377
>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full insert sequence Length = 1668 Score = 83.8 bits (42), Expect = 3e-13 Identities = 137/168 (81%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 268 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 327 Query: 151 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 210 |||||| ||||||||||||| | |||| | ||| ||||| ||||| ||| | |||| Sbjct: 328 cttcctccggtgctggcacgaac---gcgagaactccccgctcgaggtcgtcgtcgtcaa 384 Query: 211 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactc 258 ||||| ||||||||| | | | || || ||||| |||||||||||||| Sbjct: 385 cgacagcggaggcgtcaggaacgcatcacaccttctcaagtacgactc 432
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 79.8 bits (40), Expect = 4e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 1643182 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 1643241 Query: 151 cttcctgcggtgctggcacg 170 |||||| ||||||||||||| Sbjct: 1643242 cttcctccggtgctggcacg 1643261
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 79.8 bits (40), Expect = 4e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 50628 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 50687 Query: 151 cttcctgcggtgctggcacg 170 |||||| ||||||||||||| Sbjct: 50688 cttcctccggtgctggcacg 50707
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 79.8 bits (40), Expect = 4e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 122743 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 122802 Query: 151 cttcctgcggtgctggcacg 170 |||||| ||||||||||||| Sbjct: 122803 cttcctccggtgctggcacg 122822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 79.8 bits (40), Expect = 4e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 1643180 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 1643239 Query: 151 cttcctgcggtgctggcacg 170 |||||| ||||||||||||| Sbjct: 1643240 cttcctccggtgctggcacg 1643259
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 79.8 bits (40), Expect = 4e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 91 ggcgccgacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||| | |||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 55645 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 55704 Query: 151 cttcctgcggtgctggcacg 170 |||||| ||||||||||||| Sbjct: 55705 cttcctccggtgctggcacg 55724
>gb|DQ270263.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1239 Score = 77.8 bits (39), Expect = 2e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 |||||| || |||||||||||||||||||||| || |||||||| || ||||| || ||| Sbjct: 76 ctggagctggtcgccatcaacgacaccggaggtgtcaagcaggcctctcacctgctgaag 135 Query: 251 tacgactccacgctgggca 269 |||||||||| ||| |||| Sbjct: 136 tacgactccatgctcggca 154
>gb|DQ270259.1| Scherffelia dubia glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds Length = 1210 Score = 75.8 bits (38), Expect = 7e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 112 caaggcggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 171 ||||| ||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 172 caaggtggccatcaacggcttcggccgcatcggccgcaacttcctgcgctgctggcacgg 231 Query: 172 gcgcgg 177 ||||| Sbjct: 232 ccgcgg 237 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 203 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 261 |||||||||||| |||| || ||||||||||| |||||||| || |||||||||||||| Sbjct: 263 gccatcaacgactccggcggtgtgaagcaggcctcccacctgctgaagtacgactccac 321
>emb|AJ246027.2|MPO246027 Marchantia polymorpha mRNA for glyceraldehyde-3-phosphate dehydrogenase, subunit GapB Length = 1770 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcgg 177 |||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 341 atcaacgggttcggtcgtatcggtcgcaacttcctgcgctgctggcacggacgcgg 396
