ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet03f04 |
|---|---|
| Clone Library Name | barley_pub |
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/81 (32%), Positives = 38/81 (46%) Frame = +2 Query: 53 DQEGQAKGETKQGGWITLPFIAGSMLGLGLAINGTTSNLQIYLIKQYNVDSIDAAQIANI 232 D G + K G W PFI G+ LA G NL YL + + ++ AA Sbjct: 31 DFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTT 90 Query: 233 VRGSLNFVPVAGAILSDSYLG 295 +G+ P+ GA+L+D+Y G Sbjct: 91 WQGTCYLTPLIGAVLADAYWG 111
>GLPD1_MYCTU (P64182) Glycerol-3-phosphate dehydrogenase 1 (EC 1.1.99.5)| Length = 516 Score = 30.8 bits (68), Expect = 0.89 Identities = 13/56 (23%), Positives = 32/56 (57%) Frame = +2 Query: 89 GGWITLPFIAGSMLGLGLAINGTTSNLQIYLIKQYNVDSIDAAQIANIVRGSLNFV 256 GG + + I G + G+G+A++ T L + L++++++ + + +V G L ++ Sbjct: 24 GGALDVIVIGGGITGVGIALDAATRGLTVALVEKHDLAFGTSRWSSKLVHGGLRYL 79
>GLPD1_MYCBO (P64183) Glycerol-3-phosphate dehydrogenase 1 (EC 1.1.99.5)| Length = 516 Score = 30.8 bits (68), Expect = 0.89 Identities = 13/56 (23%), Positives = 32/56 (57%) Frame = +2 Query: 89 GGWITLPFIAGSMLGLGLAINGTTSNLQIYLIKQYNVDSIDAAQIANIVRGSLNFV 256 GG + + I G + G+G+A++ T L + L++++++ + + +V G L ++ Sbjct: 24 GGALDVIVIGGGITGVGIALDAATRGLTVALVEKHDLAFGTSRWSSKLVHGGLRYL 79
>HTR2_HALVA (P42258) Sensory rhodopsin II transducer (HTR-II) (Methyl-accepting| phototaxis protein II) (MPP-II) (Fragment) Length = 433 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = -3 Query: 316 GEDDREAAQVGVGEDGSGDR------DEIERAADDVGDLRRVDAVHVVLLDQVNLQVAGG 155 GED REAAQ + E + + +EI D++ ++ + V +++Q N+ Sbjct: 194 GEDGREAAQEAIAEMSAIEAETGETVEEINALDDELDEIGEIVGVITSIVEQTNMLALNA 253 Query: 154 SVDGQPQPKHAPGYEGKG 101 S++ HA G +G+G Sbjct: 254 SIEA----AHADG-DGEG 266
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 10/71 (14%) Frame = -3 Query: 307 DREAAQVGVGEDGSGDRDEIERAADDVGDLRRVDAVHVVLLDQV----------NLQVAG 158 DRE ++ V G R EI + DL D VH+ + DQV NL++ Sbjct: 227 DREKKKIIVQVTRDGSRQEIS-----IHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDE 281 Query: 157 GSVDGQPQPKH 125 S+ G+ +P H Sbjct: 282 SSLSGESEPSH 292
>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/98 (21%), Positives = 41/98 (41%) Frame = +2 Query: 20 ESSPRPEPKPSDQEGQAKGETKQGGWITLPFIAGSMLGLGLAINGTTSNLQIYLIKQYNV 199 E PRP P + G + +++ FI + + G + L +Y + + Sbjct: 21 EMLPRPPSPPKKSPPKIFGSSYP---VSIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHW 77 Query: 200 DSIDAAQIANIVRGSLNFVPVAGAILSDSYLGCFPVIL 313 + + + + F P+ GA ++DS+LG F I+ Sbjct: 78 NEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTII 115
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 10/71 (14%) Frame = -3 Query: 307 DREAAQVGVGEDGSGDRDEIERAADDVGDLRRVDAVHVVLLDQV----------NLQVAG 158 DRE ++ + G R E+ + DL D VH+ + DQV NL++ Sbjct: 227 DREKKKIIIQVTRDGSRQEVS-----IHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDE 281 Query: 157 GSVDGQPQPKH 125 S+ G+ +P H Sbjct: 282 SSLSGESEPSH 292
