Clone Information

BLAST Search Result

Clone Name	baet03f12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme...	74	9e-14
2	DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme...	68	6e-12
3	DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme...	63	2e-10
4	DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme...	62	3e-10
5	DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme...	62	4e-10
6	DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme...	60	1e-09
7	DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme...	58	5e-09
8	DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme...	56	2e-08
9	DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme...	56	2e-08
10	DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme...	55	3e-08
11	DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme...	55	5e-08
12	DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme...	55	5e-08
13	DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzym...	54	7e-08
14	DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzym...	52	3e-07
15	DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme...	52	3e-07
16	DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (...	52	3e-07
17	DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzym...	52	3e-07
18	DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzym...	51	6e-07
19	DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzym...	51	8e-07
20	DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzym...	48	5e-06
21	DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzym...	47	9e-06
22	DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme...	43	2e-04
23	NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA p...	32	0.50
24	PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific pl...	32	0.50
25	ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase...	30	1.4
26	MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	30	1.4
27	RS10_CHLPN (Q9Z803) 30S ribosomal protein S10	30	1.4
28	FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein	29	2.5
29	REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonse...	29	2.5
30	KHSE_ZYMMO (O69015) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)	29	3.2
31	RS10_CHLTR (P0A4A1) 30S ribosomal protein S10	29	3.2
32	RS10_CHLMU (P0A4A2) 30S ribosomal protein S10	29	3.2
33	SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2	29	3.2
34	K0853_HUMAN (Q5T200) Protein KIAA0853	28	4.2
35	T2_MOUSE (Q06666) Octapeptide-repeat protein T2	28	4.2
36	RS10_CHLCV (Q824F9) 30S ribosomal protein S10	28	4.2
37	YJIA_BACSU (O34679) Hypothetical protein yjiA precursor	28	5.5
38	LEU2_PSEU2 (Q4ZUZ6) 3-isopropylmalate dehydratase large subunit ...	28	7.2
39	LEU2_PSE14 (Q48K99) 3-isopropylmalate dehydratase large subunit ...	28	7.2
40	SEN2_RAT (Q5M954) tRNA-splicing endonuclease subunit Sen2 (EC 3....	28	7.2
41	LEU2_PSESM (Q884C2) 3-isopropylmalate dehydratase large subunit ...	28	7.2
42	AAT3_ARATH (P46644) Aspartate aminotransferase, chloroplast prec...	28	7.2
43	MLO11_ARATH (Q9FI00) MLO-like protein 11 (AtMlo11)	27	9.3
44	K1543_HUMAN (Q9P1Y5) Protein KIAA1543	27	9.3
45	PLSL_MOUSE (Q61233) Plastin-2 (L-plastin) (Lymphocyte cytosolic ...	27	9.3
46	PRGR_CHICK (P07812) Progesterone receptor (PR)	27	9.3
47	SNUT2_MOUSE (Q3TIX9) U4/U6.U5 tri-snRNP-associated protein 2 (In...	27	9.3
48	MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosi...	27	9.3
49	TDRD4_HUMAN (Q9NUY9) Tudor domain-containing protein 4	27	9.3

>DCAM_HORCH (Q42829) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 393

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           MAAP SAIGFEGYEKRLEITF+EASIFADPHGRGLRA
Sbjct: 1   MAAPVSAIGFEGYEKRLEITFSEASIFADPHGRGLRA 37

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>DCAM_MAIZE (O24575) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 400

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 247 TATMAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           +A  A+P SAIGFEGYEKRLEITF+EA +F DPHGRGLRA
Sbjct: 5   SAADASPVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRA 44

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>DCAM_ORYSA (O24215) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 398

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 265 PTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           P SAIGFEGYEKRLEITF+EA +FADP GRGLRA
Sbjct: 11  PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRA 44

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>DCAM_IPONI (Q96471) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           MA  TSAIGFEGYEKRLEI+F EA IF+DP GRGLRA
Sbjct: 1   MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRA 37

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>DCAM_CATRO (Q42679) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 357

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           MA P SAIGFEGYEKRLEI+F E+S FADP G+GLRA
Sbjct: 1   MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRA 37