>emb|AJ252208.1|CFU252208 Scenedesmus vacuolatus partial mRNA for NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (phosphorylating), (gapA gene) Length = 941 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 ||||||||||| |||||||||||| |||| |||||||||||||| |||||| || ||| Sbjct: 64 ctggaggtgattgccatcaacgactccggtggcgtgaagcaggccagccacctgctgaag 123 Query: 251 tacgactc 258 |||||||| Sbjct: 124 tacgactc 131
>dbj|AK109016.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A07, full insert sequence Length = 1712 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 203 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacg 262 |||||||||||| |||| || ||||||||||| |||||| ||||||||||||||||| Sbjct: 259 gccatcaacgactccggtggtgtgaagcaggccagccacctgctcaagtacgactccacc 318 Query: 263 ctgggca 269 ||||||| Sbjct: 319 ctgggca 325
>dbj|AB035312.1| Chlamydomonas sp. W80 gap-1 mRNA for NADP-glyceraldehyde-3-phosphate dehydrogenase, complete cds Length = 1311 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 206 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctg 265 ||||||||| | || || || ||||||||||| ||||| |||||||||||||||| ||| Sbjct: 227 atcaacgactcgggcggtgtcaagcaggcgtcgcacctgctcaagtacgactccatcctg 286 Query: 266 ggcatcttcgacgc 279 |||| ||||||||| Sbjct: 287 ggcaccttcgacgc 300
>gb|L27668.1|CRECPGAPA Chlamydomonas reinhardtii chloroplast glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, complete cds Length = 2219 Score = 67.9 bits (34), Expect = 2e-08 Identities = 120/148 (81%), Gaps = 3/148 (2%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgac 181 |||||||| ||||| ||||| || |||||||||||||| ||||||||||| | || | Sbjct: 619 atcaacggcttcggtcgcattggccgcaacttcctgcgctgctggcacggtc---gccag 675 Query: 182 agctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccac 241 | | | | |||||| ||| | ||||||||||||| ||| || || |||||||| |||| Sbjct: 676 aacaccctgctggacgtggttgccatcaacgacagcggcggtgtcaagcaggccagccac 735 Query: 242 ctcctcaagtacgactccacgctgggca 269 || || |||||||||||||| ||||||| Sbjct: 736 ctgctgaagtacgactccaccctgggca 763
>gb|DQ270267.1| Physcomitrella patens glyceraldehyde-3-phosphate dehydrogenase subunit A2 (gapA2) mRNA, partial cds Length = 1238 Score = 65.9 bits (33), Expect = 6e-08 Identities = 33/33 (100%) Strand = Plus / Plus Query: 205 catcaacgacaccggaggcgtgaagcaggcgtc 237 ||||||||||||||||||||||||||||||||| Sbjct: 54 catcaacgacaccggaggcgtgaagcaggcgtc 86
>gb|DQ122925.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA) gene, partial cds; nuclear gene for chloroplast product Length = 1772 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 190 gctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaa 249 |||||| ||| ||||||||||||||| ||| || || |||||||| |||||| || || Sbjct: 328 gctggacgtggtcgccatcaacgacagcggcggtgtcaagcaggccagccacctgctgaa 387 Query: 250 gtacgactccacgctgggca 269 |||||||||||| ||||||| Sbjct: 388 gtacgactccaccctgggca 407
>gb|DQ122894.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA) mRNA, partial cds; nuclear gene for chloroplast product Length = 1708 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 190 gctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaa 249 |||||| ||| ||||||||||||||| ||| || || |||||||| |||||| || || Sbjct: 174 gctggacgtggtcgccatcaacgacagcggcggtgtcaagcaggccagccacctgctgaa 233 Query: 250 gtacgactccacgctgggca 269 |||||||||||| ||||||| Sbjct: 234 gtacgactccaccctgggca 253
>gb|DQ270266.1| Physcomitrella patens glyceraldehyde-3-phosphate dehydrogenase subunit A1 (gapA1) mRNA, partial cds Length = 1444 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 205 catcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 260 |||||| ||||||||||| ||||||||||| || ||||| || ||||||||||||| Sbjct: 219 catcaatgacaccggaggtgtgaagcaggcctctcacctgctgaagtacgactcca 274