>Y1369_HAEIN (P45182) Hypothetical protein HI1369| Length = 839 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/81 (25%), Positives = 35/81 (43%) Frame = +2 Query: 17 MESSPRPEPKPSDQEGQAKGETKQGGWITLPFIAGSMLGLGLAINGTTSNLQIYLIKQYN 196 + S+P + SDQ G +GE K ++ING N Y + N Sbjct: 110 LRSNPHIRYENSDQNGFQRGEIKPE---------------NISINGADPNQSAYFVDNVN 154 Query: 197 VDSIDAAQIANIVRGSLNFVP 259 +++ D A ++I G++ VP Sbjct: 155 INN-DLAIDSSIFDGAMQVVP 174
>VCAP_BPT3 (P20324) Capsid assembly protein (Scaffolding protein)| Length = 310 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 7/37 (18%) Frame = -3 Query: 316 GEDDREAAQVGVGEDGS-------GDRDEIERAADDV 227 GEDD QV + EDG+ GD E+E +DV Sbjct: 69 GEDDEGRIQVRISEDGNEAGFDTDGDNSEVETEGEDV 105
>Y425_CAUCR (Q9AB09) Hypothetical UPF0324 membrane protein CC0425| Length = 465 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 8/48 (16%) Frame = +1 Query: 124 HAWAGAGHQRNHQQPADLP-----DQAVQRGQH---RRGADRQHRPRL 243 H W A R H+QP P +Q +++G+ RR R+HRPR+ Sbjct: 86 HPWRPALRLRAHRQPDRAPPARASEQPLRQGRRALRRRPDQRRHRPRM 133
>YL52_CAEEL (P34431) Hypothetical protein F44E2.2 in chromosome III| Length = 2186 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +1 Query: 115 SREHAWAGAGHQRNHQQPADLPDQAVQRGQHRRGADRQHRPRLAQ 249 SRE +W + HQ P+D QRG H ++ + +Q Sbjct: 524 SREQSWKTISVPQKHQNPSDRCSDCQQRGWHMFWCSKKSKDNASQ 568
>NANO3_MOUSE (P60324) Nanos homolog 3| Length = 178 Score = 28.5 bits (62), Expect = 4.4 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 8 EAEMESSPRPEPKPSDQEGQAKGET 82 E ++ P+PEPKPS + QA E+ Sbjct: 25 ELDVRLDPKPEPKPSSESQQASKES 49
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Frame = +1 Query: 64 ASEGRDEARRMDHPSLHSREHAWAGAGHQRNHQQPADLPDQAVQRGQHRRGA-------D 222 A +G D RR P HSR+ GA H+ ++ +R +HR GA D Sbjct: 309 APQGEDSERRETPPRPHSRKRRDTGAHHRHWRRRR--------RRVRHREGALPAAHPDD 360 Query: 223 RQHRPRLA 246 R+ R R A Sbjct: 361 RRRRRRRA 368
>RILP_HUMAN (Q96NA2) Rab-interacting lysosomal protein| Length = 401 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +1 Query: 43 QAIRPRRASEGRDEARRMDHPSLHSREHAWAGAGHQRNHQQPADLPDQ 186 +A P+ R +A R H E A AGAG N + PA+ Q Sbjct: 184 EAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQ 231
>Y1303_MYCBO (P63398) Hypothetical ABC transporter ATP-binding protein Mb1303c| Length = 631 Score = 28.5 bits (62), Expect = 4.4 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%) Frame = +2 Query: 14 EMESSPRPEPKPSDQEGQAKGETKQGGWIT-LPFIAGSML----GLGLAINGTT----SN 166 E E SP PEP+ + G+ + E ++ P I L G +AI G T + Sbjct: 379 EPEESPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTT 438 Query: 167 LQIYLIKQYNVDS----IDAAQIANIVRGSLNFVPVAGAILSDSYL 292 L L++ Y + S ID IA++ R SL G +L D++L Sbjct: 439 LVNLLMRFYEIGSGRILIDGVDIASVSRQSLR--SRIGMVLQDTWL 482