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>DCAM_IPOBA (Q9M6K1) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           MA  TSAIGFEGYE RLEI+F EA IF+DP GRGLRA
Sbjct: 1   MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRA 37

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>DCAM_NICSY (O80402) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           MA P SAIGFEG+EKRLEI+F E  +FADP+G+GLR+
Sbjct: 3   MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRS 39

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>DCAM_TOBAC (O04009) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +1

Query: 259 AAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           A P SAIGFEG+EKRLEI+F E  +FADP+G+GLR+
Sbjct: 4   ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRS 39

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>DCAM_SOLTU (Q04694) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) (Induced stolen tip protein TUB13)
           [Contains: S-adenosylmethionine decarboxylase alpha
           chain; S-adenosylmethionine decarboxylase beta chain]
          Length = 360

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           M  P SAIGFEG+EKRLEI+F E  +FADP+G+GLR+
Sbjct: 3   MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRS 39

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>DCAM_SPIOL (P46255) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 363

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEG+EKRLEITF E SIF DP G+GLRA
Sbjct: 4   SAIGFEGFEKRLEITFFEPSIFVDPEGKGLRA 35

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>DCAM_DAUCA (Q9AXE3) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLR 363
           M++  SAIGFEG+EKRLEI+F E S FADP G+GLR
Sbjct: 1   MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLR 36

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>DCAM_DATST (Q96555) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 362

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = +1

Query: 256 MAAPTSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           M  P SAIGFEG+EKRLEI+F E  +F+DP+G+GLR+
Sbjct: 3   MDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRS 39

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>DCAM2_BRAJU (O49972) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 369

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEGYEKRLE++F E S+F D HG+GLRA
Sbjct: 4   SAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRA 35

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>DCAM2_DIACA (Q39677) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 377

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEG+EKRLEI+F E  IF DP G+GLRA
Sbjct: 19  SAIGFEGFEKRLEISFFEPGIFVDPEGKGLRA 50

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>DCAM_VICFA (Q9M4D8) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 353

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 22/32 (68%), Positives = 29/32 (90%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEG+EKRLEI+F++  +F+DP GRGLR+
Sbjct: 4   SAIGFEGFEKRLEISFSDPGLFSDPQGRGLRS 35

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>DCAM_PEA (Q43820) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 353

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 22/32 (68%), Positives = 29/32 (90%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEG+EKRLEI+F++  +F+DP GRGLR+
Sbjct: 4   SAIGFEGFEKRLEISFSDPGLFSDPQGRGLRS 35

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>DCAM1_DIACA (Q39676) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 381

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEG+EKRLEI+F E  IF DP G+GLRA
Sbjct: 28  SAIGFEGFEKRLEISFFEPGIFVDPEGKGLRA 59

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>DCAM1_ARATH (Q96286) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 366

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 25/32 (78%), Positives = 26/32 (81%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEGYEKRLE+TF E SIF D  G GLRA
Sbjct: 4   SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRA 35

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>DCAM2_ARATH (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC|
           4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains:
           S-adenosylmethionine decarboxylase 2 alpha chain;
           S-adenosylmethionine decarboxylase 2 beta chain]
          Length = 362

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEGYEKRLE+TF E  +F D  G+GLRA
Sbjct: 4   SAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRA 35

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>DCAM3_BRAJU (Q9SDM8) S-adenosylmethionine decarboxylase proenzyme 3 (EC|
           4.1.1.50) (AdoMetDC 3) (SamDC 3) [Contains:
           S-adenosylmethionine decarboxylase 3 alpha chain;
           S-adenosylmethionine decarboxylase 3 beta chain]
          Length = 367

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEGYEKRLE++F E S F D  G GLRA
Sbjct: 4   SAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRA 35

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>DCAM1_BRAJU (Q42613) S-adenosylmethionine decarboxylase proenzyme 1 (EC|
           4.1.1.50) (AdoMetDC 1) (SamDC 1) [Contains:
           S-adenosylmethionine decarboxylase 1 alpha chain;
           S-adenosylmethionine decarboxylase 1 beta chain]
          Length = 368

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = +1

Query: 271 SAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           SAIGFEG  +RLE++F E S+F D HG+GLRA
Sbjct: 4   SAIGFEGLRERLEVSFFEPSLFLDTHGKGLRA 35