>gb|DQ301767.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1330 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 209 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 268 |||||| |||| || ||||||||||| || ||||| || ||||||||| ||||||||||| Sbjct: 220 aacgactccggcggtgtgaagcaggcctctcacctgctgaagtacgacaccacgctgggc 279 Query: 269 atcttcgacgc 279 | |||||||| Sbjct: 280 aagttcgacgc 290 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 166 |||||||| ||||| ||||| || |||||||||||||| |||||| Sbjct: 136 atcaacggcttcggccgcattggccgcaacttcctgcgctgctgg 180
>gb|DQ301766.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1478 Score = 61.9 bits (31), Expect = 1e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 209 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 268 |||||| |||| || ||||||||||| || ||||| || ||||||||| ||||||||||| Sbjct: 226 aacgactccggcggtgtgaagcaggcctctcacctgctgaagtacgacaccacgctgggc 285 Query: 269 atcttcgacgc 279 | |||||||| Sbjct: 286 aagttcgacgc 296 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 166 |||||||| ||||| ||||| || |||||||||||||| |||||| Sbjct: 142 atcaacggcttcggccgcattggccgcaacttcctgcgctgctgg 186
>emb|AJ246029.2|KFL246029 Klebsormidium flaccidum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 949 Score = 61.9 bits (31), Expect = 1e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 206 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 260 ||||||||||||||||| || |||||||| |||||| | || ||||||||||||| Sbjct: 93 atcaacgacaccggaggtgtcaagcaggcctcccacttgctgaagtacgactcca 147 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Plus Query: 128 gggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 171 ||||||||| | || |||||||||||||| ||||||||| |||| Sbjct: 18 gggttcgggaggattgggcgcaacttcctccggtgctggaacgg 61
>emb|AJ246009.1|CAN246009 Capsicum annuum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA2 Length = 936 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 203 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacg 262 |||||||| ||| | ||||| || ||||| || || |||||||||||||||||||| || Sbjct: 82 gccatcaatgactctggaggtgtcaagcaagcctctcacctcctcaagtacgactctacc 141 Query: 263 ctgggcatcttcgacgc 279 || |||||||| ||||| Sbjct: 142 cttggcatctttgacgc 158
>emb|AJ246031.1|SCU246031 Sphagnum cuspidatum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA1 Length = 956 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 227 aagcaggcgtcccacctcctcaagtacgactccacgctgggca 269 |||||||| ||||||||||| |||||||| |||| |||||||| Sbjct: 112 aagcaggcatcccacctcctgaagtacgattccatgctgggca 154
>emb|AJ246030.1|SSP246030 Spirogyra sp. mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 956 Score = 54.0 bits (27), Expect = 2e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 200 atcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcc 259 ||||||||||||||||| ||||| || || || || |||| |||||||||||||| ||| Sbjct: 85 atcgccatcaacgacactggaggagttaaacaagccgcccatctcctcaagtacgattcc 144 Query: 260 acgctgggcatcttc 274 | ||| || |||||| Sbjct: 145 atgctcggaatcttc 159
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 54.0 bits (27), Expect = 2e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 203 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 261 |||||||||||||||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct: 17907 gccatcaacgacaccggaggtgtaaagcaagcctctcaccttctcaagtatgattccac 17849
>gb|L76552.1|SPIGDND Spinacia oleracea NADP-dependent glyceraldehydephosphate dehydrogenase subunit A mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 1397 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 206 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 260 ||||||||||| ||||| ||||| || || |||||||| || ||||||||||||| Sbjct: 328 atcaacgacactggaggtgtgaaacaagcttcccaccttctaaagtacgactcca 382
>gb|DQ224370.1| Glycine max glyceraldehyde-3-phosphate dehydrogenase A subunit mRNA, complete cds Length = 1212 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 203 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 260 ||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||| Sbjct: 295 gccatcaacgacaccggcggcgtgaaacaagcctctcaccttctcaaatacgattcca 352