>Y1272_MYCTU (P63397) Hypothetical ABC transporter ATP-binding protein| Rv1272c/MT1310 Length = 631 Score = 28.5 bits (62), Expect = 4.4 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%) Frame = +2 Query: 14 EMESSPRPEPKPSDQEGQAKGETKQGGWIT-LPFIAGSML----GLGLAINGTT----SN 166 E E SP PEP+ + G+ + E ++ P I L G +AI G T + Sbjct: 379 EPEESPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTT 438 Query: 167 LQIYLIKQYNVDS----IDAAQIANIVRGSLNFVPVAGAILSDSYL 292 L L++ Y + S ID IA++ R SL G +L D++L Sbjct: 439 LVNLLMRFYEIGSGRILIDGVDIASVSRQSLR--SRIGMVLQDTWL 482
>PRMA_PHOLL (P60092) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 296 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 149 NGTTSNLQIYLIKQYNVDSIDAAQIANIVRGSL-NFVPVAGAI 274 NG +L +YL K D IANI+ G L PV GA+ Sbjct: 204 NGVLEHLTLYLAKNTPTDLESDVVIANILAGPLRELAPVIGAL 246
>ZO2_CANFA (Q95168) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1174 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +1 Query: 52 RPRRASEGRDEARRMDHPSLHSREHAWAGAGHQRNHQQPADLP-DQAVQRGQHRRGADRQ 228 RPR S GR R +DH + R +R+H D D+ RG + RG DR Sbjct: 186 RPRERSRGRSLERGLDHDDDYGRP-------GERSHGMSTDRGYDRGYDRG-YDRGYDRT 237 Query: 229 HRP 237 + P Sbjct: 238 YSP 240
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +1 Query: 73 GRDEARRMDHPSLHSREHAWAGAGHQRNHQQPADLPD---QAVQRG 201 GR+ A + H + S + + HQ+ HQ P LP AV RG Sbjct: 41 GRNRASNVPHDHVSS-----SASNHQQEHQSPTSLPSSKWHAVSRG 81
>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 28.1 bits (61), Expect = 5.7 Identities = 22/98 (22%), Positives = 39/98 (39%) Frame = +2 Query: 20 ESSPRPEPKPSDQEGQAKGETKQGGWITLPFIAGSMLGLGLAINGTTSNLQIYLIKQYNV 199 E PRP P G +++ FI + + G + L +Y + + Sbjct: 21 EVPPRPPSPPKKPSPTICGSNYP---LSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHW 77 Query: 200 DSIDAAQIANIVRGSLNFVPVAGAILSDSYLGCFPVIL 313 + + I + F P+ GA ++DS+LG F I+ Sbjct: 78 NEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTII 115
>UBE3A_HUMAN (Q05086) Ubiquitin-protein ligase E3A (EC 6.3.2.-) (E6AP| ubiquitin-protein ligase) (Oncogenic protein-associated protein E6-AP) (Human papillomavirus E6-associated protein) (NY-REN-54 antigen) Length = 875 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -3 Query: 319 AGEDDREAAQVGVGEDGSGDRDEIERAADDVG-DLRRVDAVHVVLLDQVNLQVA 161 A E+D EA+ +G+ GD + + DDV D+ + V+ LL ++ A Sbjct: 202 AMEEDSEASSSRIGDSSQGDNNLQKLGPDDVSVDIDAIRRVYTRLLSNEKIETA 255
>GLMM_PSYAR (Q4FS01) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 455 Score = 28.1 bits (61), Expect = 5.7 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -3 Query: 295 AQVGVGEDGSGDRDEIERAADDVGDLRRVDAVHVVLLDQVNLQVAG 158 A VG+ DG GDR + D+ G L D + VL Q +VAG Sbjct: 246 ADVGIALDGDGDRIVM---VDEAGHLVDGDGILYVLATQGQTKVAG 288