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>DCAM_HELAN (O65354) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50)|
           (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine
           decarboxylase alpha chain; S-adenosylmethionine
           decarboxylase beta chain]
          Length = 361

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +1

Query: 268 TSAIGFEGYEKRLEITFNEASIFADPHGRGLRA 366
           TSAIGFEG+EKRLEI+F       DP  RGLR+
Sbjct: 2   TSAIGFEGFEKRLEISFFNPGPSVDPVARGLRS 34

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>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -2

Query: 249  SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRM--A 76
            ++ ++AEQ G E ERL    +  + Q +E  G++E E   +  L   +G+A+ D+ +  A
Sbjct: 969  AMEREAEQMGNELERLRAALMESQGQQQEERGQQERE---VARLTQERGRAQADLALEKA 1025

Query: 75   SSRSLNMQQKTSLRLQLVE 19
            +   L M+ + +L  Q VE
Sbjct: 1026 ARAELEMRLQNALNEQRVE 1044

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>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)|
          Length = 629

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 198 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 19
           NWS + K     +GG  +   NC   +  GK KAK  +   + + LN ++ ++L L LV 
Sbjct: 439 NWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGIAGQDLN-ERNSTLTLALVW 497

Query: 18  RL 13
           +L
Sbjct: 498 QL 499

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>ARGC2_DEIRA (Q9RY72) N-acetyl-gamma-glutamyl-phosphate reductase 2 (EC|
           1.2.1.38) (AGPR 2) (N-acetyl-glutamate semialdehyde
           dehydrogenase 2) (NAGSA dehydrogenase 2)
          Length = 306

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +1

Query: 43  SFLLHIQTARRSHPDIVFGFP 105
           S LL   TA R HPD VFGFP
Sbjct: 76  SRLLDASTAHRIHPDWVFGFP 96

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>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
 Frame = -2

Query: 363  AQATTMRVSKD*CLVEGDLEALLVALKPDRRGRGGHCCSLSQKAEQRGTEGERLENWS-- 190
            + + +++++KD   +E  L+     L+ + R +      L Q  +++    E+LE     
Sbjct: 1292 SDSKSIKLAKDFSALESQLQDTQELLQEETRLKLSFSTKLKQTEDEKNALKEQLEEEEEA 1351

Query: 189  --------IIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSR------SLNMQ 52
                     +++QQA E   + +    C++I    K K + D+   + R      + +  
Sbjct: 1352 KRNLEKQISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQKDLESLTQRYEEKIAAYDKL 1411

Query: 51   QKTSLRLQ 28
            +KT  RLQ
Sbjct: 1412 EKTKTRLQ 1419

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>RS10_CHLPN (Q9Z803) 30S ribosomal protein S10|
          Length = 105

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 10  LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 138
           LK FDQ +  RS    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDRSTADIVETAKRTGARVVGPIPLPTKREVYTVL 54

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>FETP_PSEPK (Q88R49) Probable Fe(2+) trafficking protein|
          Length = 90

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = -1

Query: 190 DYREAASQRDW--WEKRVRIKLH-KNPKLREGESQKRYQ---DGFFAQFEYAAENFFAPP 29
           D  E  SQ+ W  W+K   + ++ K   +   E +K  Q   D FFA  EYA    + PP
Sbjct: 29  DIFEHISQKAWADWQKHQTMLINEKRLNMMNAEDRKFLQAEMDKFFAGEEYAQAEGYVPP 88

Query: 28  A 26
           A
Sbjct: 89  A 89

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>REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonsense mRNA|
           reducing factor 3A) (Up-frameshift suppressor 3 homolog
           A) (hUpf3)
          Length = 476

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = -1

Query: 286 QTRSQRSGRPLLQFESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLRE 107
           + R +R  R L +     R E  R R   E    +E   Q+   EK VRIKL K P+  E
Sbjct: 234 EKREERRRRELEK--KRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLLKKPEKGE 291

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>KHSE_ZYMMO (O69015) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 320

