ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet03g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 155 3e-38
2CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 120 1e-27
3CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 119 2e-27
4CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 117 1e-26
5CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 116 1e-26
6CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 115 4e-26
7CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 114 5e-26
8CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 111 4e-25
9CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 110 9e-25
10CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 107 6e-24
11CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 87 1e-17
12CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 87 1e-17
13CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 84 7e-17
14CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 84 9e-17
15CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 83 2e-16
16CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 82 3e-16
17CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 82 3e-16
18CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 82 3e-16
19CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 82 4e-16
20CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 81 6e-16
21CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 81 6e-16
22CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 81 6e-16
23CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 81 8e-16
24CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 81 8e-16
25CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 81 8e-16
26CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 81 8e-16
27CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 80 1e-15
28CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 80 1e-15
29CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 80 1e-15
30CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 80 2e-15
31CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 79 2e-15
32CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 79 3e-15
33CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 79 4e-15
34CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 78 5e-15
35CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 78 5e-15
36CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 78 5e-15
37CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 77 8e-15
38CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 77 1e-14
39CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 77 1e-14
40CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 76 2e-14
41CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 76 2e-14
42CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 76 2e-14
43CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 75 3e-14
44CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 75 4e-14
45CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 74 1e-13
46CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 74 1e-13
47CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 72 4e-13
48CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 72 5e-13
49CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 72 5e-13
50CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 70 2e-12
51CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 69 2e-12
52CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 67 1e-11
53CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 63 2e-10
54CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 60 1e-09
55CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 58 7e-09
56CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 49 4e-06
57CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 39 0.003
58CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 37 0.013
59MCPH1_HUMAN (Q8NEM0) Microcephalin 30 2.0
60GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Glucona... 29 2.6
61GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Glucona... 29 2.6
62MCPH1_MACFA (Q5IFK1) Microcephalin 29 3.4
63CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 29 3.4
64RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III) 28 4.5
65MCPH1_PANTR (P61593) Microcephalin 28 4.5
66MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (L... 28 4.5
67MCPH1_PONPY (P61594) Microcephalin 28 5.8
68LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 28 5.8
69PIV6_ADES1 (Q8JN68) Minor capsid protein 6 precursor (Minor caps... 28 5.8
70MCPH1_COLGU (P61590) Microcephalin 28 5.8
71CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 28 5.8
72CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 28 5.8
73CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 28 5.8
74GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose... 28 5.8
75VP40_EBV (P03234) Capsid protein P40 (Virion structural protein ... 28 7.6
76PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a ... 28 7.6
77CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 28 7.6
78YG22_YEAST (P53235) Hypothetical 71.3 kDa protein in SCM4-MUP1 i... 27 9.9
79AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic sub... 27 9.9
80AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic s... 27 9.9
81AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic s... 27 9.9
82ASB13_MOUSE (Q8VBX0) Ankyrin repeat and SOCS box protein 13 (ASB... 27 9.9
83ASB13_HUMAN (Q8WXK3) Ankyrin repeat and SOCS box protein 13 (ASB... 27 9.9
84LGRC_BREPA (Q70LM5) Linear gramicidin synthetase subunit C [Incl... 27 9.9
85DUT_HHV11 (P10234) Deoxyuridine 5'-triphosphate nucleotidohydrol... 27 9.9
86DHE4_SACBA (Q8TFF6) NADP-specific glutamate dehydrogenase 1 (EC ... 27 9.9

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  155 bits (391), Expect = 3e-38
 Identities = 71/74 (95%), Positives = 72/74 (97%)
 Frame = +1

Query: 94  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273
           LHQTTSFLGTAPRRD+LVR VGD GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS
Sbjct: 6   LHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 65

Query: 274 YLTGEFPGDYGWDT 315
           YLTGEFPGDYGWDT
Sbjct: 66  YLTGEFPGDYGWDT 79



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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  120 bits (300), Expect = 1e-27
 Identities = 57/75 (76%), Positives = 65/75 (86%), Gaps = 3/75 (4%)
 Frame = +1

Query: 100 QTTSFLGTA--PRRDDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270
           Q ++F+G A    +++ +R VG+FG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7   QQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 67  SYLTGEFPGDYGWDT 81



