| Clone Name | baet03g09 |
|---|---|
| Clone Library Name | barley_pub |
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 155 bits (391), Expect = 3e-38 Identities = 71/74 (95%), Positives = 72/74 (97%) Frame = +1 Query: 94 LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273 LHQTTSFLGTAPRRD+LVR VGD GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS Sbjct: 6 LHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 65 Query: 274 YLTGEFPGDYGWDT 315 YLTGEFPGDYGWDT Sbjct: 66 YLTGEFPGDYGWDT 79
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 120 bits (300), Expect = 1e-27 Identities = 57/75 (76%), Positives = 65/75 (86%), Gaps = 3/75 (4%) Frame = +1 Query: 100 QTTSFLGTA--PRRDDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270 Q ++F+G A +++ +R VG+FG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTP Sbjct: 7 QQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 67 SYLTGEFPGDYGWDT 81
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 119 bits (298), Expect = 2e-27 Identities = 51/61 (83%), Positives = 58/61 (95%) Frame = +1 Query: 133 RDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312 +++LVR VG GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD Sbjct: 20 QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79 Query: 313 T 315 T Sbjct: 80 T 80
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 117 bits (292), Expect = 1e-26 Identities = 56/75 (74%), Positives = 62/75 (82%), Gaps = 3/75 (4%) Frame = +1 Query: 100 QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270 Q ++F G + ++LVR +G FGG R TMRRTVKSAPQSIWYG DRPKYLGPFSEQTP Sbjct: 7 QQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 67 SYLTGEFPGDYGWDT 81
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 116 bits (291), Expect = 1e-26 Identities = 53/62 (85%), Positives = 57/62 (91%), Gaps = 1/62 (1%) Frame = +1 Query: 133 RDDLVRSVGDF-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGW 309 +++LVR +G F GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGW Sbjct: 20 QNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGW 79 Query: 310 DT 315 DT Sbjct: 80 DT 81
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 115 bits (287), Expect = 4e-26 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 3/75 (4%) Frame = +1 Query: 100 QTTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270 Q++S G P++++LV+ VG RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TP Sbjct: 8 QSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTP 67 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 68 SYLTGEFPGDYGWDT 82
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 114 bits (286), Expect = 5e-26 Identities = 53/74 (71%), Positives = 61/74 (82%), Gaps = 2/74 (2%) Frame = +1 Query: 100 QTTSFLGTAP--RRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273 Q+++F G +RD+LVR VG GR +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPS Sbjct: 7 QSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPS 66 Query: 274 YLTGEFPGDYGWDT 315 YLTGEFPGDYGWDT Sbjct: 67 YLTGEFPGDYGWDT 80
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 111 bits (278), Expect = 4e-25 Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 3/75 (4%) Frame = +1 Query: 100 QTTSFLGTAPRR--DDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270 Q ++F G R ++ +R G+FG R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ P Sbjct: 7 QQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIP 66 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 67 SYLTGEFPGDYGWDT 81
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 110 bits (275), Expect = 9e-25 Identities = 48/50 (96%), Positives = 49/50 (98%) Frame = +1 Query: 166 GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GGR+TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDT Sbjct: 4 GGRVTMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 53
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 107 bits (268), Expect = 6e-24 Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 3/75 (4%) Frame = +1 Query: 100 QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270 Q ++F G + ++LV +G GG R++MRRTVKSAP SIWYGPDRPKYLGPFS+Q P Sbjct: 7 QQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIP 66 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 67 SYLTGEFPGDYGWDT 81
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 87.0 bits (214), Expect = 1e-17 Identities = 45/71 (63%), Positives = 50/71 (70%), Gaps = 2/71 (2%) Frame = +1 Query: 109 SFLGTAPRRDDLVRSVGDFGGRITMRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLT 282 SF G A + + GRITMR+ V KSAP S WYGPDR KYLGPFS ++PSYLT Sbjct: 12 SFAGQAVKLSPSASEISG-NGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLT 70 Query: 283 GEFPGDYGWDT 315 GEFPGDYGWDT Sbjct: 71 GEFPGDYGWDT 81