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -1

Query: 247 FESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLREGESQKRYQDGFFA 68
           FE+ ++ E + G E ++ +DY +    +D     +   L  +  L EG+S K   D +FA
Sbjct: 158 FEAMNQIEAHMGDEVKKELDYLDKFWPKDLPRSVIHADLFPDNVLFEGDSLKGVIDFYFA 217

Query: 67  QFEYAA 50
             E  A
Sbjct: 218 CTEVRA 223

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>RS10_CHLTR (P0A4A1) 30S ribosomal protein S10|
          Length = 105

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 10  LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 138
           LK FDQ +  +S    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDQSTANIVETAKRTGARVVGPIPLPTKREVYTVL 54

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>RS10_CHLMU (P0A4A2) 30S ribosomal protein S10|
          Length = 105

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 10  LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 138
           LK FDQ +  +S    ++TA+R+   +V   PLP   + Y +L
Sbjct: 12  LKGFDQGQLDQSTANIVETAKRTGARVVGPIPLPTKREVYTVL 54

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>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -1

Query: 241 SESRAERNRGRETRELVDYREAASQRDWWEKRVRIK-LHKNPKLREGESQKRYQ 83
           S+S+  ++ GRE R+++ + +   QR+   +R R + + +  + RE E ++R Q
Sbjct: 638 SKSQDRKSEGREKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQ 691

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
 Frame = -1

Query: 244 ESESRAERNRGRETRELVDY-REAASQRDW----------WEKRVRIKLHKNPK--LREG 104
           E E   ER R RE     +  +E   QRDW           EKR  I+  +NP+    E 
Sbjct: 761 ERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDER 820

Query: 103 ESQKRYQD 80
           +S+KRY++
Sbjct: 821 KSKKRYRN 828

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>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
 Frame = -1

Query: 280 RSQRSGRPLLQFESESRAERNRGRE-----TRELVDYREAASQRDWWEKRVRIKLHKNPK 116
           R +  GR + +      AER RGRE      R     REA  QR+   +R R +  +  +
Sbjct: 72  RGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQRGREAERQR 131

Query: 115 LREGESQK 92
            RE E Q+
Sbjct: 132 GREAERQR 139

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>RS10_CHLCV (Q824F9) 30S ribosomal protein S10|
          Length = 105

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 10  LKTFDQLEAQRSFLLHIQTARRSHPDIVFGFPLPVV*DFYAIL 138
           LK FDQ +  RS    ++TA+R+   +    PLP   + Y +L
Sbjct: 12  LKGFDQGQLDRSTADIVETAKRTGARVAGPIPLPTKREVYTVL 54

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>YJIA_BACSU (O34679) Hypothetical protein yjiA precursor|
          Length = 92

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 249 SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE*NCIK 124
           S S++ E+   EG++ ENW  +V + + +I G +  E N +K
Sbjct: 26  SFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRLVEENKLK 67

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>LEU2_PSEU2 (Q4ZUZ6) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 474

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 303 ALLVALKPDRRGRGGHCCSLSQK 235
           ++ +A+ PDR G G HC S S +
Sbjct: 414 SMCLAMNPDRLGSGEHCASTSNR 436

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>LEU2_PSE14 (Q48K99) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 474

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 303 ALLVALKPDRRGRGGHCCSLSQK 235
           ++ +A+ PDR G G HC S S +
Sbjct: 414 SMCLAMNPDRLGSGEHCASTSNR 436

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>SEN2_RAT (Q5M954) tRNA-splicing endonuclease subunit Sen2 (EC 3.1.27.9)|
           (tRNA-intron endonuclease Sen2)
          Length = 463

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -1

Query: 250 QFESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLREGESQKRYQDGFF 71
           Q   ESRA         EL D +E A+  D   KR R+   +NP       Q   ++ FF
Sbjct: 245 QIAGESRAAHEYVLIEEELCDVQEGAAPHDELLKRKRLVCRRNPYRIFEYLQLSLEEAFF 304

Query: 70  AQF 62
             +
Sbjct: 305 LAY 307

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>LEU2_PSESM (Q884C2) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 475

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 303 ALLVALKPDRRGRGGHCCSLSQK 235
           ++ +A+ PDR G G HC S S +
Sbjct: 414 SMCLAMNPDRLGSGEHCASTSNR 436