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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  119 bits (298), Expect = 2e-27
 Identities = 51/61 (83%), Positives = 58/61 (95%)
 Frame = +1

Query: 133 RDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312
           +++LVR VG  GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 313 T 315
           T
Sbjct: 80  T 80



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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  117 bits (292), Expect = 1e-26
 Identities = 56/75 (74%), Positives = 62/75 (82%), Gaps = 3/75 (4%)
 Frame = +1

Query: 100 QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270
           Q ++F G    +  ++LVR +G FGG R TMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7   QQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 67  SYLTGEFPGDYGWDT 81



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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  116 bits (291), Expect = 1e-26
 Identities = 53/62 (85%), Positives = 57/62 (91%), Gaps = 1/62 (1%)
 Frame = +1

Query: 133 RDDLVRSVGDF-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGW 309
           +++LVR +G F GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGW
Sbjct: 20  QNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGW 79

Query: 310 DT 315
           DT
Sbjct: 80  DT 81



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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  115 bits (287), Expect = 4e-26
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 3/75 (4%)
 Frame = +1

Query: 100 QTTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270
           Q++S  G     P++++LV+ VG    RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TP
Sbjct: 8   QSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTP 67

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 68  SYLTGEFPGDYGWDT 82



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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  114 bits (286), Expect = 5e-26
 Identities = 53/74 (71%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
 Frame = +1

Query: 100 QTTSFLGTAP--RRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273
           Q+++F G     +RD+LVR VG   GR +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPS
Sbjct: 7   QSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPS 66

Query: 274 YLTGEFPGDYGWDT 315
           YLTGEFPGDYGWDT
Sbjct: 67  YLTGEFPGDYGWDT 80



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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  111 bits (278), Expect = 4e-25
 Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 3/75 (4%)
 Frame = +1

Query: 100 QTTSFLGTAPRR--DDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270
           Q ++F G    R  ++ +R  G+FG  R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ P
Sbjct: 7   QQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIP 66

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 67  SYLTGEFPGDYGWDT 81



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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  110 bits (275), Expect = 9e-25
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = +1

Query: 166 GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GGR+TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDT
Sbjct: 4   GGRVTMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 53



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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  107 bits (268), Expect = 6e-24
 Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 3/75 (4%)
 Frame = +1

Query: 100 QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 270
           Q ++F G    +  ++LV  +G  GG R++MRRTVKSAP SIWYGPDRPKYLGPFS+Q P
Sbjct: 7   QQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIP 66

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 67  SYLTGEFPGDYGWDT 81



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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 45/71 (63%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
 Frame = +1

Query: 109 SFLGTAPRRDDLVRSVGDFGGRITMRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLT 282
           SF G A +       +    GRITMR+ V KSAP S  WYGPDR KYLGPFS ++PSYLT
Sbjct: 12  SFAGQAVKLSPSASEISG-NGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 283 GEFPGDYGWDT 315
           GEFPGDYGWDT
Sbjct: 71  GEFPGDYGWDT 81



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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 43/59 (72%), Positives = 46/59 (77%), Gaps = 5/59 (8%)
 Frame = +1

Query: 154 VGDFG-GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           VG FG GRITMR+TV     +A  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 20  VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78



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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 84.3 bits (207), Expect = 7e-17
 Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
 Frame = +1

Query: 169 GRITMRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR++MR+TVK+    S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 31  GRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 80



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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 84.0 bits (206), Expect = 9e-17
 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 7/78 (8%)
 Frame = +1

Query: 103 TTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSE 261
           ++SF G A   P   ++ R+     G++TMR+TV  A      S WYGPDR KYLGPFS 
Sbjct: 10  SSSFAGKAVNVPSSSEITRN-----GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSG 64

Query: 262 QTPSYLTGEFPGDYGWDT 315
           + PSYLTGEFPGDYGWDT
Sbjct: 65  EAPSYLTGEFPGDYGWDT 82



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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +1

Query: 169 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR++MR+TV    A  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 81



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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
 Frame = +1

Query: 136 DDLVRSV-GDFGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYG 306
           ++L R V G+   R+TMRRTV  +  S  IWYG DRPK+LGPFS +TPSYL GEF GDYG
Sbjct: 22  NELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYG 81