>emb|AJ246026.1|MPO246026 Marchantia polymorpha mRNA for glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 1443 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 192 tggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagt 251 ||||||| ||| |||||||||||||||||| || ||||| || |||||| | || |||| Sbjct: 291 tggaggtcgtcgtcatcaacgacaccggaggtgtcaagcaagcctcccacttgctgaagt 350 Query: 252 acgactccacgctgggcatctt 273 |||| |||| ||| || ||||| Sbjct: 351 acgattccatgctcggtatctt 372
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 166 |||||||| |||||| | ||||||||||||||| |||| |||||| Sbjct: 567772 atcaacggcttcgggaggatcgggcgcaacttcttgcgctgctgg 567816
>gb|DQ270258.1| Cyanophora paradoxa glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds Length = 1442 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 201 tcgccatcaacgacaccggaggcg 224 |||||||||||||||||||||||| Sbjct: 320 tcgccatcaacgacaccggaggcg 343 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 123 tcaacgggttcgggcgcatcgggcgcaacttc 154 ||||||| ||||||||||| || ||||||||| Sbjct: 245 tcaacggcttcgggcgcattggccgcaacttc 276
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 48.1 bits (24), Expect = 0.015 Identities = 30/32 (93%) Strand = Plus / Minus Query: 119 gcgatcaacgggttcgggcgcatcgggcgcaa 150 ||||||||||| ||||| |||||||||||||| Sbjct: 2085722 gcgatcaacggtttcggacgcatcgggcgcaa 2085691
>emb|X16595.1|TAYT1GAP Thermus aquaticus gap gene for glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Length = 1393 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 237 cccacctcctcaagtacgactcca 260 |||||||||||||||||||||||| Sbjct: 407 cccacctcctcaagtacgactcca 430
>emb|AJ246032.1|SCU246032 Sphagnum cuspidatum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA2 Length = 852 Score = 46.1 bits (23), Expect = 0.059 Identities = 38/43 (88%) Strand = Plus / Plus Query: 227 aagcaggcgtcccacctcctcaagtacgactccacgctgggca 269 |||||||| ||||||||||| || ||||| |||| |||||||| Sbjct: 9 aagcaggcatcccacctcctgaaatacgattccatgctgggca 51
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.23 Identities = 37/42 (88%) Strand = Plus / Minus Query: 119 gcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 160 ||||||||||| ||||| |||||||| |||| | |||||||| Sbjct: 933500 gcgatcaacggattcggccgcatcggccgcaccatcctgcgg 933459
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 122 atcaacgggttcgggcgcatcgggcgcaac 151 |||||||| ||||| ||||||||||||||| Sbjct: 264340 atcaacggattcggccgcatcgggcgcaac 264311
>gb|AY273819.1| Porphyra yezoensis glyceraldehyde-3-phosphate dehydrogenase subunit A (GAPA) mRNA, complete cds Length = 1404 Score = 44.1 bits (22), Expect = 0.23 Identities = 46/54 (85%) Strand = Plus / Plus Query: 106 gaagctcaaggcggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcg 159 ||||||||||| ||| |||| ||| || || ||||| || |||||||||||||| Sbjct: 317 gaagctcaaggtggctatcagcggctttggccgcattggccgcaacttcctgcg 370
>gb|U44856.1|SAU44856 Streptomyces arenae pentalenolactone-insensitive glyceraldehyde-3-phosphate dehydrogenase (gapR) gene, complete cds Length = 1594 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaac 151 |||||||| |||||||||||||| |||||| Sbjct: 373 atcaacggcttcgggcgcatcggccgcaac 402
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cagctcgccgctggaggtgatcgcc 205 |||||||||||||| |||||||||| Sbjct: 5278875 cagctcgccgctggtggtgatcgcc 5278899
>emb|AJ318383.1|SSP318383 Spirulina sp. PCC 6313 partial gap2 gene for NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase Length = 939 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 ctcaagtacgactccacgctgggca 269 |||||||||||||||| |||||||| Sbjct: 118 ctcaagtacgactccatgctgggca 142