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>AAT3_ARATH (P46644) Aspartate aminotransferase, chloroplast precursor (EC|
           2.6.1.1) (Transaminase A)
          Length = 449

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 264 GGHCCSLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE 139
           GG C      A+  G  GER+   SI+ K  + ++ GR ES+
Sbjct: 284 GGECLVAQSYAKNMGLYGERVGALSIVCK--SADVAGRVESQ 323

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>MLO11_ARATH (Q9FI00) MLO-like protein 11 (AtMlo11)|
          Length = 573

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
 Frame = +2

Query: 17  RSTSW----RRKEVFCCIFKLREEAILISFLAF-------PFP*FRIFMQFYSDSFLP 157
           R ++W    +RK +F  + K++EE +L+ F++              +   FY+D FLP
Sbjct: 46  RLSTWLRKTKRKPMFAALEKMKEELMLLGFISLLLTATSSTIANICVPSSFYNDRFLP 103

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>K1543_HUMAN (Q9P1Y5) Protein KIAA1543|
          Length = 1249

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 249  SLSQKAEQRGTEGERLENWSIIVKQQAREIGGRKESE 139
            SL ++ ++R  E  R + W  + K+Q RE   R   E
Sbjct: 905  SLLERQQRRAEEARRRKQWQEVEKEQRREEAARLAQE 941

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>PLSL_MOUSE (Q61233) Plastin-2 (L-plastin) (Lymphocyte cytosolic protein 1)|
           (LCP-1) (65 kDa macrophage protein) (pp65)
          Length = 627

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = -2

Query: 198 NWSIIVKQQAREIGGRKESE*NCIKILNYGKGKAKNDIRMASSRSLNMQQKTSLRLQLVE 19
           +W+ + K    ++GG  +   NC   ++ GK +AK  +   + + LN   +T L L LV 
Sbjct: 438 DWNRVNKPPYPKLGGNMKKLENCNYAVDLGKNQAKFSLVGIAGQDLNEGNRT-LTLALVW 496

Query: 18  RL 13
           +L
Sbjct: 497 QL 498

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>PRGR_CHICK (P07812) Progesterone receptor (PR)|
          Length = 786

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 101 KPKTISGWLLRAV*ICSRKLLCASSWSNV 15
           KP+T S  L     +C R+LLC   WS +
Sbjct: 560 KPETPSSLLTSLNHLCERQLLCVVKWSKL 588

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>SNUT2_MOUSE (Q3TIX9) U4/U6.U5 tri-snRNP-associated protein 2 (Inactive|
           ubiquitin-specific peptidase 39)
          Length = 564

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = -1

Query: 286 QTRSQRSGRPLLQFESESRAERNRGRETRELVDYREAASQRDWWEKRVRIKLHKNPKLRE 107
           +++ Q  G    + ESESR    R ++ R+     EAAS R      VR+K    P  RE
Sbjct: 4   RSKRQSHGSTRGKRESESRGSSGRIKKERDREKEPEAASSRG---SPVRVKREAEPAARE 60

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>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3511

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
 Frame = -2

Query: 354 TTMRVSKD*CLVEGDLEALLVALKPDRRGRG---GHCCSLS---------------QKAE 229
           T MRV K    ++G   + +V   P RRG G       SLS               +KAE
Sbjct: 85  TQMRVGKKKRAMKGKKPSFMVIRFPGRRGYGRLRPRAQSLSKASTAINWLTKKFLLKKAE 144

Query: 228 QRGTEGERLENWSIIVKQQAREIGGRKESE*NCIKILNYG 109
           + G+E   ++ W   +++ +  +G RK    +  +IL +G
Sbjct: 145 ESGSEQATVDAW---LQRSSSRVGSRKLPFPSGAEILRHG 181

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>TDRD4_HUMAN (Q9NUY9) Tudor domain-containing protein 4|
          Length = 633

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 6   SIEDVRPAGGAKKFSAAYSNC 68
           S+ D+RPAGG+ K++A   +C
Sbjct: 81  SLVDIRPAGGSDKWTATACDC 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,191,110
Number of Sequences: 219361
Number of extensions: 829572
Number of successful extensions: 2364
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2364
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result