Query: 307 WDT 315
           WDT
Sbjct: 82  WDT 84



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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G++TMR+TV  A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83



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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR+TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83



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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
 Frame = +1

Query: 103 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 270
           ++SF G A       +  G+  G+ TMR+TV  A      S WYGPDR KYLGPFS + P
Sbjct: 10  SSSFAGKAVNVPSSSQITGN--GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 68  SYLTGEFPGDYGWDT 82



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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 30  GKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82



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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 30  GKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82



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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83



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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 5/54 (9%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GRITMR+T    P+++     WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 83



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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 3/52 (5%)
 Frame = +1

Query: 169 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR+TMR+TV   K    S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82



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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 37/52 (71%), Positives = 41/52 (78%), Gaps = 3/52 (5%)
 Frame = +1

Query: 169 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR+TMR+TV   K    S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82



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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 38/51 (74%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +1

Query: 169 GRITMRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR+TMR+TVK + P  S WYG DR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 31  GRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 81



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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 37/53 (69%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G+ TMR+TV  A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 31  GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83



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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
 Frame = +1

Query: 103 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTP 270
           ++SF G A +       +    G++TMR+TV  A      S WYGPDR KYLGPFS + P
Sbjct: 10  SSSFAGKAVKLSSSSSEITG-NGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAP 68

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFP DYGWDT
Sbjct: 69  SYLTGEFPSDYGWDT 83



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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
 Frame = +1

Query: 169 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR++MR+TV    +  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 29  GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 79



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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G++TMR+T   A      S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDT 83



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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GR++MR+T      S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 11  GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 61



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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 36/53 (67%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G+ TMR+T   A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 31  GKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83



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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 39/72 (54%), Positives = 42/72 (58%)
 Frame = +1

Query: 100 QTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 279
           + T FLG     + L   V     R TM          +WYGPDR KYLGPFS QTPSYL
Sbjct: 15  KATPFLGQTKNANPLRDVVAMGSARFTMSN-------DLWYGPDRVKYLGPFSAQTPSYL 67

Query: 280 TGEFPGDYGWDT 315
            GEFPGDYGWDT
Sbjct: 68  NGEFPGDYGWDT 79



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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 36/53 (67%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G+  MR+TV  A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 31  GKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 83



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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 4/54 (7%)
 Frame = +1

Query: 166 GGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           G R TMR++  +    +  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 31  GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 84



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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 37/61 (60%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = +1

Query: 136 DDLVRSVGDFGGRITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312
           ++L R VG    R+ M      AP  SIWYG DRP YLGPFS   PSYL+GEFPGDYGWD
Sbjct: 21  NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80

Query: 313 T 315
           T
Sbjct: 81  T 81



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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = +1

Query: 172 RITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           R++MR+T  +    S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 32  RVSMRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 80



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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 35/49 (71%), Positives = 36/49 (73%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GRITM          +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDT
Sbjct: 41  GRITMGN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDT 82



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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
 Frame = +1

Query: 172 RITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           + TMR+T   +  S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 22  KFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 71



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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
 Frame = +1

Query: 127 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 288
           P+ + L+   G  G  R+TMR+    KS   SI   WYGPDR  YLGPFS + PSYLTGE
Sbjct: 26  PQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGE 85

Query: 289 FPGDYGWDT 315
           FPGDYGWDT
Sbjct: 86  FPGDYGWDT 94



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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 6/69 (8%)
 Frame = +1

Query: 127 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 288
           P+ + L+   G  G  R+TMR+    KS   SI   WYGPDR  YLGPFS + PSYLTGE
Sbjct: 26  PQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGE 85

Query: 289 FPGDYGWDT 315
           FPGDYGWDT
Sbjct: 86  FPGDYGWDT 94



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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
 Frame = +1

Query: 172 RITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           R TMR++  +    +  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 34  RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDT 85



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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
 Frame = +1

Query: 172 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           R+TMR+        SA  S WYGPDR  YLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 38  RVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90



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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
 Frame = +1

Query: 103 TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 270
           ++SF G A +       +GD   R+ MR+T   A Q    S WYG DR  YLGP S + P
Sbjct: 10  SSSFAGKAVKNLPSSALIGD--ARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPP 67