>emb|AJ252120.1|PSP252120 Pseudanabaena sp. strain PCC 6903 partial gap2 gene for NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) Length = 938 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 ctcaagtacgactccacgctgggca 269 |||||||||||||||| |||||||| Sbjct: 118 ctcaagtacgactccatgctgggca 142
>gb|AE005686.1| Caulobacter crescentus CB15 section 12 of 359 of the complete genome Length = 11992 Score = 42.1 bits (21), Expect = 0.93 Identities = 33/37 (89%) Strand = Plus / Plus Query: 195 aggtgatcgccatcaacgacaccggaggcgtgaagca 231 |||||||| ||||| |||||||| |||||||||||| Sbjct: 7629 aggtgatcttcatcaccgacaccgaaggcgtgaagca 7665
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gcgcggcgacagctcgccgct 192 ||||||||||||||||||||| Sbjct: 1843399 gcgcggcgacagctcgccgct 1843379
>gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosphate dehydrogenase homolog (gapdh) gene, complete cds; and phosphoglycerate kinase gene, partial cds Length = 2530 Score = 42.1 bits (21), Expect = 0.93 Identities = 30/33 (90%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttc 154 |||||||| ||||| || ||||||||||||||| Sbjct: 360 atcaacggcttcggtcgaatcgggcgcaacttc 392
>gb|AE004716.1| Pseudomonas aeruginosa PAO1, section 277 of 529 of the complete genome Length = 11610 Score = 42.1 bits (21), Expect = 0.93 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cagctcgccgctggaggtgatcgcc 205 |||||||||||||| |||||||||| Sbjct: 8192 cagctcgccgctggtggtgatcgcc 8216
>gb|AF162202.1|AF162202 Lactuca sativa NADP-dependent glyceraldehyde phosphate dehydrogenase, partial cds Length = 350 Score = 42.1 bits (21), Expect = 0.93 Identities = 51/61 (83%) Strand = Plus / Plus Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 ||||| || |||||||| ||||||||||| || || || || || |||||||| |||||| Sbjct: 290 ctggatgtcatcgccattaacgacaccggcggtgtcaaacaagcatcccaccttctcaag 349 Query: 251 t 251 | Sbjct: 350 t 350 Score = 40.1 bits (20), Expect = 3.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 97 gacggaggcgaagctcaaggcggcgatcaacgggttcgggcgcatcgg 144 |||||| || ||||| |||| ||||||||||| |||||||| ||||| Sbjct: 199 gacggaagcaaagctgaaggtagcgatcaacggattcgggcgtatcgg 246
>gb|AF162198.1|AF162198 Lactuca sativa NADP-dependent glyceraldehyde phosphate dehydrogenase mRNA, partial cds Length = 447 Score = 42.1 bits (21), Expect = 0.93 Identities = 51/61 (83%) Strand = Plus / Plus Query: 191 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 250 ||||| || |||||||| ||||||||||| || || || || || |||||||| |||||| Sbjct: 387 ctggatgtcatcgccattaacgacaccggcggtgtcaaacaagcatcccaccttctcaag 446 Query: 251 t 251 | Sbjct: 447 t 447
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 cgcggtgagcacgagcggcgg 81 ||||||||||||||||||||| Sbjct: 1509597 cgcggtgagcacgagcggcgg 1509577
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 0.93 Identities = 30/33 (90%) Strand = Plus / Plus Query: 122 atcaacgggttcgggcgcatcgggcgcaacttc 154 |||||||| ||||| || ||||||||||||||| Sbjct: 1221918 atcaacggcttcggtcgaatcgggcgcaacttc 1221950
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 0.93 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 tcgccgctggaggtgatcgcc 205 ||||||||||||||||||||| Sbjct: 118648 tcgccgctggaggtgatcgcc 118628
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 atcaacgggttcgggcgcatcgggcgca 149 |||||||| ||||| ||||||||||||| Sbjct: 3113498 atcaacggcttcggccgcatcgggcgca 3113471
>emb|X52148.1|CHPSGPA1 Pisum sativum gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase, subunit A Length = 3696 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 206 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 261 ||||| ||||||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct: 2153 atcaatgacaccggaggtgtaaagcaagcttctcaccttctcaagtatgattccac 2208