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 86.7 bits (213), Expect = 1e-17 Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 5/59 (8%) Frame = +1 Query: 154 VGDFG-GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 VG FG GRITMR+TV +A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 20 VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 84.3 bits (207), Expect = 7e-17 Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%) Frame = +1 Query: 169 GRITMRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR++MR+TVK+ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 31 GRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 80
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 84.0 bits (206), Expect = 9e-17 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 7/78 (8%) Frame = +1 Query: 103 TTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSE 261 ++SF G A P ++ R+ G++TMR+TV A S WYGPDR KYLGPFS Sbjct: 10 SSSFAGKAVNVPSSSEITRN-----GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSG 64 Query: 262 QTPSYLTGEFPGDYGWDT 315 + PSYLTGEFPGDYGWDT Sbjct: 65 EAPSYLTGEFPGDYGWDT 82
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 83.2 bits (204), Expect = 2e-16 Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 2/51 (3%) Frame = +1 Query: 169 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR++MR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 81
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 82.4 bits (202), Expect = 3e-16 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 3/63 (4%) Frame = +1 Query: 136 DDLVRSV-GDFGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYG 306 ++L R V G+ R+TMRRTV + S IWYG DRPK+LGPFS +TPSYL GEF GDYG Sbjct: 22 NELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYG 81 Query: 307 WDT 315 WDT Sbjct: 82 WDT 84
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 82.4 bits (202), Expect = 3e-16 Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G++TMR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 82.0 bits (201), Expect = 3e-16 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR+TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 81.6 bits (200), Expect = 4e-16 Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 4/75 (5%) Frame = +1 Query: 103 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 270 ++SF G A + G+ G+ TMR+TV A S WYGPDR KYLGPFS + P Sbjct: 10 SSSFAGKAVNVPSSSQITGN--GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 68 SYLTGEFPGDYGWDT 82
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 81.3 bits (199), Expect = 6e-16 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 30 GKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 81.3 bits (199), Expect = 6e-16 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 30 GKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 81.3 bits (199), Expect = 6e-16 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G++TMR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 80.9 bits (198), Expect = 8e-16 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 5/54 (9%) Frame = +1 Query: 169 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GRITMR+T P+++ WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 80.9 bits (198), Expect = 8e-16 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 3/52 (5%) Frame = +1 Query: 169 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR+TMR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 80.9 bits (198), Expect = 8e-16 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 3/52 (5%) Frame = +1 Query: 169 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR+TMR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 80.9 bits (198), Expect = 8e-16 Identities = 38/51 (74%), Positives = 42/51 (82%), Gaps = 2/51 (3%) Frame = +1 Query: 169 GRITMRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR+TMR+TVK + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 31 GRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 81
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 80.5 bits (197), Expect = 1e-15 Identities = 37/53 (69%), Positives = 40/53 (75%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G+ TMR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 31 GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 80.5 bits (197), Expect = 1e-15 Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 4/75 (5%) Frame = +1 Query: 103 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTP 270 ++SF G A + + G++TMR+TV A S WYGPDR KYLGPFS + P Sbjct: 10 SSSFAGKAVKLSSSSSEITG-NGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAP 68 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFP DYGWDT Sbjct: 69 SYLTGEFPSDYGWDT 83