Query: 271 SYLTGEFPGDYGWDT 315
           SYLTGEFPGDYGWDT
Sbjct: 68  SYLTGEFPGDYGWDT 82



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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
 Frame = +1

Query: 172 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           R+TMR+T   A       S WYGPDR  YLGP S + PSYLTGEFPGDYGWDT
Sbjct: 29  RVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81



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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
 Frame = +1

Query: 172 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           R+TMR+T   A       S WYGPDR  YLGP S + PSYLTGEFPGDYGWDT
Sbjct: 29  RVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81



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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GRITMR++      +A  S WYG DR  YLGP S + PSYLTGEFPGDYGWDT
Sbjct: 25  GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77



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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 36/53 (67%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +1

Query: 169 GRITMRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           GRITMR+T  K  P    S WYG DR  YLGP S   PSYLTGEFPGDYGWDT
Sbjct: 28  GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDT 80



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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 217 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           WYGPDR K+LGPFS  TP+YLTGEFPGDYGWDT
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDT 71



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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
 Frame = +1

Query: 172 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           RITMR+T       ++  S WYG DR  YLGP S + PSYLTGEFPGDYGWDT
Sbjct: 29  RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81



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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = +1

Query: 199 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           ++  S W+GPD  KYLGPFS ++PSYLTGEFPGDYGWDT
Sbjct: 6   ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDT 44



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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 3/51 (5%)
 Frame = +1

Query: 172 RITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDT 315
           R T ++ + + P++   +YGPDR K+LGPFSE  TP YLTGEFPGDYGWDT
Sbjct: 16  RQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDT 66



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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 29/43 (67%), Positives = 36/43 (83%), Gaps = 4/43 (9%)
 Frame = +1

Query: 199 SAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDT 315
           +AP+S    +YGP+R K+LGP+SE  TP+YLTGEFPGDYGWDT
Sbjct: 27  AAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69



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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 5/48 (10%)
 Frame = +1

Query: 169 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPG 297
           GR++MR+T   AP+++     WYGPDR KYLGPFS + PSYLTGEF G
Sbjct: 30  GRVSMRKT---APKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG 74



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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = +1

Query: 232 RPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           R KYLGPFS + PSYLTGEFPGDYGWDT
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDT 85



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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +1

Query: 250 PFSEQTPSYLTGEFPGDYGWDT 315
           PFS + PSYLTGEFPGDYGWDT
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDT 22



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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +1

Query: 199 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDT 315
           S+  + +YGPD          Q P   TGEFPGDYGWDT
Sbjct: 51  SSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDT 88



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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +1

Query: 217 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWD 312
           WYGPDR  +L        + P YL GE  GDYG+D
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96



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>MCPH1_HUMAN (Q8NEM0) Microcephalin|
          Length = 835

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51
           PPK    R RS+RR  +PR  +  C ++  +  VAG A E
Sbjct: 366 PPKEKCKRKRSTRRSIMPR--LQLCRSEGRLQHVAGPALE 403



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>GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 142 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 300
           LV + G   G + +   + + P  I  G   PK+LG     TPS+L  + P D
Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218



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>GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 142 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 300
           LV + G   G + +   + + P  I  G   PK+LG     TPS+L  + P D
Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218



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>MCPH1_MACFA (Q5IFK1) Microcephalin|
          Length = 842

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51
           PPK    R RS RR  +PR  +  C ++ ++  +AG A E
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQCMAGPALE 403



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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +1

Query: 256 SEQTPSYLTGEFPGDYGWD 312
           S+Q+ SYL G  PGD+G+D
Sbjct: 59  SKQSLSYLDGRLPGDFGFD 77



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>RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 235

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
 Frame = -2

Query: 309 PPVVAGEL----AGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXX 142
           P +  GEL    A  V    L ERA+VLG  R +    G A+ G                
Sbjct: 71  PDLPEGELTKIRAAVVCEPSLAERARVLGIGRHMRFGRGEAVSGRDRDSTLSDAFEAVVG 130

Query: 141 VIAPRGGAEEAGRLVQRRRG 82
            +   GG E A R V R  G
Sbjct: 131 ALYLDGGLEAAQRFVLRELG 150



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>MCPH1_PANTR (P61593) Microcephalin|
          Length = 835