>emb|X15190.1|PSGAPA1 Pea chloroplast GAPA mRNA encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) subunit A (EC 1.2.1.13) Length = 1480 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 206 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 261 ||||| ||||||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct: 366 atcaatgacaccggaggtgtaaagcaagcttctcaccttctcaagtatgattccac 421
>gb|L81176.2|PSEFLAOP Pseudomonas aeruginosa flagellin (fliC) gene, partial cds; FlaG (flaG), flagellar cap (fliD), FliS (fliS), and FleQ (fleQ) genes, complete cds; and unknown genes Length = 5735 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gaaggcgccgacggaggcgaagctcaag 115 ||||||||||| ||||||| |||||||| Sbjct: 1406 gaaggcgccgaaggaggcgcagctcaag 1433
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gaggtgatcgccatcaacga 213 |||||||||||||||||||| Sbjct: 4171968 gaggtgatcgccatcaacga 4171987
>gb|AF139825.1|AF139825 Pseudomonas aeruginosa strain PA103 flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2047 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gaaggcgccgacggaggcgaagctcaag 115 ||||||||||| ||||||| |||||||| Sbjct: 221 gaaggcgccgaaggaggcgcagctcaag 248
>gb|AF139824.1|AF139824 Pseudomonas aeruginosa strain PAK flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2095 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gaaggcgccgacggaggcgaagctcaag 115 ||||||||||| ||||||| |||||||| Sbjct: 242 gaaggcgccgaaggaggcgcagctcaag 269
>gb|AF139823.1|AF139823 Pseudomonas aeruginosa strain cs2 flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2049 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gaaggcgccgacggaggcgaagctcaag 115 ||||||||||| ||||||| |||||||| Sbjct: 222 gaaggcgccgaaggaggcgcagctcaag 249
>gb|AF139822.1|AF139822 Pseudomonas aeruginosa strain cs32 flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2053 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 88 gaaggcgccgacggaggcgaagctcaag 115 ||||||||||| ||||||| |||||||| Sbjct: 222 gaaggcgccgaaggaggcgcagctcaag 249
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 122 atcaacgggttcgggcgcatcgggcgca 149 |||||||| ||||| ||||||||||||| Sbjct: 2960727 atcaacggcttcggccgcatcgggcgca 2960700
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gaggtgatcgccatcaacga 213 |||||||||||||||||||| Sbjct: 4175389 gaggtgatcgccatcaacga 4175408
>dbj|AB095184.1| Cyanidioschyzon merolae gene for Glyceraldehyde 3 phosphate dehydrogenase, complete cds Length = 1023 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cctcaagtacgactccacgc 263 |||||||||||||||||||| Sbjct: 144 cctcaagtacgactccacgc 163
>gb|DQ248961.1| Streptomyces davawensis putative RNA polymerase ECF-subfamily sigma factor, putative chitinase precursor, putative riboflavin synthase, putative integral membrane protein, putative dihydroxybutanonphosphate synthase/GTP-cyclohydrolase II, putative 6,7-dimethyl-8-ribityllumazine synthase, and putative phosphoribosyl-ATP-pyrophosphatase genes, complete cds Length = 7320 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 caagtacgactccacgctgg 266 |||||||||||||||||||| Sbjct: 1918 caagtacgactccacgctgg 1899
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 3.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 118 ggcgatcaacgggttcgggcgcatcgggcgca 149 |||||||||||| ||||| |||||||| |||| Sbjct: 2308630 ggcgatcaacggcttcggacgcatcggccgca 2308661 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,533,408 Number of Sequences: 3902068 Number of extensions: 1533408 Number of successful extensions: 28077 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27153 Number of HSP's gapped (non-prelim): 924 length of query: 281 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 259 effective length of database: 17,147,199,772 effective search space: 4441124740948 effective search space used: 4441124740948 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