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 80.5 bits (197), Expect = 1e-15 Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 2/51 (3%) Frame = +1 Query: 169 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR++MR+TV + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 29 GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 79
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 79.7 bits (195), Expect = 2e-15 Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G++TMR+T A S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDT 83
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 79.3 bits (194), Expect = 2e-15 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%) Frame = +1 Query: 169 GRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GR++MR+T S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 61
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 79.0 bits (193), Expect = 3e-15 Identities = 36/53 (67%), Positives = 39/53 (73%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G+ TMR+T A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 31 GKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 78.6 bits (192), Expect = 4e-15 Identities = 39/72 (54%), Positives = 42/72 (58%) Frame = +1 Query: 100 QTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 279 + T FLG + L V R TM +WYGPDR KYLGPFS QTPSYL Sbjct: 15 KATPFLGQTKNANPLRDVVAMGSARFTMSN-------DLWYGPDRVKYLGPFSAQTPSYL 67 Query: 280 TGEFPGDYGWDT 315 GEFPGDYGWDT Sbjct: 68 NGEFPGDYGWDT 79
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 78.2 bits (191), Expect = 5e-15 Identities = 36/53 (67%), Positives = 39/53 (73%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G+ MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 31 GKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 78.2 bits (191), Expect = 5e-15 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 4/54 (7%) Frame = +1 Query: 166 GGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 G R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 31 GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 84
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 78.2 bits (191), Expect = 5e-15 Identities = 37/61 (60%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Frame = +1 Query: 136 DDLVRSVGDFGGRITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312 ++L R VG R+ M AP SIWYG DRP YLGPFS PSYL+GEFPGDYGWD Sbjct: 21 NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80 Query: 313 T 315 T Sbjct: 81 T 81
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 77.4 bits (189), Expect = 8e-15 Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%) Frame = +1 Query: 172 RITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 R++MR+T + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 32 RVSMRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 80
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 77.0 bits (188), Expect = 1e-14 Identities = 35/49 (71%), Positives = 36/49 (73%) Frame = +1 Query: 169 GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GRITM +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDT Sbjct: 41 GRITMGN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDT 82
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 76.6 bits (187), Expect = 1e-14 Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 2/50 (4%) Frame = +1 Query: 172 RITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 + TMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 22 KFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 71
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 76.3 bits (186), Expect = 2e-14 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 6/69 (8%) Frame = +1 Query: 127 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 288 P+ + L+ G G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGE Sbjct: 26 PQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGE 85 Query: 289 FPGDYGWDT 315 FPGDYGWDT Sbjct: 86 FPGDYGWDT 94
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 75.9 bits (185), Expect = 2e-14 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 6/69 (8%) Frame = +1 Query: 127 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 288 P+ + L+ G G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGE Sbjct: 26 PQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGE 85 Query: 289 FPGDYGWDT 315 FPGDYGWDT Sbjct: 86 FPGDYGWDT 94