>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3| Length = 1580 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = +1 Query: 103 PSLHSREHAWAGAGHQ--RNHQQPADLPDQAVQRGQH--RRGADRQHRPRLAQF 252 P +H+ G H R H QP D P V+R R G++ PR+ +F Sbjct: 971 PPVHAPRRCSDGGAHGYGRRHLQPHDAPGHGVRRASDPVRTGSEGLALPRVPRF 1024
>CP52I_CANMA (Q12586) Cytochrome P450 52A9 (EC 1.14.14.-) (CYPLIIA9)| (Alkane-inducible P450-ALK5-A) Length = 521 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 Query: 35 PEPKPSDQEGQAKGETKQGGWITLPFIAGSMLGLG 139 P+ + + + +K ETK+ GW LPF G + LG Sbjct: 436 PDARLFNPDRWSKPETKKLGWAFLPFNGGPRICLG 470
>BETP_CORGL (P54582) Glycine betaine transporter betP| Length = 595 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 77 ETKQGGWITLPFIAGSMLGLGLAINGTTSNLQIY 178 E + WI++ F AG +G+GL GTT L Y Sbjct: 135 EFRTVSWISMMFAAG--MGIGLMFYGTTEPLTFY 166
>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)| (Tripartite motif protein 33) Length = 1142 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 115 SREHAWAGAGHQRNHQQPADLPDQAVQRGQHRRGADRQHRPRLAQ 249 +++H A Q P + Q +QRG GA + H+ RLAQ Sbjct: 566 TQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQ 610
>RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (RGP3)| Length = 1198 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = -3 Query: 325 GCAG--EDDREAAQVGVGEDGSGDRDEIERAADD 230 GC+G ED EA +V GE+G D D E +DD Sbjct: 874 GCSGDEEDAEEAEEVEEGEEGEEDED--EDTSDD 905
>LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = +1 Query: 55 PRRASEGRDEARRMDHPSLHSREHAWAGAG----HQRNHQQPADLPDQAVQRGQHRRGAD 222 P RA+ R R HP +H + G +RN P P + ++R +HRR D Sbjct: 46 PGRANVARGCQHR--HPGPQRADHPGSPVGGRRHRRRNLAHPGADPGRELRRVRHRRVQD 103 Query: 223 RQHRPRLAQFRPC 261 + P RPC Sbjct: 104 ERPAP---GHRPC 113
>BIOD_STRCO (Q9FCC1) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin| synthase) (DTB synthetase) (DTBS) Length = 238 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 301 EAAQVGVGEDGSGDRDEIERAA 236 +AAQ GVG D +GD E+ R A Sbjct: 37 KAAQTGVGPDEAGDAQEVARLA 58
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/48 (27%), Positives = 20/48 (41%) Frame = +1 Query: 88 RRMDHPSLHSREHAWAGAGHQRNHQQPADLPDQAVQRGQHRRGADRQH 231 ++M H L +H Q+ HQQ Q Q+ H++ QH Sbjct: 179 QQMQHHQLQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHHQQQQHHQH 226
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 115 SREHAWAGAGHQRNHQQPADLPDQAVQRGQHRRGADRQHRPRLAQ 249 +++H A Q P + Q +QRG GA + H+ RLAQ Sbjct: 550 TQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQ 594
>CLPB_CHLPN (Q7AJA9) Chaperone clpB| Length = 866 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -3 Query: 247 ERAADDVGDLRRVDAVHVVLLDQVNLQVAGGSVDG 143 ER + D+ D H++ +D+V+ V G+ DG Sbjct: 256 ERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDG 290