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51
           PPK    R RS RR  +PR  +  C ++  +  VAG A E
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGRLQHVAGPALE 403



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>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 50  ARRQPQPPAKWPRRRC---TRRPASSAPPR 130
           A RQP PP   P RR    + RP S +PPR
Sbjct: 67  ASRQPWPPLPTPLRRTSSRSSRPPSPSPPR 96



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>MCPH1_PONPY (P61594) Microcephalin|
          Length = 839

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51
           PPK    R RS RR  +PR  +  C ++ ++  VAG A +
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQHVAGPALQ 403



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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 262 QTPSYLTGEFPGDYGWD 312
           Q P++LTGE+P D G+D
Sbjct: 167 QPPAHLTGEYPADRGFD 183



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>PIV6_ADES1 (Q8JN68) Minor capsid protein 6 precursor (Minor capsid protein VI)|
           [Contains: Protease cofactor]
          Length = 223

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 33/98 (33%), Positives = 40/98 (40%)
 Frame = -2

Query: 312 VPPVVAGELAGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIA 133
           VPP+V G   GQ+       R +VL   R V  ALG  ++ P                 A
Sbjct: 149 VPPLVTGVRPGQM-------RPEVLPPDRGV--ALGPLIEEP-----------------A 182

Query: 132 PRGGAEEAGRLVQRRRGHFAGGWGCLRAQ*DQLEDGVC 19
           PR  A    R  +R+R     GWG   A  D L DGVC
Sbjct: 183 PRPIAVPGSRPRKRKR---VRGWG--SALEDMLGDGVC 215



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>MCPH1_COLGU (P61590) Microcephalin|
          Length = 841

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 170 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 51
           PPK    R RS RR  +PR  +  CS++ +   +AG A E
Sbjct: 365 PPKEKCKRKRSIRRSIMPR--LQLCSSEGSRQHMAGPALE 402



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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 166 GGRITMRR--TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312
           GG  T +R   + +A +  W     P   G  +   P +L G  PGDYG+D
Sbjct: 36  GGAATPKRFTVLAAAAKKSWI----PAVRGGGNLVDPEWLDGSLPGDYGFD 82



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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 268 PSYLTGEFPGDYGWDT 315
           PSYL G  PGD+G+D+
Sbjct: 56  PSYLDGSAPGDFGFDS 71



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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 226 PDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312
           PDRP +        P +L G  PGD+G+D
Sbjct: 63  PDRPLWFP--GSTPPEWLDGSLPGDFGFD 89



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>GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose transporter|
           member 6 (Glucose transporter type 6) (Glucose
           transporter type 9)
          Length = 507

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 297 AGELAGQVRRGLLGERAQVLGTVRAVPDALGRALDGPAHG 178
           AG L+  +   LLG +  ++ +  AVP A G AL   AHG
Sbjct: 94  AGGLSAMILNDLLGRKLSIMFS--AVPSAAGYALMAGAHG 131



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>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)|
           (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24
           (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein
           VP22A; C-terminal peptide]
          Length = 605

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -3

Query: 269 GVCSENGPRYLGRSGPYQMLWGALLTVRRMVMRPPKSPT 153
           G C + GP Y   SGPY         V R V  PP  PT
Sbjct: 470 GYCPQQGPCYT-HSGPYGFQPHQSYEVPRYVPHPPPPPT 507



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>PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a (OsPIN3a)|
          Length = 618

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 173 RPPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAG 63
           RPPK P   T +    A    + VW S+ + +S V+G
Sbjct: 301 RPPKPPATTTGALNHDAKELHMFVWSSSASPVSEVSG 337



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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 226 PDRPKYLGPFSEQTPSYLTGEFPGDYGWD 312
           PDRP +        P +L G  PGD+G+D
Sbjct: 63  PDRPLWFP--GSTPPPWLDGSLPGDFGFD 89



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>YG22_YEAST (P53235) Hypothetical 71.3 kDa protein in SCM4-MUP1 intergenic|
           region
          Length = 642

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = -3

Query: 179 VMRPPKSPTLRTRSSRRGAVPRKLVVWCSADAAIS 75
           ++ P + PT+ T +  +G  P +L++W  ++  I+
Sbjct: 188 LISPAEHPTICTFTPEKGGKPAQLIIWALSEGKIT 222