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 75.9 bits (185), Expect = 2e-14 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 4/52 (7%) Frame = +1 Query: 172 RITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 R TMR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 34 RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 85
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 75.5 bits (184), Expect = 3e-14 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 5/53 (9%) Frame = +1 Query: 172 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 R+TMR+ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDT Sbjct: 38 RVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 75.1 bits (183), Expect = 4e-14 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Frame = +1 Query: 103 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 270 ++SF G A + +GD R+ MR+T A Q S WYG DR YLGP S + P Sbjct: 10 SSSFAGKAVKNLPSSALIGD--ARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPP 67 Query: 271 SYLTGEFPGDYGWDT 315 SYLTGEFPGDYGWDT Sbjct: 68 SYLTGEFPGDYGWDT 82
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 73.6 bits (179), Expect = 1e-13 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 5/53 (9%) Frame = +1 Query: 172 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDT Sbjct: 29 RVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 73.6 bits (179), Expect = 1e-13 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 5/53 (9%) Frame = +1 Query: 172 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDT Sbjct: 29 RVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 72.0 bits (175), Expect = 4e-13 Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GRITMR++ +A S WYG DR YLGP S + PSYLTGEFPGDYGWDT Sbjct: 25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 71.6 bits (174), Expect = 5e-13 Identities = 36/53 (67%), Positives = 37/53 (69%), Gaps = 4/53 (7%) Frame = +1 Query: 169 GRITMRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 GRITMR+T K P S WYG DR YLGP S PSYLTGEFPGDYGWDT Sbjct: 28 GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDT 80
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 71.6 bits (174), Expect = 5e-13 Identities = 28/33 (84%), Positives = 30/33 (90%) Frame = +1 Query: 217 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 WYGPDR K+LGPFS TP+YLTGEFPGDYGWDT Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDT 71
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 69.7 bits (169), Expect = 2e-12 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 5/53 (9%) Frame = +1 Query: 172 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 RITMR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDT Sbjct: 29 RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 69.3 bits (168), Expect = 2e-12 Identities = 28/39 (71%), Positives = 33/39 (84%) Frame = +1 Query: 199 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 ++ S W+GPD KYLGPFS ++PSYLTGEFPGDYGWDT Sbjct: 6 ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDT 44
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 66.6 bits (161), Expect = 1e-11 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 3/51 (5%) Frame = +1 Query: 172 RITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDT 315 R T ++ + + P++ +YGPDR K+LGPFSE TP YLTGEFPGDYGWDT Sbjct: 16 RQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDT 66
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/43 (67%), Positives = 36/43 (83%), Gaps = 4/43 (9%) Frame = +1 Query: 199 SAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDT 315 +AP+S +YGP+R K+LGP+SE TP+YLTGEFPGDYGWDT Sbjct: 27 AAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 60.5 bits (145), Expect = 1e-09 Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 5/48 (10%) Frame = +1 Query: 169 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPG 297 GR++MR+T AP+++ WYGPDR KYLGPFS + PSYLTGEF G Sbjct: 30 GRVSMRKT---APKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG 74
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 57.8 bits (138), Expect = 7e-09 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = +1 Query: 232 RPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 R KYLGPFS + PSYLTGEFPGDYGWDT Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDT 85
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 48.5 bits (114), Expect = 4e-06 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = +1 Query: 250 PFSEQTPSYLTGEFPGDYGWDT 315 PFS + PSYLTGEFPGDYGWDT Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDT 22
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 38.9 bits (89), Expect = 0.003 Identities = 19/39 (48%), Positives = 22/39 (56%) Frame = +1 Query: 199 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315 S+ + +YGPD Q P TGEFPGDYGWDT Sbjct: 51 SSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDT 88