>AMPS_BACSU (P39762) Aminopeptidase ampS (EC 3.4.11.-)| Length = 410 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = +1 Query: 118 REHAWAGAG--HQRNHQQPADLPDQAVQRGQHRRGAD 222 R+H WAGAG ++ H+ A++P + V + G D Sbjct: 225 RKHVWAGAGSVNESGHEFMANMPTEEVFTLPQKDGVD 261
>BSCL2_RAT (Q5FVJ6) Seipin (Bernardinelli-Seip congenital lipodystrophy type 2| protein homolog) Length = 377 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = +2 Query: 8 EAEMESSPRPEPKPSDQEGQAKGETKQGGW 97 E ++ +PE +P + EG+ + E G W Sbjct: 317 EGQLSEEEKPEKQPLNGEGEQEPEASDGSW 346
>EZY1_CHLRE (Q08354) Ezy-1 protein precursor| Length = 453 Score = 27.3 bits (59), Expect = 9.8 Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 10/52 (19%) Frame = -3 Query: 298 AAQVGVGEDG----SGDRDEIERAADDVGD------LRRVDAVHVVLLDQVN 173 AA VG G DG SGDRD + AAD GD LR VH L D N Sbjct: 160 AAVVGTGSDGGGDESGDRDTAD-AADADGDGGERAWLRFKADVHACLADLRN 210
>GOGA2_MOUSE (Q921M4) Golgin subfamily A member 2 (Cis-Golgi matrix protein| GM130) Length = 888 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +2 Query: 11 AEMESSPRPEPK--PSDQEGQAKGETKQ 88 ++ME P PEP PS+ E Q +GE +Q Sbjct: 333 SQMEEPPPPEPPAGPSEAEEQLQGEVEQ 360
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG| repeat protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 38 EPKPSDQEGQAKGETKQGGW 97 +PKP+ + G +KG QGGW Sbjct: 785 DPKPALRWGDSKGSNCQGGW 804
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = +2 Query: 8 EAEMESSPRPEPKPSDQEGQAKGETKQGGWITLPFIAGSMLG 133 E E E P PEP+P + G E W + I LG Sbjct: 16 EPEPEPEPAPEPEPEPKPGAGTSEAFSRLWTDVMGILDGSLG 57
>KAPP_ARATH (P46014) Kinase-associated protein phosphatase (EC 3.1.3.16)| Length = 581 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 86 QGGWITLPFIAGSMLGLGLAINGTTSN 166 Q W+ L IAG +GL A+N T+S+ Sbjct: 178 QRSWLFLEVIAGPAIGLQHAVNSTSSS 204
>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 27.3 bits (59), Expect = 9.8 Identities = 24/79 (30%), Positives = 34/79 (43%) Frame = +1 Query: 1 SGRSRDGELAET*AQAIRPRRASEGRDEARRMDHPSLHSREHAWAGAGHQRNHQQPADLP 180 SGR G E + RPR +++G +R H + R A +G+G + P Sbjct: 201 SGRGHQGAHQEQGRDSARPRGSNQGHSSSR---HQADSPRVSARSGSGGR------GQSP 251 Query: 181 DQAVQRGQHRRGADRQHRP 237 D A R +RR RQ P Sbjct: 252 D-ASGRSSNRRDRPRQPSP 269
>H2AW_HUMAN (Q9P0M6) Core histone macro-H2A.2 (Histone macroH2A2) (mH2A2)| Length = 371 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/53 (26%), Positives = 28/53 (52%) Frame = +2 Query: 11 AEMESSPRPEPKPSDQEGQAKGETKQGGWITLPFIAGSMLGLGLAINGTTSNL 169 A+ +S + +PK SD+EG + ++ G ++ L LG ++ T S++ Sbjct: 151 AKPRTSKKSKPKDSDKEGTSNSTSEDGPGDGFTILSSKSLVLGQKLSLTQSDI 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,095,598 Number of Sequences: 219361 Number of extensions: 813289 Number of successful extensions: 4616 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4195 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4550 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