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>AAPK1_RAT (P54645) 5'-AMP-activated protein kinase catalytic subunit alpha-1|
           (EC 2.7.11.1) (AMPK alpha-1 chain)
          Length = 548

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 184 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 276
           R T+K   +  W+  D PKYL P   + PSY
Sbjct: 256 RATIKDIREHEWFKQDLPKYLFP---EDPSY 283



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>AAPK1_PONPY (Q5RDH5) 5'-AMP-activated protein kinase catalytic subunit alpha-1|
           (EC 2.7.11.1) (AMPK alpha-1 chain)
          Length = 550

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 184 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 276
           R T+K   +  W+  D PKYL P   + PSY
Sbjct: 258 RATIKDIREHEWFKQDLPKYLFP---EDPSY 285



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>AAPK1_HUMAN (Q13131) 5'-AMP-activated protein kinase catalytic subunit alpha-1|
           (EC 2.7.11.1) (AMPK alpha-1 chain)
          Length = 550

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 184 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY 276
           R T+K   +  W+  D PKYL P   + PSY
Sbjct: 258 RATIKDIREHEWFKQDLPKYLFP---EDPSY 285



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>ASB13_MOUSE (Q8VBX0) Ankyrin repeat and SOCS box protein 13 (ASB-13)|
          Length = 278

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +1

Query: 94  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273
           LH+T        +  DL+  + +FGG I  R      P    +    P     + E+TP 
Sbjct: 181 LHETALHHAAKVKNVDLIEMLIEFGGNIYARDNRGKKPSDYTWSSSAPAKCFEYYEKTPL 240

Query: 274 YLT 282
            L+
Sbjct: 241 SLS 243



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>ASB13_HUMAN (Q8WXK3) Ankyrin repeat and SOCS box protein 13 (ASB-13)|
          Length = 278

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/63 (25%), Positives = 25/63 (39%)
 Frame = +1

Query: 94  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 273
           LH+T        +  DL+  + +FGG I  R      P    +    P     + E+TP 
Sbjct: 181 LHETALHHAAKVKNVDLIEMLIEFGGNIYARDNRGKKPSDYTWSSSAPAKCFEYYEKTPL 240

Query: 274 YLT 282
            L+
Sbjct: 241 TLS 243



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>LGRC_BREPA (Q70LM5) Linear gramicidin synthetase subunit C [Includes:|
            ATP-dependent valine adenylase (ValA) (Valine activase);
            ATP-dependent D-valine adenylase (D-ValA) (D-valine
            activase); Valine racemase [ATP-hydrolyzing] (EC
            5.1.1.-); ATP-dependent tr
          Length = 7756

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 212  LWGALLTVRRMVMRPPKSPTL 150
            +WGALL   ++V+ PP  P+L
Sbjct: 1735 IWGALLNGAKLVLMPPDLPSL 1755



 Score = 27.3 bits (59), Expect = 9.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 212 LWGALLTVRRMVMRPPKSPTL 150
           +WGALL   ++V+ PP  P+L
Sbjct: 670 IWGALLNGAKLVLMPPDLPSL 690



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>DUT_HHV11 (P10234) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC|
           3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 371

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
 Frame = -2

Query: 237 GTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIAPRGGAEEAGRLVQRRRGHFA----- 73
           G +   PD+LGR  DG  H              +A RGG      LV RR   F      
Sbjct: 7   GAILVQPDSLGRGYDGDWH------------TAVATRGGGVVQLNLVNRRAVAFMPKVSG 54

Query: 72  -GGWGCLRAQ*D 40
             GW   R   D
Sbjct: 55  DSGWAVGRVSLD 66



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>DHE4_SACBA (Q8TFF6) NADP-specific glutamate dehydrogenase 1 (EC 1.4.1.4)|
           (NADP-GDH 1) (NADP-dependent glutamate dehydrogenase 1)
          Length = 454

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 178 TMRRTVKSAPQSIWYGPDRPKYLG 249
           T R T  +  +S+WYGP +   LG
Sbjct: 353 TARATASTLKESVWYGPPKAANLG 376


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,032,829
Number of Sequences: 219361
Number of extensions: 664019
Number of successful extensions: 2548
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 2476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2539
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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