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 37.0 bits (84), Expect = 0.013 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = +1 Query: 217 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWD 312 WYGPDR +L + P YL GE GDYG+D Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96
>MCPH1_HUMAN (Q8NEM0) Microcephalin| Length = 835 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -3 Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51 PPK R RS+RR +PR + C ++ + VAG A E Sbjct: 366 PPKEKCKRKRSTRRSIMPR--LQLCRSEGRLQHVAGPALE 403
>GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Gluconate permease 3)| (Gnt-III system) Length = 447 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 142 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 300 LV + G G + + + + P I G PK+LG TPS+L + P D Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218
>GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Gluconate permease 3)| (Gnt-III system) Length = 447 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 142 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 300 LV + G G + + + + P I G PK+LG TPS+L + P D Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218
>MCPH1_MACFA (Q5IFK1) Microcephalin| Length = 842 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51 PPK R RS RR +PR + C ++ ++ +AG A E Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQCMAGPALE 403
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +1 Query: 256 SEQTPSYLTGEFPGDYGWD 312 S+Q+ SYL G PGD+G+D Sbjct: 59 SKQSLSYLDGRLPGDFGFD 77
>RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 235 Score = 28.5 bits (62), Expect = 4.5 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Frame = -2 Query: 309 PPVVAGEL----AGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXX 142 P + GEL A V L ERA+VLG R + G A+ G Sbjct: 71 PDLPEGELTKIRAAVVCEPSLAERARVLGIGRHMRFGRGEAVSGRDRDSTLSDAFEAVVG 130 Query: 141 VIAPRGGAEEAGRLVQRRRG 82 + GG E A R V R G Sbjct: 131 ALYLDGGLEAAQRFVLRELG 150
>MCPH1_PANTR (P61593) Microcephalin| Length = 835 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -3 Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51 PPK R RS RR +PR + C ++ + VAG A E Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGRLQHVAGPALE 403
>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p| Ib) Length = 308 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = +2 Query: 50 ARRQPQPPAKWPRRRC---TRRPASSAPPR 130 A RQP PP P RR + RP S +PPR Sbjct: 67 ASRQPWPPLPTPLRRTSSRSSRPPSPSPPR 96
>MCPH1_PONPY (P61594) Microcephalin| Length = 839 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51 PPK R RS RR +PR + C ++ ++ VAG A + Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQHVAGPALQ 403
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 28.1 bits (61), Expect = 5.8 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +1 Query: 262 QTPSYLTGEFPGDYGWD 312 Q P++LTGE+P D G+D Sbjct: 167 QPPAHLTGEYPADRGFD 183
>PIV6_ADES1 (Q8JN68) Minor capsid protein 6 precursor (Minor capsid protein VI)| [Contains: Protease cofactor] Length = 223 Score = 28.1 bits (61), Expect = 5.8 Identities = 33/98 (33%), Positives = 40/98 (40%) Frame = -2 Query: 312 VPPVVAGELAGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIA 133 VPP+V G GQ+ R +VL R V ALG ++ P A Sbjct: 149 VPPLVTGVRPGQM-------RPEVLPPDRGV--ALGPLIEEP-----------------A 182 Query: 132 PRGGAEEAGRLVQRRRGHFAGGWGCLRAQ*DQLEDGVC 19 PR A R +R+R GWG A D L DGVC Sbjct: 183 PRPIAVPGSRPRKRKR---VRGWG--SALEDMLGDGVC 215
>MCPH1_COLGU (P61590) Microcephalin| Length = 841 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -3 Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51 PPK R RS RR +PR + CS++ + +AG A E Sbjct: 365 PPKEKCKRKRSIRRSIMPR--LQLCSSEGSRQHMAGPALE 402
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +1 Query: 166 GGRITMRR--TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312 GG T +R + +A + W P G + P +L G PGDYG+D Sbjct: 36 GGAATPKRFTVLAAAAKKSWI----PAVRGGGNLVDPEWLDGSLPGDYGFD 82
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 28.1 bits (61), Expect = 5.8 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +1 Query: 268 PSYLTGEFPGDYGWDT 315 PSYL G PGD+G+D+ Sbjct: 56 PSYLDGSAPGDFGFDS 71
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 226 PDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312 PDRP + P +L G PGD+G+D Sbjct: 63 PDRPLWFP--GSTPPEWLDGSLPGDFGFD 89
>GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose transporter| member 6 (Glucose transporter type 6) (Glucose transporter type 9) Length = 507 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2 Query: 297 AGELAGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHG 178 AG L+ + LLG + ++ + AVP A G AL AHG Sbjct: 94 AGGLSAMILNDLLGRKLSIMFS--AVPSAAGYALMAGAHG 131
>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)| (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24 (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein VP22A; C-terminal peptide] Length = 605 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = -3 Query: 269 GVCSENGPRYLGRSGPYQMLWGALLTVRRMVMRPPKSPT 153 G C + GP Y SGPY V R V PP PT Sbjct: 470 GYCPQQGPCYT-HSGPYGFQPHQSYEVPRYVPHPPPPPT 507
>PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a (OsPIN3a)| Length = 618 Score = 27.7 bits (60), Expect = 7.6 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 173 RPPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAG 63 RPPK P T + A + VW S+ + +S V+G Sbjct: 301 RPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSG 337
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 226 PDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312 PDRP + P +L G PGD+G+D Sbjct: 63 PDRPLWFP--GSTPPPWLDGSLPGDFGFD 89
>YG22_YEAST (P53235) Hypothetical 71.3 kDa protein in SCM4-MUP1 intergenic| region Length = 642 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/35 (25%), Positives = 21/35 (60%) Frame = -3 Query: 179 VMRPPKSPTLRTRSSRRGAVPRKLVVWCSADAAIS 75 ++ P + PT+ T + +G P +L++W ++ I+ Sbjct: 188 LISPAEHPTICTFTPEKGGKPAQLIIWALSEGKIT 222
>AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 548 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 184 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 276 R T+K + W+ D PKYL P + PSY Sbjct: 256 RATIKDIREHEWFKQDLPKYLFP---EDPSY 283
>AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 184 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 276 R T+K + W+ D PKYL P + PSY Sbjct: 258 RATIKDIREHEWFKQDLPKYLFP---EDPSY 285
>AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic subunit alpha-1| (EC 2.7.11.1) (AMPK alpha-1 chain) Length = 550 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 184 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 276 R T+K + W+ D PKYL P + PSY Sbjct: 258 RATIKDIREHEWFKQDLPKYLFP---EDPSY 285
>ASB13_MOUSE (Q8VBX0) Ankyrin repeat and SOCS box protein 13 (ASB-13)| Length = 278 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/63 (25%), Positives = 25/63 (39%) Frame = +1 Query: 94 LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273 LH+T + DL+ + +FGG I R P + P + E+TP Sbjct: 181 LHETALHHAAKVKNVDLIEMLIEFGGNIYARDNRGKKPSDYTWSSSAPAKCFEYYEKTPL 240 Query: 274 YLT 282 L+ Sbjct: 241 SLS 243
>ASB13_HUMAN (Q8WXK3) Ankyrin repeat and SOCS box protein 13 (ASB-13)| Length = 278 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/63 (25%), Positives = 25/63 (39%) Frame = +1 Query: 94 LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273 LH+T + DL+ + +FGG I R P + P + E+TP Sbjct: 181 LHETALHHAAKVKNVDLIEMLIEFGGNIYARDNRGKKPSDYTWSSSAPAKCFEYYEKTPL 240 Query: 274 YLT 282 L+ Sbjct: 241 TLS 243
>LGRC_BREPA (Q70LM5) Linear gramicidin synthetase subunit C [Includes:| ATP-dependent valine adenylase (ValA) (Valine activase); ATP-dependent D-valine adenylase (D-ValA) (D-valine activase); Valine racemase [ATP-hydrolyzing] (EC 5.1.1.-); ATP-dependent tr Length = 7756 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -3 Query: 212 LWGALLTVRRMVMRPPKSPTL 150 +WGALL ++V+ PP P+L Sbjct: 1735 IWGALLNGAKLVLMPPDLPSL 1755 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -3 Query: 212 LWGALLTVRRMVMRPPKSPTL 150 +WGALL ++V+ PP P+L Sbjct: 670 IWGALLNGAKLVLMPPDLPSL 690
>DUT_HHV11 (P10234) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 371 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 6/72 (8%) Frame = -2 Query: 237 GTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIAPRGGAEEAGRLVQRRRGHFA----- 73 G + PD+LGR DG H +A RGG LV RR F Sbjct: 7 GAILVQPDSLGRGYDGDWH------------TAVATRGGGVVQLNLVNRRAVAFMPKVSG 54 Query: 72 -GGWGCLRAQ*D 40 GW R D Sbjct: 55 DSGWAVGRVSLD 66
>DHE4_SACBA (Q8TFF6) NADP-specific glutamate dehydrogenase 1 (EC 1.4.1.4)| (NADP-GDH 1) (NADP-dependent glutamate dehydrogenase 1) Length = 454 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 178 TMRRTVKSAPQSIWYGPDRPKYLG 249 T R T + +S+WYGP + LG Sbjct: 353 TARATASTLKESVWYGPPKAANLG 376 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,032,829 Number of Sequences: 219361 Number of extensions: 664019 Number of successful extensions: 2548 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 2476 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2539 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)